Gene Pden_4389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4389 
Symbol 
ID4582939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1583515 
End bp1584318 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content62% 
IMG OID639771696 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_918149 
Protein GI119387094 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.998448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.127678 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTCA AACCCTCTGC CCTGGTGATG GTGCTCTACC TGCTGTTCCT GCTGATCCCG 
ATCTACTGGC TGGTCAACAT GAGCCTGAAG ACCAATGCCG AGATCACCGG CACCTTCAGC
CTCTACCCGC ACAACCTGAC GCTGCGGAAC TATCGGGTGA TCCTGACCGA TCCCAGCTGG
TACATGGGCT ATGTGAACTC GATCATCTAC GTGGTGATGA ACACGGTGAT CTCGATCGCC
GTGGCGCTGC CCGCCGCCTA TGCCTTCAGC CGCTACAGCT TCATGGGCGA CAAGCACCTG
TTCTTCTGGC TGCTGACCAA CCGCATGTCG CCGCCGGCGG TCTTTGCGCT GCCCTTCTTC
CAGCTTTATT CCTCGGTCGG GCTGTTCGAC ACGCATATCG CGGTGGCGCT GGCGCATTGC
CTCTTCAACG TGCCGCTGGC GGTCTGGATC CTGGAAGGCT TCATGCGCGG CGTGCCCAAG
GAGATCGACG AGACCGCCTA TATCGACGGC TACAGCTTCC CACGCTTCTT CGTGAAGATC
TTCATGCCGC TGATCGCGAG CGGAATCGGG GTCGCCGCCT TCTTCTGCTT CATGTTCAGC
TGGGTCGAGC TGCTTTTGTC GCGCACGCTG ACCTCGGTGA ACGCCAAGCC CATCGCGGCG
ACGATGACGC GCACCGTCTC GGCCTCGGGC ATGGACTGGG GCGTGCTGGC GGCGGCGGGG
GTGCTGACCA TCATCCCCGG CGCGCTGGTG ATCTGGTTTG TCCGCAACTA CATCGCCAAG
GGCTTTGCCC TGGGGAGGGT CTGA
 
Protein sequence
MRVKPSALVM VLYLLFLLIP IYWLVNMSLK TNAEITGTFS LYPHNLTLRN YRVILTDPSW 
YMGYVNSIIY VVMNTVISIA VALPAAYAFS RYSFMGDKHL FFWLLTNRMS PPAVFALPFF
QLYSSVGLFD THIAVALAHC LFNVPLAVWI LEGFMRGVPK EIDETAYIDG YSFPRFFVKI
FMPLIASGIG VAAFFCFMFS WVELLLSRTL TSVNAKPIAA TMTRTVSASG MDWGVLAAAG
VLTIIPGALV IWFVRNYIAK GFALGRV