More than 300 homologs were found in PanDaTox collection
for query gene Msed_1989 on replicon NC_009440
Organism: Metallosphaera sedula DSM 5348



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009440  Msed_1989  carbamoyl phosphate synthase small subunit  100 
 
 
372 aa  770    Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
CP001800  Ssol_1702  carbamoyl-phosphate synthase, small subunit  68.8 
 
 
367 aa  533  1e-150  Sulfolobus solfataricus 98/2  Archaea  normal  0.304512  n/a   
 
 
-
 
NC_009954  Cmaq_1295  carbamoyl phosphate synthase small subunit  45.87 
 
 
359 aa  335  5.999999999999999e-91  Caldivirga maquilingensis IC-167  Archaea  normal  normal  0.0622694 
 
 
-
 
NC_010525  Tneu_0134  carbamoyl phosphate synthase small subunit  45.73 
 
 
352 aa  318  1e-85  Thermoproteus neutrophilus V24Sta  Archaea  normal  normal  0.0700415 
 
 
-
 
NC_009376  Pars_0143  carbamoyl phosphate synthase small subunit  44.9 
 
 
360 aa  315  7e-85  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal 
 
 
-
 
NC_009073  Pcal_0113  carbamoyl phosphate synthase small subunit  44.76 
 
 
342 aa  308  1.0000000000000001e-82  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  0.220432 
 
 
-
 
NC_008701  Pisl_1183  carbamoyl phosphate synthase small subunit  47.35 
 
 
330 aa  304  2.0000000000000002e-81  Pyrobaculum islandicum DSM 4184  Archaea  normal  normal 
 
 
-
 
NC_010085  Nmar_1086  carbamoyl-phosphate synthase small subunit  41.58 
 
 
384 aa  299  5e-80  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  40.27 
 
 
359 aa  293  2e-78  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_009635  Maeo_0466  carbamoyl phosphate synthase small subunit  41.1 
 
 
357 aa  292  7e-78  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_1011  carbamoyl phosphate synthase small subunit  40.56 
 
 
364 aa  279  7e-74  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1303  carbamoyl-phosphate synthase, small subunit  41.13 
 
 
359 aa  277  2e-73  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0780078  n/a   
 
 
-
 
NC_010655  Amuc_1250  carbamoyl-phosphate synthase, small subunit  38.92 
 
 
372 aa  275  7e-73  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_002936  DET1201  carbamoyl phosphate synthase small subunit  39.78 
 
 
364 aa  273  3e-72  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2536  carbamoyl phosphate synthase small subunit  42.51 
 
 
373 aa  273  3e-72  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0261621  n/a   
 
 
-
 
NC_007644  Moth_0881  carbamoyl-phosphate synthase small subunit  38.81 
 
 
361 aa  273  3e-72  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  38.12 
 
 
379 aa  273  4.0000000000000004e-72  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_013552  DhcVS_984  carbamoyl-phosphate synthase, small subunit  39.5 
 
 
364 aa  273  4.0000000000000004e-72  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0661  carbamoyl phosphate synthase small subunit  41.76 
 
 
356 aa  272  7e-72  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_02880  carbamoyl-phosphate synthase, small subunit  39 
 
 
364 aa  271  1e-71  Halothermothrix orenii H 168  Bacteria  normal  0.422195  n/a   
 
 
-
 
NC_011725  BCB4264_A3985  carbamoyl phosphate synthase small subunit  41.14 
 
 
365 aa  271  2e-71  Bacillus cereus B4264  Bacteria  normal  0.289727  n/a   
 
 
-
 
NC_005945  BAS3738  carbamoyl phosphate synthase small subunit  41.14 
 
 
365 aa  270  2.9999999999999997e-71  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3629  carbamoyl phosphate synthase small subunit  41.14 
 
 
365 aa  270  2.9999999999999997e-71  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4026  carbamoyl phosphate synthase small subunit  41.14 
 
 
365 aa  270  2.9999999999999997e-71  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0667428  n/a   
 
 
-
 
NC_011773  BCAH820_3901  carbamoyl phosphate synthase small subunit  41.14 
 
 
365 aa  270  2.9999999999999997e-71  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000355158 
 
 
-
 
NC_006274  BCZK3646  carbamoyl phosphate synthase small subunit  41.14 
 
 
365 aa  269  5e-71  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_3932  carbamoyl phosphate synthase small subunit  40.87 
 
 
365 aa  269  5.9999999999999995e-71  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A3936  carbamoyl phosphate synthase small subunit  40.87 
 
 
365 aa  269  5.9999999999999995e-71  Bacillus cereus AH187  Bacteria  normal  0.0146429  n/a   
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  37.7 
 
