More than 300 homologs were found in PanDaTox collection
for query gene PC1_3412 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012912  Dd1591_0792  methyl-accepting chemotaxis sensory transducer  65.53 
 
 
542 aa  663    Dickeya zeae Ech1591  Bacteria  normal  0.821346  n/a   
 
 
-
 
NC_012880  Dd703_0826  methyl-accepting chemotaxis sensory transducer  63.33 
 
 
529 aa  636    Dickeya dadantii Ech703  Bacteria  normal  0.227259  n/a   
 
 
-
 
NC_013421  Pecwa_3571  methyl-accepting chemotaxis sensory transducer  93.75 
 
 
528 aa  966    Pectobacterium wasabiae WPP163  Bacteria  normal  0.595797  n/a   
 
 
-
 
NC_012917  PC1_3412  methyl-accepting chemotaxis sensory transducer  100 
 
 
528 aa  1054    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0936318  n/a   
 
 
-
 
NC_009832  Spro_0463  methyl-accepting chemotaxis sensory transducer  58.61 
 
 
517 aa  564  1.0000000000000001e-159  Serratia proteamaculans 568  Bacteria  hitchhiker  0.000944533  normal  0.933191 
 
 
-
 
NC_012912  Dd1591_0765  methyl-accepting chemotaxis sensory transducer  50.67 
 
 
528 aa  488  1e-137  Dickeya zeae Ech1591  Bacteria  normal  0.711695  n/a   
 
 
-
 
NC_012880  Dd703_0786  methyl-accepting chemotaxis sensory transducer  49.52 
 
 
529 aa  451  1e-125  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0416  methyl-accepting chemotaxis sensory transducer  48.85 
 
 
522 aa  442  9.999999999999999e-123  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_3447  methyl-accepting chemotaxis sensory transducer  48.94 
 
 
523 aa  428  1e-118  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3604  methyl-accepting chemotaxis sensory transducer  47.98 
 
 
523 aa  417  9.999999999999999e-116  Pectobacterium wasabiae WPP163  Bacteria  normal  0.0287623  n/a   
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  41.98 
 
 
562 aa  347  2e-94  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_010681  Bphyt_0620  methyl-accepting chemotaxis sensory transducer  42.97 
 
 
549 aa  347  2e-94  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0437284 
 
 
-
 
NC_007951  Bxe_A4080  methyl-accepting chemotaxis sensory transducer  43.6 
 
 
549 aa  343  2.9999999999999997e-93  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0345  methyl-accepting chemotaxis sensory transducer  42.39 
 
 
547 aa  342  9e-93  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5597  methyl-accepting chemotaxis sensory transducer  44.85 
 
 
570 aa  340  4e-92  Ralstonia eutropha JMP134  Bacteria  normal  0.253624  n/a   
 
 
-
 
NC_010498  EcSMS35_1298  methyl-accepting chemotaxis protein II  42.71 
 
 
553 aa  339  7e-92  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  0.00038087 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  39.01 
 
 
566 aa  337  2.9999999999999997e-91  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_009076  BURPS1106A_3934  methyl-accepting chemotaxis protein  42.94 
 
 
673 aa  332  1e-89  Burkholderia pseudomallei 1106a  Bacteria  normal  0.3175  n/a   
 
 
-
 
NC_006348  BMA2857  methyl-accepting chemotaxis protein, putative  42.75 
 
 
673 aa  331  2e-89  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0074  methyl-accepting chemotaxis protein I  42.75 
 
 
673 aa  331  2e-89  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3433  putative methyl-accepting chemotaxis protein  42.75 
 
 
673 aa  331  2e-89  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3853  methyl-accepting chemotaxis protein II  42.75 
 
 
671 aa  331  2e-89  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  41.34 
 
 
555 aa  330  3e-89  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_009080  BMA10247_3118  putative methyl-accepting chemotaxis protein  42.75 
 
