More than 300 homologs were found in PanDaTox collection
for query gene Lcho_0987 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_0987  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
597 aa  1196    Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012560  Avin_14270  acyl-CoA dehydrogenase  56.19 
 
 
585 aa  590  1e-167  Azotobacter vinelandii DJ  Bacteria  normal  0.0419167  n/a   
 
 
-
 
NC_007908  Rfer_0264  acyl-CoA dehydrogenase-like  54.76 
 
 
569 aa  543  1e-153  Rhodoferax ferrireducens T118  Bacteria  normal  0.39187  n/a   
 
 
-
 
NC_009512  Pput_2404  acyl-CoA dehydrogenase domain-containing protein  52.18 
 
 
581 aa  536  1e-151  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_2761  acyl-CoA dehydrogenase domain-containing protein  53.55 
 
 
596 aa  534  1e-150  Delftia acidovorans SPH-1  Bacteria  normal  0.431568  normal 
 
 
-
 
NC_007973  Rmet_0385  acyl-CoA dehydrogenase-like protein  46.85 
 
 
595 aa  530  1e-149  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.13259 
 
 
-
 
NC_003295  RSc0473  putative acyl-CoA dehydrogenase oxidoreductase protein  47.14 
 
 
595 aa  527  1e-148  Ralstonia solanacearum GMI1000  Bacteria  normal  0.390432  normal 
 
 
-
 
NC_010508  Bcenmc03_2748  acyl-CoA dehydrogenase domain-containing protein  47.91 
 
 
595 aa  525  1e-148  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.139086  normal 
 
 
-
 
NC_008060  Bcen_2109  acyl-CoA dehydrogenase-like  47.91 
 
 
595 aa  525  1e-148  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2721  acyl-CoA dehydrogenase domain-containing protein  47.91 
 
 
595 aa  525  1e-148  Burkholderia cenocepacia HI2424  Bacteria  normal  0.440911  n/a   
 
 
-
 
NC_002947  PP_3354  acyl-CoA dehydrogenase, ferrulic acid biotransformation protein, putative  52.1 
 
 
584 aa  524  1e-147  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0578  acyl-CoA dehydrogenase domain-containing protein  48.07 
 
 
595 aa  525  1e-147  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_0695  acyl-CoA dehydrogenase domain-containing protein  47.58 
 
 
595 aa  523  1e-147  Burkholderia pseudomallei 1106a  Bacteria  normal  0.832914  n/a   
 
 
-
 
NC_006348  BMA0197  acyl-CoA dehydrogenase domain-containing protein  47.58 
 
 
595 aa  523  1e-147  Burkholderia mallei ATCC 23344  Bacteria  normal  0.908056  n/a   
 
 
-
 
NC_008836  BMA10229_A2330  acyl-CoA dehydrogenase domain-containing protein  47.58 
 
 
595 aa  523  1e-147  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0857  acyl-CoA dehydrogenase domain-containing protein  47.58 
 
 
595 aa  523  1e-147  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0680  acyl-CoA dehydrogenase domain-containing protein  47.58 
 
 
595 aa  523  1e-147  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2639  acyl-CoA dehydrogenase domain-containing protein  48.24 
 
 
595 aa  524  1e-147  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0601004  normal  0.257028 
 
 
-
 
NC_008785  BMASAVP1_A2748  acyl-CoA dehydrogenase domain-containing protein  47.58 
 
 
595 aa  523  1e-147  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2410  acyl-CoA dehydrogenase domain-containing protein  47.58 
 
 
595 aa  523  1e-147  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0564  acyl-CoA dehydrogenase domain-containing protein  47.25 
 
 
595 aa  521  1e-146  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0385  acyl-CoA dehydrogenase domain-containing protein  47.16 
 
 
595 aa  520  1e-146  Burkholderia phymatum STM815  Bacteria  normal  0.840786  normal  0.461604 
 
 
-
 
NC_010501  PputW619_2051  acyl-CoA dehydrogenase domain-containing protein  51.01 
 
 
582 aa  518  1e-146  Pseudomonas putida W619  Bacteria  normal  0.763745  normal  0.942384 
 
 
-
 
NC_007347  Reut_A0446  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  46.19 
 
 
595 aa  516  1.0000000000000001e-145  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A6048  Acyl-CoA dehydrogenase-like  47.25 
 
 
599 aa  518  1.0000000000000001e-145  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4038  putative acyl-CoA dehydrogenase oxidoreductase  47.33 
 
 
595 aa  515  1.0000000000000001e-145  Burkholderia xenovorans LB400  Bacteria  normal  0.922091  normal  0.0585748 
 
