More than 300 homologs were found in PanDaTox collection
for query gene Franean1_7225 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_7225  two component LuxR family transcriptional regulator  100 
 
 
229 aa  448  1e-125  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0084  two component LuxR family transcriptional regulator  71.89 
 
 
239 aa  283  2.0000000000000002e-75  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1460  two component transcriptional regulator, LuxR family  53.57 
 
 
224 aa  207  1e-52  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.659068  n/a   
 
 
-
 
NC_013510  Tcur_4729  two component transcriptional regulator, LuxR family  51.42 
 
 
212 aa  202  4e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0244  two component transcriptional regulator, LuxR family  52.09 
 
 
216 aa  201  9.999999999999999e-51  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_2504  two component LuxR family transcriptional regulator  50.71 
 
 
218 aa  200  1.9999999999999998e-50  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00866313  normal 
 
 
-
 
NC_009664  Krad_3915  two component transcriptional regulator, LuxR family  51.42 
 
 
226 aa  199  3.9999999999999996e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.161295  normal  0.0598624 
 
 
-
 
NC_014210  Ndas_1960  two component transcriptional regulator, LuxR family  48.11 
 
 
215 aa  194  8.000000000000001e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000329107  hitchhiker  0.00000396613 
 
 
-
 
NC_013510  Tcur_3933  two component transcriptional regulator, LuxR family  48.58 
 
 
218 aa  192  4e-48  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1653  response regulator receiver protein  47.64 
 
 
220 aa  191  6e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.799733  normal 
 
 
-
 
NC_013131  Caci_0636  two component transcriptional regulator, LuxR family  47.66 
 
 
214 aa  189  2e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.583432 
 
 
-
 
NC_014210  Ndas_3517  two component transcriptional regulator, LuxR family  49.07 
 
 
214 aa  189  2.9999999999999997e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.498529  normal 
 
 
-
 
NC_013739  Cwoe_3717  two component transcriptional regulator, LuxR family  48.58 
 
 
217 aa  189  4e-47  Conexibacter woesei DSM 14684  Bacteria  normal  0.82478  normal 
 
 
-
 
NC_012669  Bcav_1359  two component transcriptional regulator, LuxR family  50 
 
 
219 aa  189  4e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.323671 
 
 
-
 
NC_009921  Franean1_7246  two component LuxR family transcriptional regulator  49.3 
 
 
215 aa  187  8e-47  Frankia sp. EAN1pec  Bacteria  normal  normal  0.172833 
 
 
-
 
NC_013521  Sked_09230  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.32 
 
 
218 aa  187  1e-46  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.310613 
 
 
-
 
NC_013595  Sros_2506  response regulator receiver protein  47.14 
 
 
223 aa  186  3e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.189025  normal  0.663488 
 
 
-
 
NC_013235  Namu_3862  two component transcriptional regulator, LuxR family  50.7 
 
 
213 aa  186  3e-46  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00236143  normal 
 
 
-
 
NC_013235  Namu_2928  two component transcriptional regulator, LuxR family  44.1 
 
 
243 aa  185  5e-46  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000012449  hitchhiker  0.0000084288 
 
 
-
 
NC_013131  Caci_0203  two component transcriptional regulator, LuxR family  48.18 
 
 
218 aa  184  8e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3908  two component transcriptional regulator, LuxR family  45.54 
 
 
214 aa  184  9e-46  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2300  response regulator receiver protein  48.83 
 
 
213 aa  184  1.0000000000000001e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6197  response regulator receiver protein  48.37 
 
 
215 aa  183  2.0000000000000003e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.376562  normal 
 
 
-
 
NC_008726  Mvan_0263  two component LuxR family transcriptional regulator  47.89 
 
 
214 aa  183  2.0000000000000003e-45  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.103764 
 
 
-
 
NC_008726  Mvan_4386  two component LuxR family transcriptional regulator  48.1 
 
 
209 aa  182  3e-45  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2280  two component LuxR family transcriptional regulator  46.73 
 
 
214 aa  181  7e-45  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.92337  normal  0.457915 
 
