| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1589 |
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| Symbol | |
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| ID | 5079549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1806842 |
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| End bp | 1808632 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640498722 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001183113 |
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| Protein GI | 146292689 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.286269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGTCT ATCAAGCGCC GCTGCGCGAC TATCAATTTA TCCTCGATGA GATGTTACAT
ATTTATCAGC AAGATGCACT CAAGGGGTTC GATGAAATCG ACCCAGATCT TGTCGATGCG
ATCCTGCAAG GTATGGCCGA CTTTAGTACT GAAGTGATGT TACCGCTCAA TAGTGTCGGC
GATCTGCAGG GCTGTAAGTT GGTCGATGGT AAGGTGATTA CGCCTGAGGG TTTTGATAAT
GCCTATCGGC AGTTTGTTGA TAATGGCTGG CCGACGCTGA CCTGCGATCC TGAATATGGC
GGCCAAGGTT TACCCGAAGT GGTGGGGATT TTTGCCACTG AGATACAAAC GGCAACCAAT
ATGGCCTTTG CCATGTATCC CGGTTTGACC CATGGCGCCT ATGCCGCCAT CCATGCCCAC
GGCAGTGACG CACTCAAGCA AAAATATTTA AGCAAATTAG TCAGCGGTGA ATGGACGGGA
ACCATGAACT TGACTGAGTC CCACGCCGGT ACTGACTTAG CCTTATTACG CACGAAAGCT
GTGCCAGTAT CTGAAGGTGT TTTTGCTATT ACCGGCGAGA AAATTTTTAT CTCCTCAGGC
GATCATCAAC TCACCGACAA TATAGTGCAC CTCGTATTAG CCCGTTTGCC GGATGCACCT
GAAGGCGTGA AGGGCATATC TTTGTTCGCC GTGCCTAAAG TATTAGTGAA TAACGATGGT
AGTTTAGGCG CGCCGAACAC TTTATATGCC AGTGGCCTTG AACATAAGAT GGGCATTCAC
GGTAACTCAA CTTGTGTGAT GGTGTTTGAA GATGCGCTGG GCGAGCTTGT CGGCGAGCCA
CACCAAGGAC TGCCCGCCAT GTTTACTATG ATGAACCAAG CGCGTTTAGG GGTTGGTGTG
CAAGGACTGG GCGTCTCTGA AATCGCCTAT CAAAATGCGC TGGCCTATGC CAAAGACAGA
TTACAGAGCC GCGCTTTAAG CGGTGCCAAA GCCCCAGAAA AAGCCGCCGA TCCGATTTTG
GTTCACGGCG ATGTGCGCCG CATGTTGCTG TCGCAAAAAG CCTTTAATGA AGGCGCAAGA
GCCTTAGTTG GACAACAAGC TTTGTGGCTA GATGAAGCTG AGCGTCATAC CGATCCCGTC
AAAGCCAAAG TTGCTTCCCA ATTAGCGGCA CTGTTCACGC CAGTGGTGAA AGGTTTTATC
ACTAACCGTG GTTTTAATGC CTGTGTCGAT GCACAGCAAG TGTTTGGCGG ACATGGTTAT
ATTCATGAGT GGGGTATGGA ACAATTTGTG CGTGATAGCC GTATTGCACT GATTTATGAA
GGCACTAACG GCATTCAAGC GTTAGATTTA GTGGGCCGTA AGTTGCTTAG CGACCGCGGC
GCGGCGATGC AGCAATGGTC GGCGTTAGTG ACTGAGTTTA TAAAGTCACA TAGCACGAAT
GCGGCGATGC AACCTTACGT GAGCGGTTTA ATGGATTGTG CGGGTGATTT GCAAAAGGCC
AGTGGTTATT TAGCTGCACA AGCTGCGACC AATCCTGACA TTATCGGCGC AGCCTCTATG
GCTTATCTGG AGTTGTTTGG GGTGACGGCG CTGGCGTGGA TGTGGGCCAG AAGCGCCGCG
GTGGCATTAG CTGCACTGGA GCTGGGCACT GAAGAAACCG CATTTTACCA AGCTAAATTG
AAAACGGCCG ATTTCTATAT GGCTTACTGG GCGGTGCAAG GTCGCAGTCT GCGTAAGCAA
ATTGAGCAGG CGAGTGAGAT GCTAACATCG CTTGATGAAA GTATTTTTTA A
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| Protein sequence | MPVYQAPLRD YQFILDEMLH IYQQDALKGF DEIDPDLVDA ILQGMADFST EVMLPLNSVG
DLQGCKLVDG KVITPEGFDN AYRQFVDNGW PTLTCDPEYG GQGLPEVVGI FATEIQTATN
MAFAMYPGLT HGAYAAIHAH GSDALKQKYL SKLVSGEWTG TMNLTESHAG TDLALLRTKA
VPVSEGVFAI TGEKIFISSG DHQLTDNIVH LVLARLPDAP EGVKGISLFA VPKVLVNNDG
SLGAPNTLYA SGLEHKMGIH GNSTCVMVFE DALGELVGEP HQGLPAMFTM MNQARLGVGV
QGLGVSEIAY QNALAYAKDR LQSRALSGAK APEKAADPIL VHGDVRRMLL SQKAFNEGAR
ALVGQQALWL DEAERHTDPV KAKVASQLAA LFTPVVKGFI TNRGFNACVD AQQVFGGHGY
IHEWGMEQFV RDSRIALIYE GTNGIQALDL VGRKLLSDRG AAMQQWSALV TEFIKSHSTN
AAMQPYVSGL MDCAGDLQKA SGYLAAQAAT NPDIIGAASM AYLELFGVTA LAWMWARSAA
VALAALELGT EETAFYQAKL KTADFYMAYW AVQGRSLRKQ IEQASEMLTS LDESIF
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