 
-
 
NC_012856  Rpic12D_0363  acyl-CoA dehydrogenase domain protein  45.91 
 
 
595 aa  512  1e-144  Ralstonia pickettii 12D  Bacteria  normal  0.84094  normal 
 
 
-
 
NC_008782  Ajs_0592  acyl-CoA dehydrogenase domain-containing protein  47.21 
 
 
598 aa  512  1e-144  Acidovorax sp. JS42  Bacteria  normal  normal  0.559108 
 
 
-
 
NC_008786  Veis_1224  acyl-CoA dehydrogenase domain-containing protein  47.37 
 
 
598 aa  513  1e-144  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0348  acyl-CoA dehydrogenase domain protein  45.74 
 
 
595 aa  510  1e-143  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_3477  acyl-CoA dehydrogenase domain-containing protein  46.38 
 
 
598 aa  509  1e-143  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.865632 
 
 
-
 
NC_007948  Bpro_3957  acyl-CoA dehydrogenase-like  46.22 
 
 
598 aa  509  1e-143  Polaromonas sp. JS666  Bacteria  normal  0.574903  normal 
 
 
-
 
NC_010524  Lcho_4032  acyl-CoA dehydrogenase domain-containing protein  49.11 
 
 
596 aa  509  1e-143  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000200788 
 
 
-
 
NC_010681  Bphyt_0661  acyl-CoA dehydrogenase domain protein  46.5 
 
 
595 aa  506  9.999999999999999e-143  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0419  putative acyl-CoA dehydrogenase oxidoreductase protein  46.48 
 
 
596 aa  505  9.999999999999999e-143  Methylibium petroleiphilum PM1  Bacteria  normal  0.232992  normal 
 
 
-
 
NC_007908  Rfer_3519  acyl-CoA dehydrogenase-like  47.16 
 
 
598 aa  506  9.999999999999999e-143  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0571  acyl-CoA dehydrogenase domain protein  46.53 
 
 
598 aa  504  1e-141  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0810  acyl-CoA dehydrogenase domain protein  45.9 
 
 
598 aa  501  1e-140  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4089  acyl-CoA dehydrogenase domain-containing protein  44.83 
 
 
601 aa  496  1e-139  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4406  acyl-CoA dehydrogenase domain protein  51.91 
 
 
589 aa  496  1e-139  Variovorax paradoxus S110  Bacteria  normal  0.277319  n/a   
 
 
-
 
NC_010531  Pnec_0962  acyl-CoA dehydrogenase domain protein  44.72 
 
 
595 aa  494  9.999999999999999e-139  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3118  acyl-CoA dehydrogenase-like  54.65 
 
 
575 aa  493  9.999999999999999e-139  Polaromonas sp. JS666  Bacteria  normal  0.042843  normal  0.221606 
 
 
-
 
NC_008781  Pnap_0806  acyl-CoA dehydrogenase domain-containing protein  52.17 
 
 
563 aa  489  1e-137  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3101  acyl-CoA dehydrogenase domain-containing protein  48.21 
 
 
592 aa  487  1e-136  Pseudomonas mendocina ymp  Bacteria  normal  0.165418  normal 
 
 
-
 
NC_010002  Daci_1337  acyl-CoA dehydrogenase domain-containing protein  44.44 
 
 
601 aa  488  1e-136  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4445  acyl-CoA dehydrogenase domain-containing protein  45.36 
 
 
626 aa  473  1e-132  Xanthobacter autotrophicus Py2  Bacteria  normal  0.744679  normal  0.0140421 
 
 
-
 
NC_012792  Vapar_5356  acyl-CoA dehydrogenase domain protein  46.66 
 
 
592 aa  471  1.0000000000000001e-131  Variovorax paradoxus S110  Bacteria  normal  0.253086  n/a   
 
 
-
 
NC_008025  Dgeo_0105  acyl-CoA dehydrogenase-like protein  46.22 
 
 
612 aa  463  1e-129  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_0500  acyl-CoA dehydrogenase family protein  44.86 
 
 
601 aa  459  9.999999999999999e-129  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.837085  n/a   
 
 
-
 
NC_008463  PA14_06600  putative acyl-CoA dehydrogenase  44.8 
 
 
601 aa  461  9.999999999999999e-129  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5170  Acyl-CoA dehydrogenase-like  45.1 
 
 
601 aa  461  9.999999999999999e-129  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.131109  normal  0.317042 
 
 
-
 
NC_010322  PputGB1_0398  acyl-CoA dehydrogenase domain-containing protein  45.91 
 
 
601 aa  460  9.999999999999999e-129  Pseudomonas putida GB-1  Bacteria  normal  0.257074  normal 
 
