Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1681 |
Symbol | |
ID | 4481701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 2083312 |
End bp | 2084166 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639722424 |
Product | 6-phosphogluconate dehydrogenase, NAD-binding |
Protein accession | YP_865596 |
Protein GI | 117924979 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000300681 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.498538 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATAG GCGTCATTGG GTTGGGTGCG ATGGGGTGGG GCATGGCCAT GAATCTGCAC CGGGCCAACC TGTTGGAAGC TGTCTGGAAC CGTACCATCA GCCGTGCCCA TGCCTTTGAA GCCCAATCTG GTGTGGTGGT GGCAAGTGAC CCCGCAACTT TGGCGGCCCG TTGTGAGGTG ATCCTGACAT GCGTTTCGGA GGATAAAGAT CTGTTTGAGG TGGTGGATAA GCTGTTGGCC GGTCTCGCCC CCGGTAAAGT GGTGATGGAT TGTTCCACCG TTGACCCGCA AACGGCGGTC TGCTGTGCAG AGCGCCTAGC GAACAAGCAG GTGGCGTTTT TGGATGCTCC CGTCACCGGT GGGGTGGAAG GGGCGCAAAA GGGTACCCTT TCCATGATGA TCGGTGGGGA TGCTCGCGTG CTGGAGCGCA TAATGCCCCT GCTCAAGCCC ATCACCGCCC ATGTCACCCA TATGGGGCCT GTGGGCAGTG GGCAAAAGGC CAAAGCGGTC AACCAAGTGA TGGTGGCAGG CATCAACCAA GCGGTGACAC AAGCCCTGGC GTTGGGGCAA TCGCTCGATT TACCCCTCAC CAAATTGATA GGTGCGATCG CTGGTGGGGC TGCGGGCAAC TGGTTCTTGG ACCATAGAGG ATTATCTATG GTGGAGAACC AATTTACCGC AGGTTTTAAA GTAGCCCACC ATTTAAAAGA TCTTAGAATT TGCCGCGCCC TCACAACCGA GGCAGGCCTT GAGGATACTT TTCTTGAAGC CACGACAGCG GGCTATGAGA CGTTGATCGA AGAGGGGTTT GGGGGGGAAG ACATCTCCGC CCTCTACCGA ACCAAATTAA AATAG
|
Protein sequence | MKIGVIGLGA MGWGMAMNLH RANLLEAVWN RTISRAHAFE AQSGVVVASD PATLAARCEV ILTCVSEDKD LFEVVDKLLA GLAPGKVVMD CSTVDPQTAV CCAERLANKQ VAFLDAPVTG GVEGAQKGTL SMMIGGDARV LERIMPLLKP ITAHVTHMGP VGSGQKAKAV NQVMVAGINQ AVTQALALGQ SLDLPLTKLI GAIAGGAAGN WFLDHRGLSM VENQFTAGFK VAHHLKDLRI CRALTTEAGL EDTFLEATTA GYETLIEEGF GGEDISALYR TKLK
|
| |