More than 300 homologs were found in PanDaTox collection
for query gene Namu_2394 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013235  Namu_2394  response regulator receiver and ANTAR domain protein  100 
 
 
218 aa  418  1e-116  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00108275  hitchhiker  0.000509226 
 
 
-
 
NC_013235  Namu_0678  response regulator receiver and ANTAR domain protein  53 
 
 
243 aa  204  7e-52  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3061  response regulator receiver and ANTAR domain protein  50.27 
 
 
194 aa  172  5e-42  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00113676  hitchhiker  0.000689676 
 
 
-
 
NC_013159  Svir_25990  response regulator with putative antiterminator output domain protein  46.81 
 
 
204 aa  167  1e-40  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3775  response regulator receiver and ANTAR domain-containing protein  48.65 
 
 
207 aa  162  3e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.665226  normal  0.0118196 
 
 
-
 
NC_014151  Cfla_1977  response regulator receiver and ANTAR domain protein  47.4 
 
 
227 aa  154  1e-36  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.239234  normal 
 
 
-
 
NC_013093  Amir_5540  response regulator receiver and ANTAR domain protein  42.25 
 
 
200 aa  154  1e-36  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1181  response regulator receiver  45.45 
 
 
207 aa  153  2e-36  Thermobifida fusca YX  Bacteria  normal  0.928438  n/a   
 
 
-
 
NC_013521  Sked_20250  response regulator with putative antiterminator output domain  45.55 
 
 
226 aa  152  4e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0947543 
 
 
-
 
NC_009077  Mjls_3036  response regulator receiver/ANTAR domain-containing protein  42.58 
 
 
210 aa  152  4e-36  Mycobacterium sp. JLS  Bacteria  normal  0.222389  normal  0.216241 
 
 
-
 
NC_014210  Ndas_3159  response regulator receiver and ANTAR domain protein  44.62 
 
 
212 aa  152  5e-36  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1506  response regulator receiver and ANTAR domain protein  45.41 
 
 
220 aa  152  5e-36  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1223  response regulator receiver and ANTAR domain protein  45.74 
 
 
229 aa  150  1e-35  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.788892 
 
 
-
 
NC_008146  Mmcs_3021  response regulator receiver/ANTAR domain-containing protein  42.11 
 
 
210 aa  150  1e-35  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3067  response regulator receiver/ANTAR domain-containing protein  42.11 
 
 
210 aa  150  1e-35  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2840  response regulator receiver/ANTAR domain-containing protein  45.7 
 
 
213 aa  150  1e-35  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0401204  normal 
 
 
-
 
NC_009338  Mflv_3575  response regulator receiver/ANTAR domain-containing protein  44.74 
 
 
229 aa  149  2e-35  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.10936  normal  0.0183031 
 
 
-
 
NC_009565  TBFG_11642  two component system transcriptional regulator  44.39 
 
 
205 aa  150  2e-35  Mycobacterium tuberculosis F11  Bacteria  normal  0.0378541  normal  0.634495 
 
 
-
 
NC_013441  Gbro_2893  response regulator receiver  45.41 
 
 
206 aa  149  3e-35  Gordonia bronchialis DSM 43247  Bacteria  normal  0.723289  n/a   
 
 
-
 
NC_012669  Bcav_2208  response regulator receiver and ANTAR domain protein  44.92 
 
 
220 aa  149  3e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2958  response regulator receiver and ANTAR domain protein  42.08 
 
 
229 aa  146  2.0000000000000003e-34  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.799557  normal  0.502809 
 
 
-
 
NC_009380  Strop_3151  response regulator receiver  43.85 
 
 
206 aa  145  4.0000000000000006e-34  Salinispora tropica CNB-440  Bacteria  normal  normal  0.332536 
 
 
-
 
NC_014165  Tbis_1468  response regulator receiver and ANTAR domain-containing protein  43.24 
 
 
197 aa  145  4.0000000000000006e-34  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2860  response regulator receiver and ANTAR domain protein  43.48 
 
 
214 aa  145  4.0000000000000006e-34  Thermomonospora curvata DSM 43183  Bacteria  normal  0.153721  n/a   
 
 
-
 
NC_009953  Sare_3378  response regulator receiver/ANTAR domain-containing protein  43.85 
 
