| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0836 |
|---|
| Symbol | |
|---|
| ID | 5328340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 808564 |
|---|
| End bp | 809664 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640793366 |
|---|
| Product | carbamoyl phosphate synthase small subunit |
|---|
| Protein accession | YP_001330054 |
|---|
| Protein GI | 150402760 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
|---|
| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.498309 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGGAA TTTTAGTTTT GGAAGACGGC ACCATCATCA GAGGGGATGG ATTTGGTGCA
GAAGCCGAAG TGCTCGGTGA ACTCGTATTT AACACTTCCA TGACAGGATA TGTTGAGATA
TTAACTGACC CCTCATACAA GGGCCAGATT ATTACAATGA CTTATCCTTT GGAAGGAAAT
TACGGTGTTG AAAAGGAATG GTTTGAAAGT GACGGAATTA AAGCAGAAGG ATTCGTTGTA
AAAGATATGA CTGGATTAGA ACTCGACGAA TTTTTAAAAG AATACAATAT TCCGGGAATT
TCAGGCGTAG ACACGAGATA TATTACAAGA AAAATAAGAT CAAAAGGAGT TATTAGATCC
CTCTTAAAAA CGTCCACCAA CCCGATAACT AAAGATGAAG AAACAGAATT AATTAAAAAA
GTAGTAGAAT ACCCAGATAT TTCAGAAATC GACCTTGTTC CTGAAGTGTC CACTAAAGAA
ACAGTTACAT ACAACGCAGA AAATGAAAAA ACAAGTTGCG TCCTTATCGA TTGCGGAGTA
AAACAGAGCA TTGTAAACTG CCTCGTTGAA AGGGGATGCA GTGTTATAAA AGTTCCATAC
AACTCTAAAA AAGAAGAAAT TTTATCATAC AACCCAGACT TTGTACTTGT TTCAAACGGC
CCTGGAGACC CTGAAAACAT GCTTGAAACG GTAGATACCG TTAAAAATTT AATTGGAACA
CTCCCAGTTA CAGGAATTTG CCTTGGCCAC CAGCTAATTA CAATAGCACT TGGAGGAAAA
ACCTACAAGT TAAAATTCGG CCACAGGGGC GGAAACCAGC CTGTAAAAGA TATTGAGTCT
GGAAAAGTGT ACATCACATC CCAAAACCAC GGATTTGCTA CTGATGATAA AATAGTTCCA
GCAGGTTCAG AACTGATGCA CATGAATTTA AACGATGATA CAGTTGAAGG AATAAGAAAA
ATTGAATCAG AAGACATCAA AAATACAGTG TGGAGTGTTC AGTACCACCC AGAAGCAGGT
CCTGGTCCAC ATGATGCTAG ATTCCTCTTT GATGAAATGG TTGAACTTGG AATTAAGTTT
AAAGCAGAAA AAGCATACTA A
|
|---|
| Protein sequence | MYGILVLEDG TIIRGDGFGA EAEVLGELVF NTSMTGYVEI LTDPSYKGQI ITMTYPLEGN
YGVEKEWFES DGIKAEGFVV KDMTGLELDE FLKEYNIPGI SGVDTRYITR KIRSKGVIRS
LLKTSTNPIT KDEETELIKK VVEYPDISEI DLVPEVSTKE TVTYNAENEK TSCVLIDCGV
KQSIVNCLVE RGCSVIKVPY NSKKEEILSY NPDFVLVSNG PGDPENMLET VDTVKNLIGT
LPVTGICLGH QLITIALGGK TYKLKFGHRG GNQPVKDIES GKVYITSQNH GFATDDKIVP
AGSELMHMNL NDDTVEGIRK IESEDIKNTV WSVQYHPEAG PGPHDARFLF DEMVELGIKF
KAEKAY
|
|---|
| |