More than 300 homologs were found in PanDaTox collection
for query gene Krad_4020 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_4020  two component transcriptional regulator, LuxR family  100 
 
 
215 aa  406  1.0000000000000001e-112  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.000894251  normal  0.0789775 
 
 
-
 
NC_009664  Krad_1992  two component transcriptional regulator, LuxR family  85.12 
 
 
218 aa  350  8e-96  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2250  two component transcriptional regulator, LuxR family  69.34 
 
 
217 aa  285  2.9999999999999996e-76  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137071 
 
 
-
 
NC_013093  Amir_4689  two component transcriptional regulator, LuxR family  80.09 
 
 
216 aa  271  5.000000000000001e-72  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1653  response regulator receiver protein  62.2 
 
 
220 aa  242  3e-63  Streptosporangium roseum DSM 43021  Bacteria  normal  0.799733  normal 
 
 
-
 
NC_013595  Sros_2300  response regulator receiver protein  60.48 
 
 
213 aa  228  7e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0198  two component transcriptional regulator, LuxR family  59.52 
 
 
218 aa  226  3e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3717  two component transcriptional regulator, LuxR family  59.33 
 
 
217 aa  226  3e-58  Conexibacter woesei DSM 14684  Bacteria  normal  0.82478  normal 
 
 
-
 
NC_013510  Tcur_3933  two component transcriptional regulator, LuxR family  58.85 
 
 
218 aa  224  1e-57  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2506  response regulator receiver protein  57.35 
 
 
223 aa  220  9.999999999999999e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.189025  normal  0.663488 
 
 
-
 
NC_013510  Tcur_4729  two component transcriptional regulator, LuxR family  57.62 
 
 
212 aa  219  1.9999999999999999e-56  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0610  two component transcriptional regulator, LuxR family  56.94 
 
 
215 aa  219  3e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.440854 
 
 
-
 
NC_009953  Sare_0423  two component LuxR family transcriptional regulator  61.03 
 
 
213 aa  218  5e-56  Salinispora arenicola CNS-205  Bacteria  normal  0.450903  hitchhiker  0.0058743 
 
 
-
 
NC_013739  Cwoe_3908  two component transcriptional regulator, LuxR family  56.67 
 
 
214 aa  217  8.999999999999998e-56  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2092  two component transcriptional regulator, LuxR family  55.35 
 
 
216 aa  217  1e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0948  two component transcriptional regulator, LuxR family  57.55 
 
 
214 aa  216  2e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2641  two component transcriptional regulator, LuxR family  59.35 
 
 
220 aa  216  2.9999999999999998e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.53526  normal 
 
 
-
 
NC_009921  Franean1_7246  two component LuxR family transcriptional regulator  56.13 
 
 
215 aa  216  2.9999999999999998e-55  Frankia sp. EAN1pec  Bacteria  normal  normal  0.172833 
 
 
-
 
NC_013093  Amir_2757  two component transcriptional regulator, LuxR family  63.98 
 
 
214 aa  214  7e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0593961  n/a   
 
 
-
 
NC_013739  Cwoe_3762  two component transcriptional regulator, LuxR family  56.88 
 
 
221 aa  213  1.9999999999999998e-54  Conexibacter woesei DSM 14684  Bacteria  normal  0.355338  normal  0.813095 
 
 
-
 
NC_009380  Strop_2758  response regulator receiver  55.4 
 
 
220 aa  213  1.9999999999999998e-54  Salinispora tropica CNB-440  Bacteria  normal  0.21835  normal  0.0217102 
 
 
-
 
NC_013595  Sros_4051  response regulator receiver protein  55.92 
 
 
214 aa  212  2.9999999999999995e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  hitchhiker  0.004601 
 
 
-
 
NC_014165  Tbis_3545  LuxR family two component transcriptional regulator  58.37 
 
 
213 aa  212  3.9999999999999995e-54  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.701363 
 
 
-
 
NC_008726  Mvan_0263  two component LuxR family transcriptional regulator  55.92 
 
 
214 aa  212  3.9999999999999995e-54  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.103764 
 