 
-
 
NC_014165  Tbis_3545  LuxR family two component transcriptional regulator  49.06 
 
 
213 aa  181  1e-44  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.701363 
 
 
-
 
NC_008705  Mkms_3983  two component LuxR family transcriptional regulator  45.33 
 
 
214 aa  180  2e-44  Mycobacterium sp. KMS  Bacteria  normal  0.714996  normal 
 
 
-
 
NC_009077  Mjls_3924  two component LuxR family transcriptional regulator  45.33 
 
 
214 aa  180  2e-44  Mycobacterium sp. JLS  Bacteria  normal  normal  0.278782 
 
 
-
 
NC_008726  Mvan_2073  two component LuxR family transcriptional regulator  47.2 
 
 
217 aa  179  2.9999999999999997e-44  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.776481 
 
 
-
 
NC_007333  Tfu_0330  LuxR response regulator receiver  49.31 
 
 
219 aa  179  4e-44  Thermobifida fusca YX  Bacteria  normal  0.673991  n/a   
 
 
-
 
NC_013131  Caci_1917  two component transcriptional regulator, LuxR family  46.98 
 
 
215 aa  178  4.999999999999999e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_9330  response regulator receiver protein  48.13 
 
 
221 aa  177  8e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.603744 
 
 
-
 
NC_013172  Bfae_12650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.33 
 
 
217 aa  177  1e-43  Brachybacterium faecium DSM 4810  Bacteria  normal  0.129544  n/a   
 
 
-
 
NC_013739  Cwoe_3762  two component transcriptional regulator, LuxR family  45.58 
 
 
221 aa  177  1e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.355338  normal  0.813095 
 
 
-
 
NC_013595  Sros_8722  response regulator receiver protein  49.53 
 
 
210 aa  176  2e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2341  two component transcriptional regulator, LuxR family  47.44 
 
 
215 aa  176  2e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3490  two component LuxR family transcriptional regulator  48.4 
 
 
218 aa  175  4e-43  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0198  two component transcriptional regulator, LuxR family  45.54 
 
 
218 aa  175  4e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2092  two component transcriptional regulator, LuxR family  46.23 
 
 
216 aa  175  5e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3909  two component LuxR family transcriptional regulator  45.24 
 
 
211 aa  175  6e-43  Mycobacterium sp. MCS  Bacteria  normal  0.755905  n/a   
 
 
-
 
NC_013739  Cwoe_0320  two component transcriptional regulator, LuxR family  46.05 
 
 
218 aa  174  9e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.308686  normal  0.0930841 
 
 
-
 
NC_014151  Cfla_3103  two component transcriptional regulator, LuxR family  51.16 
 
 
223 aa  174  9.999999999999999e-43  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.156187  hitchhiker  0.000316121 
 
 
-
 
NC_013947  Snas_5645  two component transcriptional regulator, LuxR family  46.23 
 
 
215 aa  174  9.999999999999999e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.117498 
 
 
-
 
NC_013595  Sros_6137  response regulator receiver protein  48.83 
 
 
209 aa  173  1.9999999999999998e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.633642  normal  0.13111 
 
 
-
 
NC_013947  Snas_2250  two component transcriptional regulator, LuxR family  44.34 
 
 
217 aa  173  1.9999999999999998e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137071 
 
 
-
 
NC_009953  Sare_0423  two component LuxR family transcriptional regulator  47.2 
 
 
213 aa  172  3.9999999999999995e-42  Salinispora arenicola CNS-205  Bacteria  normal  0.450903  hitchhiker  0.0058743 
 
 
-
 
NC_009380  Strop_2758  response regulator receiver  43.26 
 
 
220 aa  172  5e-42  Salinispora tropica CNB-440  Bacteria  normal  0.21835  normal  0.0217102 
 
 
-
 
NC_013757  Gobs_2541  two component transcriptional regulator, LuxR family  44.19 
 
 
215 aa  171  5.999999999999999e-42  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.92112  n/a   
 
 
-
 
NC_013131  Caci_0610  two component transcriptional regulator, LuxR family  42.45 
 
