Gene Mmc1_1681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1681 
Symbol 
ID4481701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2083312 
End bp2084166 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content56% 
IMG OID639722424 
Product6-phosphogluconate dehydrogenase, NAD-binding 
Protein accessionYP_865596 
Protein GI117924979 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000300681 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.498538 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAG GCGTCATTGG GTTGGGTGCG ATGGGGTGGG GCATGGCCAT GAATCTGCAC 
CGGGCCAACC TGTTGGAAGC TGTCTGGAAC CGTACCATCA GCCGTGCCCA TGCCTTTGAA
GCCCAATCTG GTGTGGTGGT GGCAAGTGAC CCCGCAACTT TGGCGGCCCG TTGTGAGGTG
ATCCTGACAT GCGTTTCGGA GGATAAAGAT CTGTTTGAGG TGGTGGATAA GCTGTTGGCC
GGTCTCGCCC CCGGTAAAGT GGTGATGGAT TGTTCCACCG TTGACCCGCA AACGGCGGTC
TGCTGTGCAG AGCGCCTAGC GAACAAGCAG GTGGCGTTTT TGGATGCTCC CGTCACCGGT
GGGGTGGAAG GGGCGCAAAA GGGTACCCTT TCCATGATGA TCGGTGGGGA TGCTCGCGTG
CTGGAGCGCA TAATGCCCCT GCTCAAGCCC ATCACCGCCC ATGTCACCCA TATGGGGCCT
GTGGGCAGTG GGCAAAAGGC CAAAGCGGTC AACCAAGTGA TGGTGGCAGG CATCAACCAA
GCGGTGACAC AAGCCCTGGC GTTGGGGCAA TCGCTCGATT TACCCCTCAC CAAATTGATA
GGTGCGATCG CTGGTGGGGC TGCGGGCAAC TGGTTCTTGG ACCATAGAGG ATTATCTATG
GTGGAGAACC AATTTACCGC AGGTTTTAAA GTAGCCCACC ATTTAAAAGA TCTTAGAATT
TGCCGCGCCC TCACAACCGA GGCAGGCCTT GAGGATACTT TTCTTGAAGC CACGACAGCG
GGCTATGAGA CGTTGATCGA AGAGGGGTTT GGGGGGGAAG ACATCTCCGC CCTCTACCGA
ACCAAATTAA AATAG
 
Protein sequence
MKIGVIGLGA MGWGMAMNLH RANLLEAVWN RTISRAHAFE AQSGVVVASD PATLAARCEV 
ILTCVSEDKD LFEVVDKLLA GLAPGKVVMD CSTVDPQTAV CCAERLANKQ VAFLDAPVTG
GVEGAQKGTL SMMIGGDARV LERIMPLLKP ITAHVTHMGP VGSGQKAKAV NQVMVAGINQ
AVTQALALGQ SLDLPLTKLI GAIAGGAAGN WFLDHRGLSM VENQFTAGFK VAHHLKDLRI
CRALTTEAGL EDTFLEATTA GYETLIEEGF GGEDISALYR TKLK