 
673 aa  330  3e-89  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0285227  n/a   
 
 
-
 
NC_008836  BMA10229_A1686  putative methyl-accepting chemotaxis protein  42.75 
 
 
673 aa  330  3e-89  Burkholderia mallei NCTC 10229  Bacteria  normal  0.303273  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  40.45 
 
 
567 aa  330  5.0000000000000004e-89  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I3180  methyl-accepting chemotaxis protein, putative  43.89 
 
 
666 aa  330  6e-89  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  43.38 
 
 
617 aa  328  2.0000000000000001e-88  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  42.99 
 
 
618 aa  327  3e-88  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
CP001509  ECD_04232  methyl-accepting chemotaxis protein I, serine sensor receptor  41.76 
 
 
551 aa  327  4.0000000000000003e-88  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_04198  hypothetical protein  41.76 
 
 
551 aa  327  4.0000000000000003e-88  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A2023  methyl-accepting chemotaxis sensory transducer  41.3 
 
 
538 aa  326  5e-88  Burkholderia xenovorans LB400  Bacteria  normal  0.205381  normal 
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  57.7 
 
 
557 aa  326  6e-88  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
CP001637  EcDH1_3642  methyl-accepting chemotaxis sensory transducer  42.26 
 
 
551 aa  326  7e-88  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3360  methyl-accepting chemotaxis sensory transducer  43.33 
 
 
655 aa  325  1e-87  Burkholderia sp. 383  Bacteria  normal  0.139099  normal 
 
 
-
 
NC_010681  Bphyt_0409  methyl-accepting chemotaxis sensory transducer  40.61 
 
 
585 aa  325  1e-87  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0496  methyl-accepting chemotaxis sensory transducer  36.98 
 
 
530 aa  325  1e-87  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0513  methyl-accepting chemotaxis sensory transducer  42.64 
 
 
586 aa  324  2e-87  Enterobacter sp. 638  Bacteria  normal  hitchhiker  0.00498581 
 
 
-
 
NC_012912  Dd1591_1804  methyl-accepting chemotaxis sensory transducer  42.89 
 
 
562 aa  324  2e-87  Dickeya zeae Ech1591  Bacteria  normal  0.0522685  n/a   
 
 
-
 
NC_007951  Bxe_A4301  methyl-accepting chemotaxis sensory transducer  41.54 
 
 
587 aa  324  3e-87  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  57.95 
 
 
557 aa  323  4e-87  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  57.95 
 
 
557 aa  323  4e-87  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2245  methyl-accepting chemotaxis sensory transducer  41.05 
 
 
524 aa  323  4e-87  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010658  SbBS512_E4893  methyl-accepting chemotaxis protein I  41.57 
 
 
551 aa  323  5e-87  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2509  methyl-accepting chemotaxis sensory transducer  39.16 
 
 
557 aa  323  7e-87  Dickeya dadantii Ech703  Bacteria  normal  0.377261  n/a   
 
 
-
 
NC_011353  ECH74115_2624  methyl-accepting chemotaxis protein II  42.12 
 
 
553 aa  323  7e-87  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.784316  hitchhiker  0.00000000183949 
 
 
-
 
NC_010498  EcSMS35_4900  methyl-accepting chemotaxis protein I  41.7 
 
 
554 aa  322  9.000000000000001e-87  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.979291 
 
 
-
 
NC_012912  Dd1591_0394  methyl-accepting chemotaxis sensory transducer  37.93 
 
 
530 aa  322  9.999999999999999e-87  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5868  methyl-accepting chemotaxis protein I  41.7 
 
 
554 aa  322  9.999999999999999e-87  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A4586  methyl-accepting chemotaxis protein I  41.7 
 
 
557 aa  322  9.999999999999999e-87  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3700  methyl-accepting chemotaxis sensory transducer  42.21 
 
 
554 aa  321  1.9999999999999998e-86  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.125609 
 
