59 homologs were found in PanDaTox collection
for query gene Rleg2_6367 on replicon NC_011371
Organism: Rhizobium leguminosarum bv. trifolii WSM2304



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011371  Rleg2_6367  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  100 
 
 
288 aa  566  1e-160  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.707828  normal  0.820897 
 
 
-
 
NC_012852  Rleg_6188  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  84.64 
 
 
282 aa  444  1.0000000000000001e-124  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.465928  normal  0.388125 
 
 
-
 
NC_009485  BBta_4160  hypothetical protein  51.34 
 
 
272 aa  225  5.0000000000000005e-58  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.911147 
 
 
-
 
NC_006670  CNA01130  conserved hypothetical protein  39.66 
 
 
316 aa  177  3e-43  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.174189  n/a   
 
 
-
 
NC_010505  Mrad2831_1794  phosphogluconate dehydrogenase, NAD-binding, putative-like protein  46.74 
 
 
280 aa  166  2.9999999999999998e-40  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0510209 
 
 
-
 
NC_007413  Ava_4075  6-phosphogluconate dehydrogenase, NAD-binding  37.69 
 
 
299 aa  138  1e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.546108 
 
 
-
 
NC_009921  Franean1_2354  putative dehydrogenase  35.25 
 
 
291 aa  124  2e-27  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0342021 
 
 
-
 
NC_007777  Francci3_1825  hypothetical protein  30.61 
 
 
284 aa  81.3  0.00000000000002  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_1359  6-phosphogluconate dehydrogenase, NAD-binding  27.34 
 
 
296 aa  73.9  0.000000000003  Pseudomonas putida F1  Bacteria  normal  0.234079  normal  0.110922 
 
 
-
 
NC_011892  Mnod_8622  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  33.87 
 
 
300 aa  63.2  0.000000006  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.489612  n/a   
 
 
-
 
NC_007925  RPC_2716  NADP oxidoreductase, coenzyme F420-dependent  28.89 
 
 
304 aa  62.8  0.000000007  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.336129  normal 
 
 
-
 
NC_010511  M446_5621  phosphogluconate dehydrogenase, NAD-binding, putative-like protein  30.08 
 
 
304 aa  62.4  0.000000009  Methylobacterium sp. 4-46  Bacteria  normal  0.786606  normal 
 
 
-
 
NC_010505  Mrad2831_4139  phosphogluconate dehydrogenase, NAD-binding, putative-like protein  30.36 
 
 
302 aa  61.2  0.00000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.847041  normal 
 
 
-
 
NC_009832  Spro_2089  phosphogluconate dehydrogenase, NAD-binding, putative-like protein  28.4 
 
 
295 aa  59.7  0.00000005  Serratia proteamaculans 568  Bacteria  normal  0.891235  normal 
 
 
-
 
NC_010501  PputW619_1455  phosphogluconate dehydrogenase, NAD-binding, putative-like protein  29.12 
 
 
298 aa  58.9  0.00000008  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_011892  Mnod_8322  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  28.05 
 
 
304 aa  56.2  0.0000005  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0469353  n/a   
 
 
-
 
BN001301  ANIA_06135  conserved hypothetical protein  28.95 
 
 
137 aa  55.5  0.000001  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
NC_008578  Acel_1045  6-phosphogluconate dehydrogenase, NAD-binding  31.63 
 
 
305 aa  54.7  0.000002  Acidothermus cellulolyticus 11B  Bacteria  normal  0.0255982  normal  0.0907231 
 
 
-
 
NC_008781  Pnap_2165  6-phosphogluconate dehydrogenase, NAD-binding  27.18 
 
 
299 aa  53.1  0.000005  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.328451  normal  0.0994663 
 
 
-
 
NC_007794  Saro_2815  6-phosphogluconate dehydrogenase, NAD-binding  29.39 
 
 
277 aa  52.4  0.000008  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.256633  n/a   
 
 
-
 
NC_008254  Meso_1079  6-phosphogluconate dehydrogenase, NAD-binding  25.67 
 
 
300 aa  52.4  0.000009  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_3786  6-phosphogluconate dehydrogenase, NAD-binding protein  34.59 
 
 
293 aa  52  0.00001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.622459  n/a   
 
 
-
 
NC_011662  Tmz1t_3295  2-hydroxy-3-oxopropionate reductase  31.5 
 
 
293 aa  51.2  0.00002  Thauera sp. MZ1T  Bacteria  normal  0.168978  n/a   
 
 
-
 
NC_008786  Veis_3257  6-phosphogluconate dehydrogenase, NAD-binding  25.46 
 
 
293 aa  50.4  0.00003  Verminephrobacter eiseniae EF01-2  Bacteria  hitchhiker  0.00764055  normal  0.245647 
 
 
-
 
NC_010524  Lcho_3634  phosphogluconate dehydrogenase, NAD-binding,-like protein  29.61 
 
 
313 aa  50.1  0.00004  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.75811 
 
 
-
 
NC_009972  Haur_1907  3-hydroxyisobutyrate dehydrogenase  27.01 
 
 
301 aa  50.1  0.00004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00339906  n/a   
 
 
-
 
NC_011004  Rpal_5180  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  24.06 
 
 
309 aa  50.1  0.00005  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0601  6-phosphogluconate dehydrogenase, NAD-binding  26.94 
 
 
288 aa  49.7  0.00006  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0286951  normal  0.472195 
 