 
359 aa  268  2e-70  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  39.23 
 
 
356 aa  267  2.9999999999999995e-70  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_1699  carbamoyl phosphate synthase small subunit  41.6 
 
 
347 aa  266  5e-70  Petrotoga mobilis SJ95  Bacteria  normal  0.213064  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3714  carbamoyl phosphate synthase small subunit  40.82 
 
 
365 aa  266  5e-70  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.971369  n/a   
 
 
-
 
BN001307  ANIA_02243  carbamoyl-phosphate synthase, small subunit (Eurofung)  39.28 
 
 
454 aa  266  5.999999999999999e-70  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.163924  normal 
 
 
-
 
NC_011772  BCG9842_B1256  carbamoyl phosphate synthase small subunit  40.6 
 
 
365 aa  266  5.999999999999999e-70  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1783  carbamoyl-phosphate synthase, small subunit  36.91 
 
 
358 aa  265  8e-70  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3203  carbamoyl-phosphate synthase, small subunit  38.54 
 
 
368 aa  262  6.999999999999999e-69  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0950  carbamoyl-phosphate synthase small subunit  37.06 
 
 
357 aa  260  2e-68  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG0529  carbamoyl phosphate synthase small subunit  38.94 
 
 
357 aa  260  3e-68  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_009635  Maeo_0566  carbamoyl phosphate synthase small subunit  41.3 
 
 
353 aa  258  9e-68  Methanococcus aeolicus Nankai-3  Archaea  normal  0.464612  n/a   
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  36.43 
 
 
380 aa  258  1e-67  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1371  carbamoyl-phosphate synthase, small subunit  38.15 
 
 
368 aa  258  1e-67  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
BN001308  ANIA_00565  Protein pyrABCN [Includes Glutamine-dependent carbamoyl-phosphate(EC 6.3.5.5);Aspartate carbamoyltransferase(EC 2.1.3.2)] [Source:UniProtKB/Swiss-Prot;Acc:O93937]  39.02 
 
 
2275 aa  257  2e-67  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
NC_002976  SERP0768  carbamoyl phosphate synthase small subunit  38.5 
 
 
366 aa  257  3e-67  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009135  MmarC5_1820  carbamoyl phosphate synthase small subunit  38.34 
 
 
366 aa  256  5e-67  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1046  carbamoyl phosphate synthase small subunit  39.34 
 
 
364 aa  256  6e-67  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0836  carbamoyl phosphate synthase small subunit  39.1 
 
 
366 aa  255  8e-67  Methanococcus maripaludis C7  Archaea  normal  0.498309  normal 
 
 
-
 
NC_008025  Dgeo_2060  carbamoyl phosphate synthase small subunit  38.7 
 
 
394 aa  254  1.0000000000000001e-66  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.745912 
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  37.67 
 
 
358 aa  254  2.0000000000000002e-66  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal 
 
 
-
 
NC_013411  GYMC61_1916  carbamoyl phosphate synthase small subunit  38.44 
 
 
364 aa  254  2.0000000000000002e-66  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007355  Mbar_A2375  carbamoyl phosphate synthase small subunit  37.53 
 
 
369 aa  253  3e-66  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.643002  normal  0.386129 
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  35.48 
 
 
391 aa  253  3e-66  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_010483  TRQ2_0379  carbamoyl phosphate synthase small subunit  35.1 
 
 
392 aa  252  6e-66  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0362  carbamoyl phosphate synthase small subunit  35.1 
 
 
392 aa  252  6e-66  Thermotoga petrophila RKU-1  Bacteria  normal  0.0108123  n/a   
 
 
-
 
NC_013517  Sterm_2670  carbamoyl-phosphate synthase, small subunit  36.8 
 
 
351 aa  251  1e-65  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009975  MmarC6_1081  carbamoyl phosphate synthase small subunit  38.46 
 
 
366 aa  251  1e-65  Methanococcus maripaludis C6  Archaea  normal  0.621678  n/a   
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  35.9 
 
 
389 aa  251  1e-65  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_009513  Lreu_0086  carbamoyl phosphate synthase small subunit  38.25 
 
 
362 aa  251  2e-65  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.000481793  n/a   
 
 
-
 
NC_008532  STER_0558  carbamoyl phosphate synthase small subunit  37.57 
 
 
362 aa  250  2e-65  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1307  carbamoyl-phosphate synthase, small subunit  37.36 
 
 
368 aa  251  2e-65  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG1043  carbamoyl phosphate synthase small subunit  38.02 
 
 
358 aa  249  6e-65  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_0871  carbamoyl phosphate synthase small subunit  38.57 
 
 
365 aa  248  2e-64  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_008262  CPR_2577  carbamoyl phosphate synthase small subunit  36.39 
 