 
-
 
NC_009380  Strop_0353  two component LuxR family transcriptional regulator  59.05 
 
 
213 aa  212  3.9999999999999995e-54  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6137  response regulator receiver protein  60 
 
 
209 aa  211  9e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.633642  normal  0.13111 
 
 
-
 
NC_013131  Caci_1254  two component transcriptional regulator, LuxR family  57.42 
 
 
213 aa  210  1e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3862  two component transcriptional regulator, LuxR family  56.87 
 
 
213 aa  209  2e-53  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00236143  normal 
 
 
-
 
NC_013131  Caci_0203  two component transcriptional regulator, LuxR family  53.59 
 
 
218 aa  209  3e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_2299  two component LuxR family transcriptional regulator  58.29 
 
 
242 aa  209  3e-53  Frankia sp. EAN1pec  Bacteria  normal  0.0379402  normal 
 
 
-
 
NC_009664  Krad_3915  two component transcriptional regulator, LuxR family  58.85 
 
 
226 aa  208  5e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.161295  normal  0.0598624 
 
 
-
 
NC_013947  Snas_2341  two component transcriptional regulator, LuxR family  56.13 
 
 
215 aa  207  7e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3517  two component transcriptional regulator, LuxR family  54.98 
 
 
214 aa  207  1e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.498529  normal 
 
 
-
 
NC_013093  Amir_2699  two component transcriptional regulator, LuxR family  52.58 
 
 
226 aa  206  2e-52  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.000000630711  n/a   
 
 
-
 
NC_013172  Bfae_12650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.61 
 
 
217 aa  205  4e-52  Brachybacterium faecium DSM 4810  Bacteria  normal  0.129544  n/a   
 
 
-
 
NC_007333  Tfu_0330  LuxR response regulator receiver  54.46 
 
 
219 aa  204  6e-52  Thermobifida fusca YX  Bacteria  normal  0.673991  n/a   
 
 
-
 
NC_013131  Caci_4455  two component transcriptional regulator, LuxR family  58.55 
 
 
213 aa  203  1e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1960  two component transcriptional regulator, LuxR family  53.33 
 
 
215 aa  203  2e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000329107  hitchhiker  0.00000396613 
 
 
-
 
NC_013757  Gobs_2541  two component transcriptional regulator, LuxR family  50.23 
 
 
215 aa  202  2e-51  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.92112  n/a   
 
 
-
 
NC_013947  Snas_5645  two component transcriptional regulator, LuxR family  55.02 
 
 
215 aa  202  3e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.117498 
 
 
-
 
NC_013510  Tcur_4661  two component transcriptional regulator, LuxR family  57.41 
 
 
220 aa  202  3e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6197  response regulator receiver protein  55.19 
 
 
215 aa  201  9e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.376562  normal 
 
 
-
 
NC_013947  Snas_4725  two component transcriptional regulator, LuxR family  55.73 
 
 
218 aa  201  9e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.37253  normal 
 
 
-
 
NC_008146  Mmcs_3909  two component LuxR family transcriptional regulator  52.61 
 
 
211 aa  200  9.999999999999999e-51  Mycobacterium sp. MCS  Bacteria  normal  0.755905  n/a   
 
 
-
 
NC_014210  Ndas_2432  two component transcriptional regulator, LuxR family  57.21 
 
 
233 aa  200  1.9999999999999998e-50  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.199835  normal  0.129248 
 
 
-
 
NC_013521  Sked_35890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  60.51 
 
 
239 aa  199  1.9999999999999998e-50  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479689 
 
 
-
 
NC_012669  Bcav_1359  two component transcriptional regulator, LuxR family  54.63 
 
 
219 aa  199  3e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.323671 
 
 
-
 
NC_013131  Caci_1917  two component transcriptional regulator, LuxR family  54.07 
 
 
215 aa  198  5e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_3983  two component LuxR family transcriptional regulator  52.13 
 
