Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1736 |
Symbol | |
ID | 6110682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 1932335 |
End bp | 1933135 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641621527 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001748609 |
Protein GI | 170720921 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.78404 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.23922 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATAC GCAAGACGCT GGCCCTGCTG CTTTACTTCT TCTTCCTGCT GGTGCCGATC TACTGGCTGC TGAACATGTC GTTCAAGAGC AACACCGAGA TTCTCGGTGG CCTCACCCTT TGGCCGCAGG CGTTCACCTT AGACAACTAC CGGGTTATCT TCACTGATGC CAGTTGGTAC AGCGGCTACA TCAACTCGCT GTACTACGTG TGCCTCAACA CACTGATTTC ACTGCTGGTG GCGTTGCCGG CGGCCTACGC CTTCTCGCGC TACCGCTTCC TCGGTGACCG CCACCTGTTC TTCTGGTTAC TGACCAACCG CATGGCGCCA CCTGCGGTGT TTCTGCTGCC GTTCTTTCAG CTCTATTCGT CCATCGGTCT GTTCGATACC CACATTGCCG TTGCCCTGGC CCACTGCCTG TTCAACGTGC CGCTGGCAGT TTGGATTCTC GAAGGGTTCA TGTCGGGCGT GCCGAAGGAA ATCGATGAAA CCGCCTACAT CGATGGTTAC AGCTTCCCGC GTTTCTTCGT GAAGATCTTT ATCCCGTTGA TCGGCTCCGG CATCGGCGTG ACGGCGTTTT TCTGCTTCAT GTTTTCCTGG GTCGAGCTGT TGCTGGCGCG CACCCTGACC TCGGTGAATG CCAAGCCGAT TGCCGCCGTG ATGACCCGCA CGGTGTCTGC TTCGGGCATC GACTGGGGCG TACTGGCGGC GGCGGGGGTG CTGACTATCC TGCCGGGCAT GCTGGTGATC TGGTTCGTTC GCAACCATGT GGCCAAGGGC TTTGCCCTGG GCCGGGTGTG A
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Protein sequence | MSIRKTLALL LYFFFLLVPI YWLLNMSFKS NTEILGGLTL WPQAFTLDNY RVIFTDASWY SGYINSLYYV CLNTLISLLV ALPAAYAFSR YRFLGDRHLF FWLLTNRMAP PAVFLLPFFQ LYSSIGLFDT HIAVALAHCL FNVPLAVWIL EGFMSGVPKE IDETAYIDGY SFPRFFVKIF IPLIGSGIGV TAFFCFMFSW VELLLARTLT SVNAKPIAAV MTRTVSASGI DWGVLAAAGV LTILPGMLVI WFVRNHVAKG FALGRV
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