| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1297 |
|---|
| Symbol | |
|---|
| ID | 7085462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 1427656 |
|---|
| End bp | 1428540 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643698314 |
|---|
| Product | 2-hydroxy-3-oxopropionate reductase |
|---|
| Protein accession | YP_002354952 |
|---|
| Protein GI | 217969718 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01505] 2-hydroxy-3-oxopropionate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAACA TCGGATTCAT CGGCCTCGGC ATCATGGGCA CCCCCATGGC AGGCAACCTG
ATCAAGGGCG GCCACACCGT CTTCACCCAC ACCCGCGGCG ACACCCCGGC CGTGCTCGTC
GAGGCCGGTG CCCGCCCCTG CGCGAGCGGC GCCGAGGTCG CGCGCCAGGC CGACATCGTC
ATCACCATGG TGCCCGACAC CCCGCACGTC GAGGACGTGC TCTTCAGCCC CGGAGGCGTC
GCCGCCGGCC TGTCGAAGGG CAAGATCGTG GTCGACATGA GCTCGATCTC TCCGGTCGCC
ACCAAGGACT TCGCCGCCCG CATCAACGCG CTCGGCTGCG AATACCTCGA CGCCCCGGTC
TCGGGCGGCG AGGTCGGCGC CAAGGCGGCG ACGCTCACCA TCATGGTCGG CGGCAGCCAG
GCCGCCTTCG ACAAGGTGAA GCCGATCTTC GATCTGATGG GCAAGAACAT CACCCTGGTC
GGCGGCAACG GCGACGGCCA GATCACCAAG GTCGCCAACC AGATCATCGT CGCGCTCAAC
ATCGAGGCGG TGGGCGAGGC CCTGCTGCTC GCCGCCAAGG CCGGCGCCGA TCCGGCCAAG
GTGCGCCAGG CGCTGATGGG CGGCTTCGCC AACTCGCGCA TCCTCGAGGT GCACGGCGAG
CGCATGGTCA AGCGCACCTT CGACCCCGGC TTCCGCATCG AGCTGCACCA GAAGGACCTC
AACCTCGCGC TGACCACCGC GCGCCAGCTC GGCGTGTCGC TGCCCAACAC CGCCACCGCG
CAGGAGCTCT TCAACGCCTG CAGCGCGCAC GGCGGTGCGA AGTGGGACCA CTCGGCGATG
GTGCGCGCGC TGGAGAAGAT GGCCAACTTC GAGATCGGCC AGTAA
|
|---|
| Protein sequence | MANIGFIGLG IMGTPMAGNL IKGGHTVFTH TRGDTPAVLV EAGARPCASG AEVARQADIV
ITMVPDTPHV EDVLFSPGGV AAGLSKGKIV VDMSSISPVA TKDFAARINA LGCEYLDAPV
SGGEVGAKAA TLTIMVGGSQ AAFDKVKPIF DLMGKNITLV GGNGDGQITK VANQIIVALN
IEAVGEALLL AAKAGADPAK VRQALMGGFA NSRILEVHGE RMVKRTFDPG FRIELHQKDL
NLALTTARQL GVSLPNTATA QELFNACSAH GGAKWDHSAM VRALEKMANF EIGQ
|
|---|
| |