| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1857 |
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| Symbol | |
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| ID | 3775220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1925835 |
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| End bp | 1926701 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637800298 |
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| Product | 3-hydroxyacid dehydrogenase |
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| Protein accession | YP_400874 |
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| Protein GI | 81300666 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.341144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTGCG GATTAATCGG AACTGGCTTA CTGGGGACCG CGATCGCGGA ACGCTTGCTG
ACGGTTGGAC AGCTGCTCAC GGTTTGGAAC CGAACGGCTG AACGGAGTCA GCCTTTAGTC
GCTTTGGGGG CCACGATCGC CCCGACACCA GCCGCATTGC TAGCCGACTG CGAGGTTTGC
CTACTCTTAC TCAGTGATGC TGAGGCGATC GCTGCAACCC TATTGACGGA GGAATCGCGA
TCGCAACTTG TCGGCAAGAC CATCATCCAG ATGGGCACGA TTTCGCCGGC TGAAAGTCGA
GCGATCGCTG ACCAAATCGC GGCGGCTGGT GGGCAATATT TGGAGGCACC GGTGCTGGGG
AGCCTGCCAG AAGCACGCAA CGGCACGCTG ATCGTCATGG TGGGGGCTGA ACCGGCTGTC
TTTGAACAAT GGCGATCGCT TTTGTGCCAT CTCAGTCCTG AACCTGAATG GATTGGGCCT
ATTGGAACAG CGGCGACTCT GAAATTAGCG CTCAACCAAT TGATTGGCTC ATTGACCAGT
GCCTTTGGCG GCAGTTTGGC GCTGCTGCAA CGGAGTGGTC TAGCTGTAGA ACCCTTCATG
GCAATTCTGC GTCAGAGTGC GCTGTATGCC CCAACCTTTG ATAAGAAGCT GTCGCGACTA
CTTAGCCATC AGTACGATAA CCCCAACTTC CCAACGACTC ACTTGGCGAA AGATCTCCGA
TTGTTCCGGG AAACTGCAGC GGATCTTGGG ATCACAACGG ATGCAGTCGA AGGAGTTGAG
TCCATTGTCC AAAAAGCGAT CGCCCAAGGT TGGGGCGATC AAGATTATTC AGCCCTCTAC
GAGGCGATTA ATCCTGATTC AAACTAA
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| Protein sequence | MRCGLIGTGL LGTAIAERLL TVGQLLTVWN RTAERSQPLV ALGATIAPTP AALLADCEVC
LLLLSDAEAI AATLLTEESR SQLVGKTIIQ MGTISPAESR AIADQIAAAG GQYLEAPVLG
SLPEARNGTL IVMVGAEPAV FEQWRSLLCH LSPEPEWIGP IGTAATLKLA LNQLIGSLTS
AFGGSLALLQ RSGLAVEPFM AILRQSALYA PTFDKKLSRL LSHQYDNPNF PTTHLAKDLR
LFRETAADLG ITTDAVEGVE SIVQKAIAQG WGDQDYSALY EAINPDSN
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