Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2984 |
Symbol | |
ID | 8020666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 3147283 |
End bp | 3148113 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644831781 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002982926 |
Protein GI | 241664566 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAAGA ACAACAACAA CGAACACCAG CGCAAGATCG CCCGCGCGAT CACGCTGGCG GTGTATGTGG CATTTGCCGT GCTGCCGCTG TACTGGATGC TGAGCATGTC GCTCAAGACC AACGAGGAGA CGCTGGCCGG CTTCTCGATC TGGCCGAAGC TCGTCACGTT CGACAACTAC AAGATCATCT TCACCGACCC GTCGTGGTAC TGGGGTTACA TCAACTCCAT CATCTACGTG ACGATGAACA CGGTGCTCTC GACCGTGGTA GCGCTGCCGG CGGCCTACGC CTTCTCGCGC TACCGCTTCC TGGGCGACAA GCACATGTTC TTCTGGCTAC TGACGAACCG CATGACGCCG CCCGCGGTGT TCCTGCTGCC CTTCTTCCAG CTGTATTCGA CGGTCGGCCT GATGGACACG CACCTGGGCG TGGCGCTGGC GCACATGCTG TTCAACGTGC CACTGGCGGT GTGGATTCTC GAAGGCTTCA TGTCGGGCAT CCCGCGTGAG ATTGACGAGA CGGCCTACAT CGACGGCTAC AGCTTCCCCA AGTTCTTCCT AAAGATCTTC CTGCCCCTCA TCAAGGCAGG CGTGGGTGTG ACTGCGTTCT TCTGCTTCAT GTTCAGCTGG GTGGAACTGC TGCTCGCGCG CACGCTCACC TCGGTCGATG CCAAACCCAT CACCGCGGTG ATGACGCGCA CGGTGTCGGC CTCGGGCATG GATTGGGGCG TGCTGGCTGC AGCCGGTGTG CTGACGATCA TTCCGGGTGC GCTGGTGATC TGGTTTGTGC GGAACTACAT CGCGAAGGGT TTCGCGATGG GCCGCGTCTA A
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Protein sequence | MPKNNNNEHQ RKIARAITLA VYVAFAVLPL YWMLSMSLKT NEETLAGFSI WPKLVTFDNY KIIFTDPSWY WGYINSIIYV TMNTVLSTVV ALPAAYAFSR YRFLGDKHMF FWLLTNRMTP PAVFLLPFFQ LYSTVGLMDT HLGVALAHML FNVPLAVWIL EGFMSGIPRE IDETAYIDGY SFPKFFLKIF LPLIKAGVGV TAFFCFMFSW VELLLARTLT SVDAKPITAV MTRTVSASGM DWGVLAAAGV LTIIPGALVI WFVRNYIAKG FAMGRV
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