 
-
 
NC_002947  PP_0368  acyl-CoA dehydrogenase domain-containing protein  45.73 
 
 
601 aa  458  1e-127  Pseudomonas putida KT2440  Bacteria  normal  0.335716  normal 
 
 
-
 
NC_012560  Avin_45920  acyl-CoA dehydrogenase  47 
 
 
601 aa  456  1e-127  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4834  acyl-CoA dehydrogenase domain-containing protein  45.73 
 
 
601 aa  458  1e-127  Pseudomonas putida W619  Bacteria  normal  normal  0.649579 
 
 
-
 
NC_007005  Psyr_4681  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  45.1 
 
 
601 aa  457  1e-127  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1308  Acyl-CoA dehydrogenase  46.52 
 
 
596 aa  458  1e-127  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.135322  n/a   
 
 
-
 
NC_009656  PSPA7_0609  putative acyl-CoA dehydrogenase  45 
 
 
592 aa  456  1e-127  Pseudomonas aeruginosa PA7  Bacteria  normal  0.666513  n/a   
 
 
-
 
NC_009656  PSPA7_0606  putative acyl-CoA dehydrogenase  44.44 
 
 
601 aa  458  1e-127  Pseudomonas aeruginosa PA7  Bacteria  normal  0.941769  n/a   
 
 
-
 
NC_009512  Pput_0394  acyl-CoA dehydrogenase domain-containing protein  45.73 
 
 
601 aa  458  1e-127  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_3797  acyl-CoA dehydrogenase domain-containing protein  44.21 
 
 
596 aa  452  1.0000000000000001e-126  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.163707 
 
 
-
 
NC_008577  Shewana3_2552  acyl-CoA dehydrogenase domain-containing protein  47.6 
 
 
596 aa  452  1.0000000000000001e-126  Shewanella sp. ANA-3  Bacteria  normal  0.0690519  normal 
 
 
-
 
NC_009654  Mmwyl1_1571  acyl-CoA dehydrogenase domain-containing protein  44.52 
 
 
601 aa  453  1.0000000000000001e-126  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.0000982993 
 
 
-
 
NC_008463  PA14_06640  putative acyl-CoA dehydrogenase  45 
 
 
592 aa  454  1.0000000000000001e-126  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_2768  acyl-CoA dehydrogenase family protein  46.59 
 
 
596 aa  449  1e-125  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_2459  acyl-CoA dehydrogenase domain-containing protein  47.6 
 
 
596 aa  450  1e-125  Shewanella sp. MR-7  Bacteria  normal  hitchhiker  0.00932419 
 
 
-
 
NC_009656  PSPA7_0607  putative acyl-CoA dehydrogenase  44.85 
 
 
598 aa  446  1.0000000000000001e-124  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_4081  acyl-CoA dehydrogenase domain-containing protein  43.09 
 
 
601 aa  448  1.0000000000000001e-124  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2750  acyl-CoA dehydrogenase domain-containing protein  44.39 
 
 
599 aa  447  1.0000000000000001e-124  Marinobacter aquaeolei VT8  Bacteria  unclonable  0.000084613  n/a   
 
 
-
 
NC_009484  Acry_0007  acyl-CoA dehydrogenase domain-containing protein  45.99 
 
 
596 aa  446  1.0000000000000001e-124  Acidiphilium cryptum JF-5  Bacteria  normal  0.419421  n/a   
 
 
-
 
NC_008463  PA14_09630  putative acyl-CoA dehydrogenase  44.12 
 
 
593 aa  446  1.0000000000000001e-124  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.806665  normal 
 
 
-
 
NC_008463  PA14_06620  putative acyl-CoA dehydrogenase  44.1 
 
 
598 aa  448  1.0000000000000001e-124  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_25210  acyl-CoA dehydrogenase  45.58 
 
 
591 aa  442  1e-123  Azotobacter vinelandii DJ  Bacteria  normal  0.885326  n/a   
 
 
-
 
NC_009052  Sbal_1726  acyl-CoA dehydrogenase domain-containing protein  51.27 
 
 
596 aa  442  1e-123  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0400  acyl-CoA dehydrogenase domain-containing protein  44.66 
 
 
592 aa  444  1e-123  Pseudomonas putida GB-1  Bacteria  normal  normal  0.672876 
 
 
-
 
NC_011663  Sbal223_2566  acyl-CoA dehydrogenase domain protein  51.27 
 
 
596 aa  442  1e-123  Shewanella baltica OS223  Bacteria  hitchhiker  0.00594798  hitchhiker  0.000173017 
 