 
-
 
NC_013947  Snas_1568  6-phosphogluconate dehydrogenase NAD-binding protein  32.85 
 
 
293 aa  49.3  0.00008  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1131  Dimethylmenaquinone methyltransferase  28.23 
 
 
450 aa  48.9  0.00009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0875  6-phosphogluconate dehydrogenase, NAD-binding  25.67 
 
 
309 aa  48.5  0.0001  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.651472  normal  0.39983 
 
 
-
 
NC_013757  Gobs_2243  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  30.33 
 
 
262 aa  48.1  0.0002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1297  2-hydroxy-3-oxopropionate reductase  29.66 
 
 
294 aa  47.8  0.0002  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2699  dehydrogenase  25.59 
 
 
312 aa  48.1  0.0002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.647846  normal  0.600019 
 
 
-
 
NC_007604  Synpcc7942_1857  3-hydroxyacid dehydrogenase  26.91 
 
 
288 aa  47.4  0.0003  Synechococcus elongatus PCC 7942  Bacteria  normal  0.341144  normal 
 
 
-
 
NC_008576  Mmc1_1681  6-phosphogluconate dehydrogenase, NAD-binding  30.43 
 
 
284 aa  47  0.0004  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.0000300681  normal  0.498538 
 
 
-
 
NC_009636  Smed_2232  6-phosphogluconate dehydrogenase NAD-binding  27.19 
 
 
288 aa  46.6  0.0005  Sinorhizobium medicae WSM419  Bacteria  normal  0.670475  normal 
 
 
-
 
NC_008254  Meso_1049  6-phosphogluconate dehydrogenase, NAD-binding  25 
 
 
294 aa  45.8  0.0007  Chelativorans sp. BNC1  Bacteria  normal  0.0780774  n/a   
 
 
-
 
NC_007908  Rfer_0336  6-phosphogluconate dehydrogenase, NAD-binding  25.81 
 
 
308 aa  45.8  0.0008  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010085  Nmar_0635  2-hydroxy-3-oxopropionate reductase  25.86 
 
 
292 aa  45.4  0.001  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_008705  Mkms_3768  6-phosphogluconate dehydrogenase, NAD-binding  31.94 
 
 
272 aa  45.1  0.001  Mycobacterium sp. KMS  Bacteria  normal  normal  0.921478 
 
 
-
 
NC_013947  Snas_2547  2-hydroxy-3-oxopropionate reductase  24.68 
 
 
294 aa  45.4  0.001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0672659  normal  0.0978001 
 
 
-
 
NC_013946  Mrub_2676  Phosphogluconate dehydrogenase NAD-binding, putative  30.99 
 
 
262 aa  45.1  0.001  Meiothermus ruber DSM 1279  Bacteria  normal  0.607685  normal  0.076232 
 
 
-
 
NC_008146  Mmcs_3695  6-phosphogluconate dehydrogenase, NAD-binding protein  31.94 
 
 
272 aa  45.1  0.001  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7576  6-phosphogluconate dehydrogenase, NAD-binding  28.75 
 
 
298 aa  44.3  0.002  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3343  6-phosphogluconate dehydrogenase NAD-binding  25.34 
 
 
303 aa  44.3  0.002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4518  3-hydroxyisobutyrate dehydrogenase  28.07 
 
 
308 aa  43.9  0.003  Frankia sp. EAN1pec  Bacteria  normal  0.431597  normal 
 
 
-
 
NC_009484  Acry_2697  3-hydroxyisobutyrate dehydrogenase  26.34 
 
 
290 aa  43.5  0.004  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4431  6-phosphogluconate dehydrogenase NAD-binding  30.4 
 
 
286 aa  43.5  0.004  Delftia acidovorans SPH-1  Bacteria  normal  0.182897  normal  0.586464 
 
 
-
 
NC_008010  Dgeo_2614  2-hydroxy-3-oxopropionate reductase  24.71 
 
 
300 aa  43.1  0.005  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_5740  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  26.14 
 
 
301 aa  43.1  0.005  Variovorax paradoxus S110  Bacteria  normal  0.659534  n/a   
 
 
-
 
NC_011831  Cagg_3456  6-phosphogluconate dehydrogenase NAD-binding  27.84 
 
 
291 aa  43.1  0.005  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.236209  normal  0.0188789 
 
 
-
 
NC_011726  PCC8801_1305  3-hydroxyisobutyrate dehydrogenase  25.13 
 
 
299 aa  43.1  0.005  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_3990  6-phosphogluconate dehydrogenase, NAD-binding  25.32 
 
 
303 aa  43.5  0.005  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2366  3-hydroxyisobutyrate dehydrogenase  28.23 
 
 
301 aa  43.1  0.006  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009524  PsycPRwf_1731  6-phosphogluconate dehydrogenase, NAD-binding  26.27 
 
 
309 aa  42.4  0.008  Psychrobacter sp. PRwf-1  Bacteria  hitchhiker  0.00369666  normal 
 
 
-
 
NC_008243  Meso_4460  2-hydroxy-3-oxopropionate reductase  27.17 
 
 
294 aa  42.4  0.008  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_2413  6-phosphogluconate dehydrogenase, NAD-binding  26.06 
 
 
289 aa  42.4  0.009  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A2462  2-hydroxy-3-oxopropionate reductase  28.16 
 
 
302 aa  42.4  0.01  Burkholderia xenovorans LB400  Bacteria  normal  0.394551  normal  0.60461 
 
 
-
 
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