 
206 aa  145  5e-34  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0248143 
 
 
-
 
NC_009921  Franean1_2035  response regulator receiver/ANTAR domain-containing protein  42.86 
 
 
199 aa  142  5e-33  Frankia sp. EAN1pec  Bacteria  normal  normal  0.480822 
 
 
-
 
NC_013172  Bfae_14950  response regulator with putative antiterminator output domain  43.85 
 
 
215 aa  141  7e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  0.117628  n/a   
 
 
-
 
NC_008578  Acel_1081  response regulator receiver/ANTAR domain-containing protein  49.7 
 
 
247 aa  141  7e-33  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_2483  response regulator receiver and ANTAR domain protein  41.67 
 
 
205 aa  141  9e-33  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1618  response regulator receiver/ANTAR domain-containing protein  42.33 
 
 
199 aa  140  1.9999999999999998e-32  Frankia sp. CcI3  Bacteria  normal  0.144201  normal  0.292856 
 
 
-
 
NC_012803  Mlut_11030  response regulator with putative antiterminator output domain  43.55 
 
 
198 aa  140  1.9999999999999998e-32  Micrococcus luteus NCTC 2665  Bacteria  normal  0.241703  n/a   
 
 
-
 
NC_011886  Achl_1689  response regulator receiver and ANTAR domain protein  40.64 
 
 
201 aa  139  3e-32  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000385738 
 
 
-
 
NC_013131  Caci_5687  response regulator receiver and ANTAR domain protein  40.22 
 
 
210 aa  138  4.999999999999999e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_1694  response regulator receiver/ANTAR domain-containing protein  40.64 
 
 
201 aa  139  4.999999999999999e-32  Arthrobacter sp. FB24  Bacteria  normal  0.136848  n/a   
 
 
-
 
NC_013595  Sros_2955  response regulator  42.62 
 
 
199 aa  138  6e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_3208  response regulator receiver and ANTAR domain protein  43.96 
 
 
200 aa  138  6e-32  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3018  response regulator receiver  44.26 
 
 
207 aa  135  3.0000000000000003e-31  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0616  response regulator receiver domain protein  34.88 
 
 
249 aa  128  7.000000000000001e-29  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_010816  BLD_0739  putative response regulator  37.32 
 
 
261 aa  127  1.0000000000000001e-28  Bifidobacterium longum DJO10A  Bacteria  hitchhiker  0.000540248  n/a   
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  36.81 
 
 
197 aa  125  7e-28  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_009523  RoseRS_4102  response regulator receiver/ANTAR domain-containing protein  35.16 
 
 
194 aa  116  3e-25  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4203  response regulator receiver/ANTAR domain-containing protein  37.99 
 
 
195 aa  115  6.9999999999999995e-25  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.793788  n/a   
 
 
-
 
NC_009767  Rcas_3658  response regulator receiver/ANTAR domain-containing protein  35.16 
 
 
194 aa  112  5e-24  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.568485 
 
 
-
 
NC_011831  Cagg_2047  response regulator receiver and ANTAR domain protein  35.71 
 
 
191 aa  111  7.000000000000001e-24  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000000169009  normal 
 
 
-
 
NC_013169  Ksed_12950  response regulator with putative antiterminator output domain  38.71 
 
 
189 aa  108  6e-23  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.22629  normal  0.269406 
 
 
-
 
NC_013216  Dtox_3761  response regulator receiver and ANTAR domain protein  32.61 
 
 
194 aa  108  6e-23  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000015775  normal 
 
 
-
 
NC_002939  GSU2822  response regulator  33.7 
 
 
191 aa  105  4e-22  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2028  response regulator receiver/ANTAR domain-containing protein  34.62 
 
 
192 aa  105  5e-22  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000049817  n/a   
 
 
-
 
NC_013216  Dtox_3764  response regulator receiver and ANTAR domain protein  30.81 
 
 
194 aa  101  1e-20  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0425638  normal 
 
 
-
 
NC_007517  Gmet_0660  response regulator receiver/ANTAR domain-containing protein  32.07 
 
 
202 aa  100  2e-20  Geobacter metallireducens GS-15  Bacteria  normal  0.132289  normal  0.0166929 
 
 
-
 
NC_007644  Moth_1295  response regulator receiver/ANTAR domain-containing protein  33.51 
 
 
208 aa  98.6  7e-20  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.153579  normal  0.0128304 
 