 
-
 
NC_008321  Shewmr4_2387  acyl-CoA dehydrogenase domain-containing protein  47.07 
 
 
596 aa  445  1e-123  Shewanella sp. MR-4  Bacteria  normal  0.109961  normal 
 
 
-
 
NC_010501  PputW619_4832  acyl-CoA dehydrogenase domain-containing protein  44.62 
 
 
592 aa  444  1e-123  Pseudomonas putida W619  Bacteria  normal  normal  0.946881 
 
 
-
 
NC_009665  Shew185_1723  acyl-CoA dehydrogenase domain-containing protein  51.27 
 
 
596 aa  442  9.999999999999999e-123  Shewanella baltica OS185  Bacteria  normal  0.0115108  n/a   
 
 
-
 
NC_007492  Pfl01_5167  Acyl-CoA dehydrogenase-like  43.13 
 
 
598 aa  439  9.999999999999999e-123  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0783661 
 
 
-
 
NC_009997  Sbal195_1766  acyl-CoA dehydrogenase domain-containing protein  51.06 
 
 
596 aa  440  9.999999999999999e-123  Shewanella baltica OS195  Bacteria  normal  0.0439337  normal  0.311175 
 
 
-
 
NC_009512  Pput_0396  acyl-CoA dehydrogenase domain-containing protein  44.39 
 
 
592 aa  440  9.999999999999999e-123  Pseudomonas putida F1  Bacteria  normal  0.352257  normal 
 
 
-
 
NC_009092  Shew_2164  acyl-CoA dehydrogenase domain-containing protein  45.99 
 
 
596 aa  442  9.999999999999999e-123  Shewanella loihica PV-4  Bacteria  normal  normal  0.764228 
 
 
-
 
NC_009438  Sputcn32_1589  acyl-CoA dehydrogenase domain-containing protein  50.85 
 
 
596 aa  439  9.999999999999999e-123  Shewanella putrefaciens CN-32  Bacteria  normal  0.286269  n/a   
 
 
-
 
NC_002947  PP_0370  acyl-CoA dehydrogenase domain-containing protein  44.46 
 
 
592 aa  438  1e-121  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2665  acyl-CoA dehydrogenase domain-containing protein  45.94 
 
 
592 aa  438  1e-121  Pseudomonas putida F1  Bacteria  normal  0.755851  normal 
 
 
-
 
NC_007492  Pfl01_5166  Acyl-CoA dehydrogenase-like  44.31 
 
 
592 aa  437  1e-121  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.164353 
 
 
-
 
NC_007912  Sde_1885  putative acyl-CoA dehydrogenase  42.38 
 
 
595 aa  436  1e-121  Saccharophagus degradans 2-40  Bacteria  normal  0.137162  normal 
 
 
-
 
NC_009439  Pmen_4079  acyl-CoA dehydrogenase domain-containing protein  43.75 
 
 
592 aa  437  1e-121  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0462  acyl-CoA dehydrogenase domain-containing protein  41.5 
 
 
597 aa  437  1e-121  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.29438  normal 
 
 
-
 
NC_009512  Pput_3693  acyl-CoA dehydrogenase domain-containing protein  45.83 
 
 
591 aa  438  1e-121  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_2868  acyl-CoA dehydrogenase domain-containing protein  44.06 
 
 
592 aa  437  1e-121  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.259312 
 
 
-
 
NC_010581  Bind_1754  acyl-CoA dehydrogenase domain-containing protein  43.09 
 
 
594 aa  437  1e-121  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0420795 
 
 
-
 
NC_010322  PputGB1_2368  acyl-CoA dehydrogenase domain-containing protein  45.44 
 
 
589 aa  437  1e-121  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2808  acyl-CoA dehydrogenase domain-containing protein  46.42 
 
 
592 aa  436  1e-121  Pseudomonas putida GB-1  Bacteria  normal  0.566358  normal 
 
 
-
 
NC_008740  Maqu_0515  acyl-CoA dehydrogenase domain-containing protein  45.08 
 
 
591 aa  434  1e-120  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2696  acyl-CoA dehydrogenase domain-containing protein  43.76 
 
 
596 aa  432  1e-120  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_2105  acyl-CoA dehydrogenase-like  46.75 
 
 
600 aa  432  1e-120  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0867626  n/a   
 
 
-
 
NC_007912  Sde_3132  acyl-CoA dehydrogenase family protein  42.74 
 
 
589 aa  434  1e-120  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2431  acyl-CoA dehydrogenase-like protein  43.55 
 
 
603 aa  432  1e-120  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
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