 
349 aa  247  2e-64  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009068  PICST_28533  Multifunctional pyrimidine synthesis protein CAD (includes carbamoyl-phophate synthetase, aspartate transcarbamylase, and glutamine amidotransferase)  38.08 
 
 
428 aa  248  2e-64  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal 
 
 
-
 
NC_008527  LACR_1709  carbamoyl phosphate synthase small subunit  37.19 
 
 
357 aa  247  2e-64  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0615  carbamoyl-phosphate synthase, small subunit  38.08 
 
 
360 aa  247  2e-64  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_1088  carbamoyl phosphate synthase small subunit  39.44 
 
 
362 aa  247  2e-64  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_2913  carbamoyl-phosphate synthase, small subunit  38.84 
 
 
351 aa  246  3e-64  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  35.23 
 
 
367 aa  246  3e-64  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0951  carbamoyl-phosphate synthase, small subunit  38.52 
 
 
352 aa  246  4e-64  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.00000000113034  n/a   
 
 
-
 
NC_008751  Dvul_0268  carbamoyl phosphate synthase small subunit  36.1 
 
 
375 aa  246  4e-64  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.583908 
 
 
-
 
NC_008261  CPF_2898  carbamoyl phosphate synthase small subunit  36.39 
 
 
349 aa  245  6.999999999999999e-64  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_011688  PHATRDRAFT_39528  predicted protein  37.47 
 
 
1542 aa  244  9.999999999999999e-64  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1261  carbamoyl phosphate synthase small subunit  36.77 
 
 
366 aa  245  9.999999999999999e-64  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_1286  carbamoyl phosphate synthase small subunit  36.77 
 
 
366 aa  245  9.999999999999999e-64  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.510283  n/a   
 
 
-
 
NC_009046  PICST_90563  multifunctional pyrimidine biosynthesis protein (PYR1)  38.78 
 
 
2211 aa  244  9.999999999999999e-64  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal  0.0682407 
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  34.97 
 
 
380 aa  244  1.9999999999999999e-63  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  34.97 
 
 
380 aa  244  1.9999999999999999e-63  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009012  Cthe_1867  carbamoyl-phosphate synthase small subunit  38.78 
 
 
354 aa  244  1.9999999999999999e-63  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_2483  carbamoyl-phosphate synthase, small subunit  38.06 
 
 
359 aa  244  1.9999999999999999e-63  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.0000863462  n/a   
 
 
-
 
NC_010718  Nther_2445  carbamoyl-phosphate synthase, small subunit  38.01 
 
 
399 aa  244  1.9999999999999999e-63  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  35.47 
 
 
384 aa  244  1.9999999999999999e-63  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  36.46 
 
 
369 aa  244  1.9999999999999999e-63  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_009634  Mevan_0901  carbamoyl phosphate synthase small subunit  37.47 
 
 
369 aa  243  5e-63  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_008553  Mthe_1255  carbamoyl phosphate synthase small subunit  38.92 
 
 
361 aa  242  7e-63  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_011769  DvMF_2370  carbamoyl phosphate synthase small subunit  35.66 
 
 
376 aa  241  1e-62  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.82733 
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  35.43 
 
 
376 aa  240  2.9999999999999997e-62  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  35.23 
 
 
369 aa  240  2.9999999999999997e-62  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_008816  A9601_09091  carbamoyl phosphate synthase small subunit  35.53 
 
 
379 aa  240  2.9999999999999997e-62  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.347132  n/a   
 
 
-
 
NC_013946  Mrub_2703  carbamoyl-phosphate synthase small subunit  37.3 
 
 
388 aa  239  4e-62  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.614253 
 
 
-
 
NC_007519  Dde_3646  carbamoyl phosphate synthase small subunit  35.26 
 
 
375 aa  239  5.999999999999999e-62  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_010644  Emin_1032  carbamoyl-phosphate synthase, small subunit  35.29 
 
 
390 aa  239  8e-62  Elusimicrobium minutum Pei191  Bacteria  normal  normal 
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  34.5 
 
 
369 aa  238  1e-61  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  36.03 
 
 
386 aa  238  2e-61  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  34.32 
 
 
367 aa  237  2e-61  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  36.32 
 
 
386 aa  237  3e-61  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_009972  Haur_4242  carbamoyl-phosphate synthase, small subunit  35.34 
 
 
376 aa  236  4e-61  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011699  PHATRDRAFT_24195  CPS III, carbamoyl-phosphate synthase mitochindrial precursor  37.57 
 
 
1463 aa  235  8e-61  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  35.37 
 
 
372 aa  235  1.0000000000000001e-60  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  33.87 
 
 
371 aa  235  1.0000000000000001e-60  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_008148  Rxyl_1478  carbamoyl-phosphate synthase small subunit  36.68 
 
 
369 aa  235  1.0000000000000001e-60  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.515532  n/a   
 
 
-
 
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