 
-
 
NC_009253  Dred_2808  response regulator receiver/ANTAR domain-containing protein  30.77 
 
 
220 aa  97.1  2e-19  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.00041222  n/a   
 
 
-
 
NC_013124  Afer_1081  response regulator receiver and ANTAR domain protein  35.98 
 
 
203 aa  97.4  2e-19  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1289  response regulator receiver/ANTAR domain-containing protein  33.01 
 
 
221 aa  96.3  3e-19  Desulfotomaculum reducens MI-1  Bacteria  normal  0.132207  n/a   
 
 
-
 
NC_009483  Gura_1146  response regulator receiver/ANTAR domain-containing protein  31.52 
 
 
188 aa  96.7  3e-19  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000356105  n/a   
 
 
-
 
NC_002977  MCA0588  response regulator NasT  35.15 
 
 
191 aa  95.9  4e-19  Methylococcus capsulatus str. Bath  Bacteria  normal  0.419145  n/a   
 
 
-
 
NC_009972  Haur_4357  response regulator receiver/ANTAR domain-containing protein  33.16 
 
 
198 aa  94.7  8e-19  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.480943  n/a   
 
 
-
 
NC_013517  Sterm_1051  response regulator receiver and ANTAR domain protein  31.61 
 
 
192 aa  94.4  1e-18  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3118  response regulator receiver/ANTAR domain-containing protein  34.07 
 
 
196 aa  93.6  2e-18  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0297  response regulator receiver/ANTAR domain-containing protein  28.02 
 
 
195 aa  93.2  3e-18  Petrotoga mobilis SJ95  Bacteria  normal  0.719259  n/a   
 
 
-
 
NC_008261  CPF_0888  response regulator  27.81 
 
 
191 aa  92.8  4e-18  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2031  response regulator receiver/ANTAR domain-containing protein  32.47 
 
 
198 aa  92  5e-18  Candidatus Desulforudis audaxviator MP104C  Bacteria  unclonable  0.00000000027462  n/a   
 
 
-
 
NC_009523  RoseRS_2361  response regulator receiver/ANTAR domain-containing protein  33.15 
 
 
196 aa  92  6e-18  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_0084  response regulator receiver and ANTAR domain protein  31.18 
 
 
242 aa  92  6e-18  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.682854  n/a   
 
 
-
 
NC_010718  Nther_0963  response regulator receiver and ANTAR domain protein  29.45 
 
 
191 aa  89.4  4e-17  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.0000231614  normal 
 
 
-
 
NC_010552  BamMC406_4403  response regulator receiver/ANTAR domain-containing protein  39.35 
 
 
198 aa  88.2  8e-17  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.155669 
 
 
-
 
NC_008391  Bamb_3940  response regulator receiver/ANTAR domain-containing protein  39.35 
 
 
198 aa  88.2  8e-17  Burkholderia ambifaria AMMD  Bacteria  normal  0.590133  normal 
 
 
-
 
NC_011831  Cagg_2517  response regulator receiver and ANTAR domain protein  34.66 
 
 
194 aa  87.4  1e-16  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_3459  response regulator receiver/ANTAR domain-containing protein  28.72 
 
 
205 aa  87.4  1e-16  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  35.16 
 
 
194 aa  86.3  3e-16  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_010086  Bmul_4144  response regulator receiver/ANTAR domain-containing protein  40 
 
 
201 aa  86.7  3e-16  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.071014 
 
 
-
 
NC_007511  Bcep18194_B1340  response regulator receiver/ANTAR domain-containing protein  39.35 
 
 
198 aa  85.5  6e-16  Burkholderia sp. 383  Bacteria  normal  normal  0.579049 
 
 
-
 
NC_010515  Bcenmc03_5794  response regulator receiver/ANTAR domain-containing protein  39.35 
 
 
198 aa  85.5  6e-16  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3858  response regulator receiver/ANTAR domain-containing protein  39.35 
 
 
219 aa  85.1  7e-16  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.853052  n/a   
 
 
-
 
NC_008543  Bcen2424_4510  response regulator receiver/ANTAR domain-containing protein  39.35 
 
 
219 aa  85.1  7e-16  Burkholderia cenocepacia HI2424  Bacteria  decreased coverage  0.000166869  normal 
 
 
-
 
NC_010320  Teth514_2177  response regulator receiver/ANTAR domain-containing protein  26.2 
 