 
-
 
NC_009801  EcE24377A_4947  methyl-accepting chemotaxis protein I  42.21 
 
 
554 aa  321  1.9999999999999998e-86  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_3407  methyl-accepting chemotaxis sensory transducer  40.89 
 
 
545 aa  320  3e-86  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B1203  methyl-accepting chemotaxis protein II  42.06 
 
 
553 aa  320  3e-86  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.697919  n/a   
 
 
-
 
NC_012912  Dd1591_3580  methyl-accepting chemotaxis sensory transducer  40.19 
 
 
572 aa  320  3e-86  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_01857  methyl-accepting chemotaxis protein II  41.92 
 
 
553 aa  320  3.9999999999999996e-86  Escherichia coli BL21(DE3)  Bacteria  normal  0.13191  n/a   
 
 
-
 
CP001637  EcDH1_1754  methyl-accepting chemotaxis sensory transducer  41.92 
 
 
553 aa  320  3.9999999999999996e-86  Escherichia coli DH1  Bacteria  normal  0.0705276  n/a   
 
 
-
 
NC_010468  EcolC_1746  methyl-accepting chemotaxis sensory transducer  41.92 
 
 
553 aa  320  3.9999999999999996e-86  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_01846  hypothetical protein  41.92 
 
 
553 aa  320  3.9999999999999996e-86  Escherichia coli BL21  Bacteria  normal  0.186429  n/a   
 
 
-
 
NC_011205  SeD_A1326  methyl-accepting chemotaxis protein II  42.06 
 
 
553 aa  320  3.9999999999999996e-86  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.452066  hitchhiker  2.3261e-17 
 
 
-
 
NC_009800  EcHS_A1982  methyl-accepting chemotaxis protein II  41.92 
 
 
553 aa  320  3.9999999999999996e-86  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A3501  methyl-accepting chemotaxis sensory transducer  40.87 
 
 
547 aa  320  6e-86  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.601659  normal 
 
 
-
 
NC_011149  SeAg_B3326  methyl-accepting chemotaxis sensory transducer  40.87 
 
 
547 aa  319  7.999999999999999e-86  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5306  methyl-accepting chemotaxis sensory transducer  38.81 
 
 
565 aa  319  7.999999999999999e-86  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00488588  normal  0.0415564 
 
 
-
 
NC_009801  EcE24377A_2119  methyl-accepting chemotaxis protein II  41.92 
 
 
553 aa  319  7.999999999999999e-86  Escherichia coli E24377A  Bacteria  normal  0.0158521  n/a   
 
 
-
 
NC_011080  SNSL254_A3406  methyl-accepting chemotaxis sensory transducer  40.87 
 
 
547 aa  319  7.999999999999999e-86  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3400  methyl-accepting chemotaxis sensory transducer  40.87 
 
 
547 aa  318  1e-85  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.779493 
 
 
-
 
NC_011149  SeAg_B3779  methyl-accepting chemotaxis protein  41.6 
 
 
547 aa  318  1e-85  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A2079  methyl-accepting chemotaxis protein II  42.06 
 
 
553 aa  318  1e-85  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.429347  hitchhiker  1.96177e-16 
 
 
-
 
NC_010551  BamMC406_0184  methyl-accepting chemotaxis sensory transducer  42.65 
 
 
648 aa  318  1e-85  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_0171  methyl-accepting chemotaxis sensory transducer  42.45 
 
 
648 aa  318  1e-85  Burkholderia ambifaria AMMD  Bacteria  normal  0.451768  n/a   
 
 
-
 
NC_011094  SeSA_A3769  methyl-accepting chemotaxis protein I  41.6 
 
 
547 aa  318  1e-85  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2406  methyl-accepting chemotaxis sensory transducer  38.68 
 
 
559 aa  318  2e-85  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2074  methyl-accepting chemotaxis protein II  41.5 
 