 
214 aa  198  6e-50  Mycobacterium sp. KMS  Bacteria  normal  0.714996  normal 
 
 
-
 
NC_009077  Mjls_3924  two component LuxR family transcriptional regulator  52.13 
 
 
214 aa  198  6e-50  Mycobacterium sp. JLS  Bacteria  normal  normal  0.278782 
 
 
-
 
NC_008726  Mvan_4386  two component LuxR family transcriptional regulator  54.03 
 
 
209 aa  197  1.0000000000000001e-49  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_9330  response regulator receiver protein  55.92 
 
 
221 aa  196  2.0000000000000003e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.603744 
 
 
-
 
NC_013530  Xcel_0212  two component transcriptional regulator, LuxR family  55.81 
 
 
218 aa  196  2.0000000000000003e-49  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4416  response regulator receiver protein  56.6 
 
 
228 aa  196  2.0000000000000003e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0335955 
 
 
-
 
NC_014210  Ndas_2133  two component transcriptional regulator, LuxR family  57.35 
 
 
214 aa  195  3e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2280  two component LuxR family transcriptional regulator  52.61 
 
 
214 aa  194  7e-49  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.92337  normal  0.457915 
 
 
-
 
NC_013131  Caci_0636  two component transcriptional regulator, LuxR family  52.61 
 
 
214 aa  194  1e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.583432 
 
 
-
 
NC_013235  Namu_2928  two component transcriptional regulator, LuxR family  50.24 
 
 
243 aa  193  1e-48  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000012449  hitchhiker  0.0000084288 
 
 
-
 
NC_008541  Arth_3490  two component LuxR family transcriptional regulator  56.63 
 
 
218 aa  194  1e-48  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4605  two component transcriptional regulator, LuxR family  55.87 
 
 
222 aa  193  1e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.554224  normal 
 
 
-
 
NC_013739  Cwoe_2389  two component transcriptional regulator, LuxR family  51.9 
 
 
215 aa  193  1e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.205007  decreased coverage  0.00115827 
 
 
-
 
NC_013521  Sked_09230  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.24 
 
 
218 aa  192  3e-48  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.310613 
 
 
-
 
NC_009664  Krad_3331  two component transcriptional regulator, LuxR family  57.14 
 
 
216 aa  192  3e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0226882  normal  0.21338 
 
 
-
 
NC_009921  Franean1_4332  two component LuxR family transcriptional regulator  55.98 
 
 
225 aa  191  5e-48  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00650273  normal 
 
 
-
 
NC_013595  Sros_8722  response regulator receiver protein  52.63 
 
 
210 aa  191  6e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0307  two component transcriptional regulator, LuxR family  63.16 
 
 
214 aa  189  2e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.115356  normal  0.300779 
 
 
-
 
NC_013172  Bfae_11890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.24 
 
 
213 aa  187  9e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3103  two component transcriptional regulator, LuxR family  62.43 
 
 
223 aa  187  1e-46  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.156187  hitchhiker  0.000316121 
 
 
-
 
NC_013739  Cwoe_0320  two component transcriptional regulator, LuxR family  51.42 
 
 
218 aa  186  2e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.308686  normal  0.0930841 
 
 
-
 
NC_013235  Namu_0810  two component transcriptional regulator, LuxR family  49.53 
 
 
219 aa  185  5e-46  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0244  two component transcriptional regulator, LuxR family  53.14 
 
 
216 aa  185  5e-46  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6494  two component LuxR family transcriptional regulator  50 
 
 
235 aa  182  3e-45  Frankia sp. EAN1pec  Bacteria  normal  0.0149487  normal  0.504125 
 
 
-
 
NC_008726  Mvan_2073  two component LuxR family transcriptional regulator  49.76 
 
 
217 aa  182  4.0000000000000006e-45  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.776481 
 
 
-
 
NC_013595  Sros_3199  response regulator receiver protein  54.03 
 
 
212 aa  179  4e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0968  two component LuxR family transcriptional regulator  50 
 