 
190 aa  84  0.000000000000001  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1167  response regulator NasT  38.06 
 
 
198 aa  84  0.000000000000002  Burkholderia thailandensis E264  Bacteria  normal  0.136185  n/a   
 
 
-
 
NC_009654  Mmwyl1_2821  response regulator receiver/ANTAR domain-containing protein  27.27 
 
 
224 aa  82  0.000000000000006  Marinomonas sp. MWYL1  Bacteria  normal  0.41961  normal  0.477248 
 
 
-
 
NC_013739  Cwoe_5028  response regulator receiver and ANTAR domain protein  33.87 
 
 
198 aa  81.6  0.000000000000008  Conexibacter woesei DSM 14684  Bacteria  normal  0.181706  normal  0.0113639 
 
 
-
 
NC_009075  BURPS668_A1759  response regulator/ANTAR domain-containing protein  36.77 
 
 
198 aa  81.6  0.000000000000008  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA1090  response regulator NasT  36.77 
 
 
198 aa  81.3  0.000000000000009  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0864919  n/a   
 
 
-
 
NC_010623  Bphy_3445  response regulator receiver/ANTAR domain-containing protein  35.15 
 
 
191 aa  81.3  0.000000000000009  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007435  BURPS1710b_A0246  response regulator NasT  36.77 
 
 
198 aa  81.3  0.000000000000009  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1255  response regulator/ANTAR domain-containing protein  36.77 
 
 
198 aa  81.3  0.000000000000009  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0422038  n/a   
 
 
-
 
NC_008835  BMA10229_0333  response regulator NasT  36.77 
 
 
198 aa  81.3  0.000000000000009  Burkholderia mallei NCTC 10229  Bacteria  normal  0.169956  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1670  response regulator/ANTAR domain-containing protein  36.77 
 
 
198 aa  81.3  0.000000000000009  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0087  response regulator/ANTAR domain-containing protein  36.77 
 
 
198 aa  81.3  0.000000000000009  Burkholderia mallei SAVP1  Bacteria  normal  0.792302  n/a   
 
 
-
 
NC_011666  Msil_3768  response regulator receiver and ANTAR domain protein  32.32 
 
 
195 aa  80.1  0.00000000000002  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007952  Bxe_B1048  response regulator receiver/ANTAR domain-containing protein  34.87 
 
 
191 aa  79.3  0.00000000000005  Burkholderia xenovorans LB400  Bacteria  normal  0.192908  normal  0.77765 
 
 
-
 
NC_011369  Rleg2_1455  response regulator receiver and ANTAR domain protein  34.51 
 
 
195 aa  78.2  0.00000000000009  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.770993 
 
 
-
 
NC_008254  Meso_1448  response regulator receiver/ANTAR domain-containing protein  34.06 
 
 
196 aa  78.2  0.0000000000001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3317  putative response regulator NasT  29.52 
 
 
201 aa  77  0.0000000000002  Colwellia psychrerythraea 34H  Bacteria  normal  0.0234612  n/a   
 
 
-
 
NC_012850  Rleg_1632  response regulator receiver and ANTAR domain protein  33.8 
 
 
207 aa  77.4  0.0000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0623893 
 
 
-
 
NC_010676  Bphyt_5673  response regulator receiver and ANTAR domain protein  33.33 
 
 
191 aa  77.4  0.0000000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.598594 
 
 
-
 
NC_009620  Smed_4528  response regulator receiver/ANTAR domain-containing protein  33.78 
 
 
196 aa  77  0.0000000000002  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_2091  response regulator  30.46 
 
 
187 aa  76.6  0.0000000000003  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0569  response regulator receiver and ANTAR domain protein  29.94 
 
 
194 aa  76.3  0.0000000000003  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.000937079  n/a   
 
 
-
 
NC_008228  Patl_2529  response regulator receiver/ANTAR domain-containing protein  29.44 
 
 
212 aa  76.3  0.0000000000003  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_1968  response regulator receiver/ANTAR domain-containing protein  35.97 
 
 
193 aa  75.1  0.0000000000008  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_3741  response regulator receiver/ANTAR domain-containing protein  36.23 
 
 
202 aa  74.3  0.000000000001  Methylobacterium sp. 4-46  Bacteria  normal  0.755024  normal  0.109153 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>