 
553 aa  318  2e-85  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.162752  hitchhiker  0.000345874 
 
 
-
 
NC_011083  SeHA_C2134  methyl-accepting chemotaxis protein II  41.87 
 
 
553 aa  318  2e-85  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  1.16019e-17 
 
 
-
 
NC_011083  SeHA_C3889  methyl-accepting chemotaxis protein I  41.6 
 
 
547 aa  317  3e-85  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_2982  methyl-accepting chemotaxis sensory transducer  42.01 
 
 
541 aa  317  4e-85  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A3335  methyl-accepting chemotaxis sensory transducer  40.68 
 
 
547 aa  317  4e-85  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.499063 
 
 
-
 
NC_012912  Dd1591_0395  methyl-accepting chemotaxis sensory transducer  39.58 
 
 
556 aa  317  4e-85  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A3846  methyl-accepting chemotaxis protein I  41.6 
 
 
547 aa  316  6e-85  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4305  methyl-accepting chemotaxis sensory transducer  40.3 
 
 
536 aa  316  6e-85  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2952  methyl-accepting chemotaxis sensory transducer  40.38 
 
 
540 aa  315  9e-85  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A4887  methyl-accepting chemotaxis protein I  52.48 
 
 
553 aa  315  9.999999999999999e-85  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  52.48 
 
 
553 aa  315  9.999999999999999e-85  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_012917  PC1_1208  methyl-accepting chemotaxis sensory transducer  39.96 
 
 
555 aa  315  9.999999999999999e-85  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000392698  n/a   
 
 
-
 
NC_013421  Pecwa_1857  methyl-accepting chemotaxis sensory transducer  54.77 
 
 
561 aa  315  9.999999999999999e-85  Pectobacterium wasabiae WPP163  Bacteria  normal  0.769355  n/a   
 
 
-
 
NC_010622  Bphy_2972  methyl-accepting chemotaxis sensory transducer  40.66 
 
 
597 aa  314  1.9999999999999998e-84  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.00113075 
 
 
-
 
NC_011205  SeD_A3949  methyl-accepting chemotaxis protein I  41.42 
 
 
547 aa  315  1.9999999999999998e-84  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.748503  normal 
 
 
-
 
NC_007974  Rmet_3678  methyl-accepting chemotaxis sensory transducer  45.52 
 
 
605 aa  313  3.9999999999999997e-84  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.12372 
 
 
-
 
NC_011094  SeSA_A4786  methyl-accepting chemotaxis protein I  41.63 
 
 
553 aa  313  4.999999999999999e-84  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.709187  normal 
 
 
-
 
NC_011205  SeD_A4946  methyl-accepting chemotaxis protein I  55.66 
 
 
553 aa  312  9e-84  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.556415 
 
 
-
 
CP001509  ECD_01378  methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor  38.48 
 
 
546 aa  311  1e-83  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2225  methyl-accepting chemotaxis sensory transducer  38.48 
 
 
546 aa  311  1e-83  Escherichia coli DH1  Bacteria  normal  0.213228  n/a   
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  47.37 
 
 
600 aa  311  1e-83  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2849  methyl-accepting chemotaxis sensory transducer  42.68 
 
 
659 aa  312  1e-83  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_01390  hypothetical protein  38.48 
 
 
546 aa  311  1e-83  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0258  methyl-accepting chemotaxis sensory transducer  42.68 
 
 
659 aa  312  1e-83  Burkholderia cenocepacia HI2424  Bacteria  decreased coverage  0.00414638  n/a   
 
 
-
 
NC_009801  EcE24377A_1600  methyl-accepting chemotaxis protein III  38.48 
 
 
546 aa  311  1e-83  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0240  methyl-accepting chemotaxis sensory transducer  42.48 
 
 
657 aa  312  1e-83  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0244017  normal 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  41.18 
 
 
572 aa  311  2e-83  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
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