 
215 aa  171  5.999999999999999e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.440854 
 
 
-
 
NC_009921  Franean1_4332  two component LuxR family transcriptional regulator  49.53 
 
 
225 aa  171  5.999999999999999e-42  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00650273  normal 
 
 
-
 
NC_013131  Caci_1254  two component transcriptional regulator, LuxR family  46.7 
 
 
213 aa  171  1e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2133  two component transcriptional regulator, LuxR family  49.53 
 
 
214 aa  169  3e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2699  two component transcriptional regulator, LuxR family  44.81 
 
 
226 aa  169  4e-41  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.000000630711  n/a   
 
 
-
 
NC_013093  Amir_0948  two component transcriptional regulator, LuxR family  45.75 
 
 
214 aa  169  4e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_0340  two component LuxR family transcriptional regulator  44.13 
 
 
221 aa  168  6e-41  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0115466 
 
 
-
 
NC_009664  Krad_1992  two component transcriptional regulator, LuxR family  45.58 
 
 
218 aa  167  1e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_35890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.44 
 
 
239 aa  166  2e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479689 
 
 
-
 
NC_013510  Tcur_4661  two component transcriptional regulator, LuxR family  47.44 
 
 
220 aa  166  4e-40  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0212  two component transcriptional regulator, LuxR family  46.79 
 
 
218 aa  165  5e-40  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2432  two component transcriptional regulator, LuxR family  46.19 
 
 
233 aa  165  5.9999999999999996e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.199835  normal  0.129248 
 
 
-
 
NC_009921  Franean1_6700  two component LuxR family transcriptional regulator  46.26 
 
 
257 aa  164  6.9999999999999995e-40  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0810  two component transcriptional regulator, LuxR family  43.98 
 
 
219 aa  164  1.0000000000000001e-39  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_2299  two component LuxR family transcriptional regulator  46.67 
 
 
242 aa  164  1.0000000000000001e-39  Frankia sp. EAN1pec  Bacteria  normal  0.0379402  normal 
 
 
-
 
NC_009380  Strop_0353  two component LuxR family transcriptional regulator  45.54 
 
 
213 aa  163  2.0000000000000002e-39  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6494  two component LuxR family transcriptional regulator  45.16 
 
 
235 aa  162  4.0000000000000004e-39  Frankia sp. EAN1pec  Bacteria  normal  0.0149487  normal  0.504125 
 
 
-
 
NC_013595  Sros_4051  response regulator receiver protein  44.86 
 
 
214 aa  160  1e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  hitchhiker  0.004601 
 
 
-
 
NC_013739  Cwoe_4605  two component transcriptional regulator, LuxR family  46.05 
 
 
222 aa  159  3e-38  Conexibacter woesei DSM 14684  Bacteria  normal  0.554224  normal 
 
 
-
 
NC_013739  Cwoe_2389  two component transcriptional regulator, LuxR family  46.01 
 
 
215 aa  159  3e-38  Conexibacter woesei DSM 14684  Bacteria  normal  0.205007  decreased coverage  0.00115827 
 
 
-
 
NC_013947  Snas_4725  two component transcriptional regulator, LuxR family  43.98 
 
 
218 aa  159  5e-38  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.37253  normal 
 
 
-
 
NC_013595  Sros_3199  response regulator receiver protein  45.71 
 
 
212 aa  158  6e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2524  two component transcriptional regulator, LuxR family  49.54 
 
 
228 aa  157  1e-37  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0516799  n/a   
 
 
-
 
NC_013739  Cwoe_5165  two component transcriptional regulator, LuxR family  42.92 
 
 
214 aa  156  2e-37  Conexibacter woesei DSM 14684  Bacteria  normal  0.852017  normal 
 
 
-
 
NC_013093  Amir_0530  two component transcriptional regulator, LuxR family  44.91 
 
 
214 aa  155  4e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0201422  n/a   
 
 
-
 
NC_013595  Sros_4416  response regulator receiver protein  43.17 
 
 
228 aa  155  5.0000000000000005e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0335955 
 