 
220 aa  178  4.999999999999999e-44  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_0340  two component LuxR family transcriptional regulator  48.58 
 
 
221 aa  178  4.999999999999999e-44  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0115466 
 
 
-
 
NC_013739  Cwoe_3050  two component transcriptional regulator, LuxR family  46.89 
 
 
214 aa  177  7e-44  Conexibacter woesei DSM 14684  Bacteria  normal  0.127757  normal 
 
 
-
 
NC_008726  Mvan_5906  two component LuxR family transcriptional regulator  50 
 
 
228 aa  177  1e-43  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.363446  normal 
 
 
-
 
NC_013093  Amir_0530  two component transcriptional regulator, LuxR family  51.64 
 
 
214 aa  176  3e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0201422  n/a   
 
 
-
 
NC_013169  Ksed_17580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.13 
 
 
211 aa  174  7e-43  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0315732  normal  0.450672 
 
 
-
 
NC_009921  Franean1_7225  two component LuxR family transcriptional regulator  48.82 
 
 
229 aa  173  1.9999999999999998e-42  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1460  two component transcriptional regulator, LuxR family  47.14 
 
 
224 aa  173  1.9999999999999998e-42  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.659068  n/a   
 
 
-
 
NC_014158  Tpau_0972  two component transcriptional regulator, LuxR family  52.86 
 
 
208 aa  171  5e-42  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2524  two component transcriptional regulator, LuxR family  55.81 
 
 
228 aa  168  5e-41  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0516799  n/a   
 
 
-
 
NC_013739  Cwoe_0318  two component transcriptional regulator, LuxR family  49.31 
 
 
221 aa  167  1e-40  Conexibacter woesei DSM 14684  Bacteria  normal  0.29485  normal  0.172489 
 
 
-
 
NC_009921  Franean1_6700  two component LuxR family transcriptional regulator  50 
 
 
257 aa  162  2.0000000000000002e-39  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5165  two component transcriptional regulator, LuxR family  44.98 
 
 
214 aa  162  3e-39  Conexibacter woesei DSM 14684  Bacteria  normal  0.852017  normal 
 
 
-
 
NC_013235  Namu_3029  two component transcriptional regulator, LuxR family  44.29 
 
 
815 aa  160  9e-39  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00871852  hitchhiker  0.00628617 
 
 
-
 
NC_013235  Namu_1746  two component transcriptional regulator, LuxR family  46.48 
 
 
222 aa  155  6e-37  Nakamurella multipartita DSM 44233  Bacteria  normal  0.139209  normal  0.0305301 
 
 
-
 
NC_013169  Ksed_07220  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.41 
 
 
226 aa  152  5e-36  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.740026 
 
 
-
 
NC_009921  Franean1_2504  two component LuxR family transcriptional regulator  42.51 
 
 
218 aa  150  1e-35  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00866313  normal 
 
 
-
 
NC_007777  Francci3_0084  two component LuxR family transcriptional regulator  45.97 
 
 
239 aa  145  5e-34  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1501  two component transcriptional regulator, LuxR family  44.34 
 
 
228 aa  143  2e-33  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.138703 
 
 
-
 
NC_013595  Sros_0503  response regulator receiver protein  41.1 
 
 
226 aa  122  4e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.544154  normal 
 
 
-
 
NC_002967  TDE0149  DNA-binding response regulator  30.93 
 
 
201 aa  108  9.000000000000001e-23  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0782  two component transcriptional regulator, LuxR family  36.63 
 
 
220 aa  105  4e-22  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5262  two component transcriptional regulator, LuxR family  35.16 
 
 
219 aa  104  8e-22  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1954  two component transcriptional regulator, LuxR family  39.02 
 
 
220 aa  103  2e-21  Thauera sp. MZ1T  Bacteria  normal  0.228638  n/a   
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  39.09 
 
 
213 aa  103  2e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal 
 
 
-
 
NC_013510  Tcur_0500  two component transcriptional regulator, LuxR family  35.05 
 
 
226 aa  102  6e-21  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
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