 
-
 
NC_013172  Bfae_11890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.45 
 
 
213 aa  155  5.0000000000000005e-37  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0318  two component transcriptional regulator, LuxR family  44.91 
 
 
221 aa  155  6e-37  Conexibacter woesei DSM 14684  Bacteria  normal  0.29485  normal  0.172489 
 
 
-
 
NC_013947  Snas_2641  two component transcriptional regulator, LuxR family  43.06 
 
 
220 aa  154  2e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.53526  normal 
 
 
-
 
NC_013235  Namu_3029  two component transcriptional regulator, LuxR family  41.51 
 
 
815 aa  152  4e-36  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00871852  hitchhiker  0.00628617 
 
 
-
 
NC_013093  Amir_2757  two component transcriptional regulator, LuxR family  47.66 
 
 
214 aa  152  5e-36  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0593961  n/a   
 
 
-
 
NC_009664  Krad_4020  two component transcriptional regulator, LuxR family  47.94 
 
 
215 aa  152  5e-36  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.000894251  normal  0.0789775 
 
 
-
 
NC_009664  Krad_3331  two component transcriptional regulator, LuxR family  46.01 
 
 
216 aa  150  1e-35  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0226882  normal  0.21338 
 
 
-
 
NC_013093  Amir_4689  two component transcriptional regulator, LuxR family  46.73 
 
 
216 aa  150  2e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3050  two component transcriptional regulator, LuxR family  41.98 
 
 
214 aa  150  2e-35  Conexibacter woesei DSM 14684  Bacteria  normal  0.127757  normal 
 
 
-
 
NC_009338  Mflv_0968  two component LuxR family transcriptional regulator  42.13 
 
 
220 aa  150  2e-35  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_1746  two component transcriptional regulator, LuxR family  43.98 
 
 
222 aa  149  3e-35  Nakamurella multipartita DSM 44233  Bacteria  normal  0.139209  normal  0.0305301 
 
 
-
 
NC_013131  Caci_4455  two component transcriptional regulator, LuxR family  44.86 
 
 
213 aa  149  4e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5906  two component LuxR family transcriptional regulator  42.01 
 
 
228 aa  147  9e-35  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.363446  normal 
 
 
-
 
NC_013595  Sros_0503  response regulator receiver protein  43.95 
 
 
226 aa  145  6e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.544154  normal 
 
 
-
 
NC_013169  Ksed_17580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.06 
 
 
211 aa  142  3e-33  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0315732  normal  0.450672 
 
 
-
 
NC_013739  Cwoe_1501  two component transcriptional regulator, LuxR family  40 
 
 
228 aa  142  5e-33  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.138703 
 
 
-
 
NC_013169  Ksed_07220  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41.63 
 
 
226 aa  140  9.999999999999999e-33  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.740026 
 
 
-
 
NC_014210  Ndas_0307  two component transcriptional regulator, LuxR family  44.39 
 
 
214 aa  132  3.9999999999999996e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.115356  normal  0.300779 
 
 
-
 
NC_014158  Tpau_0972  two component transcriptional regulator, LuxR family  41.04 
 
 
208 aa  126  3e-28  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_2502  response regulator receiver protein  41.75 
 
 
233 aa  119  3e-26  Frankia sp. EAN1pec  Bacteria  normal  0.0151359  normal 
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  34.84 
 
 
214 aa  116  1.9999999999999998e-25  Deinococcus geothermalis DSM 11300  Bacteria  normal  hitchhiker  0.0084678 
 
 
-
 
NC_009921  Franean1_6440  adenylate/guanylate cyclase  42.6 
 
 
463 aa  113  2.0000000000000002e-24  Frankia sp. EAN1pec  Bacteria  normal  0.084335  normal  0.0956308 
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  37.22 
 
 
225 aa  113  3e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_014210  Ndas_2024  two component transcriptional regulator, LuxR family  36.04 
 
 
220 aa  110  2.0000000000000002e-23  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.876474  normal 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  32.17 
 
 
216 aa  105  8e-22  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
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