More than 300 homologs were found in PanDaTox collection
for query gene Franean1_2918 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_2918  short-chain dehydrogenase/reductase SDR  100 
 
 
282 aa  573  1.0000000000000001e-163  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4729  short-chain dehydrogenase/reductase SDR  62.77 
 
 
274 aa  352  2.9999999999999997e-96  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_0581  short-chain dehydrogenase/reductase SDR  63.14 
 
 
274 aa  324  1e-87  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4321  short-chain dehydrogenase/reductase SDR  62.41 
 
 
274 aa  318  5e-86  Frankia sp. EAN1pec  Bacteria  normal  normal  0.435201 
 
 
-
 
NC_009511  Swit_2019  short-chain dehydrogenase/reductase SDR  40.07 
 
 
291 aa  154  1e-36  Sphingomonas wittichii RW1  Bacteria  normal  0.400564  normal 
 
 
-
 
NC_008048  Sala_0895  3-alpha-hydroxysteroid dehydrogenase  35.32 
 
 
274 aa  120  3e-26  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.013191  normal 
 
 
-
 
NC_009921  Franean1_2716  short-chain dehydrogenase/reductase SDR  36.12 
 
 
265 aa  117  1.9999999999999998e-25  Frankia sp. EAN1pec  Bacteria  normal  0.839992  normal 
 
 
-
 
NC_008146  Mmcs_3782  3-alpha-hydroxysteroid dehydrogenase  36.19 
 
 
274 aa  109  6e-23  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3786  3-alpha-hydroxysteroid dehydrogenase  36.19 
 
 
274 aa  109  6e-23  Mycobacterium sp. JLS  Bacteria  normal  0.71727  normal 
 
 
-
 
NC_008705  Mkms_3855  3-alpha-hydroxysteroid dehydrogenase  36.19 
 
 
274 aa  109  6e-23  Mycobacterium sp. KMS  Bacteria  normal  0.420893  normal 
 
 
-
 
NC_008726  Mvan_2008  short-chain dehydrogenase/reductase SDR  31.1 
 
 
261 aa  102  9e-21  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.959898  normal  0.356317 
 
 
-
 
NC_009338  Mflv_2405  3-alpha-hydroxysteroid dehydrogenase  35.29 
 
 
271 aa  96.7  3e-19  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_4796  3-alpha-hydroxysteroid dehydrogenase  31.85 
 
 
261 aa  94.4  2e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.616684  normal  0.0456615 
 
 
-
 
NC_011368  Rleg2_4885  3-alpha-hydroxysteroid dehydrogenase  31.45 
 
 
261 aa  93.6  3e-18  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.726379 
 
 
-
 
NC_009654  Mmwyl1_0504  3-alpha-hydroxysteroid dehydrogenase  28.68 
 
 
255 aa  93.6  4e-18  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_0129  3-alpha-hydroxysteroid dehydrogenase  30.68 
 
 
255 aa  91.3  1e-17  Polaromonas sp. JS666  Bacteria  normal  normal  0.735405 
 
 
-
 
NC_009656  PSPA7_2450  3-alpha-hydroxysteroid dehydrogenase  29.8 
 
 
257 aa  89  8e-17  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0588797  n/a   
 
 
-
 
NC_009338  Mflv_4338  short-chain dehydrogenase/reductase SDR  30.37 
 
 
293 aa  86.7  4e-16  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.305242  normal 
 
 
-
 
NC_010513  Xfasm12_1462  3-alpha-hydroxysteroid dehydrogenase  30.47 
 
 
255 aa  85.9  6e-16  Xylella fastidiosa M12  Bacteria  normal  0.759595  n/a   
 
 
-
 
NC_007005  Psyr_2733  3-alpha-hydroxysteroid dehydrogenase  26.77 
 
 
255 aa  85.9  7e-16  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.694898  normal  0.496395 
 
 
-
 
NC_008726  Mvan_4241  3-alpha-hydroxysteroid dehydrogenase  33.49 
 
 
251 aa  85.1  0.000000000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS05193  3-alpha-hydroxysteroid dehydrogenase  28.96 
 
 
255 aa  83.2  0.000000000000004  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.00510841  normal  0.489476 
 
 
-
 
NC_004578  PSPTO_2949  oxidoreductase, short-chain dehydrogenase/reductase family  27.89 
 
 
255 aa  81.3  0.00000000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.084933  n/a   
 
 
-
 
NC_010577  XfasM23_1390  3-alpha-hydroxysteroid dehydrogenase  29.3 
 
 
255 aa  79.3  0.00000000000006  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
CP001800  Ssol_2377  short-chain dehydrogenase/reductase SDR  27.52 
 
 
252 aa  75.1  0.000000000001  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_009077  Mjls_2043  short chain dehydrogenase  30.88 
 
 
257 aa  73.9  0.000000000002  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_2060  short chain dehydrogenase  30.88 
 
 
257 aa  73.9  0.000000000002  Mycobacterium sp. MCS  Bacteria  normal  0.256692  n/a   
 
 
-
 
NC_008705  Mkms_2106  short chain dehydrogenase  30.88 
 
 
257 aa  73.9  0.000000000002  Mycobacterium sp. KMS  Bacteria  normal  normal  0.077628 
 
 
-
 
NC_008391  Bamb_4196  short chain dehydrogenase  31.52 
 
 
252 aa  73.6  0.000000000004  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1849  short chain dehydrogenase  31.15 
 
 
255 aa  73.2  0.000000000005  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.838313 
 
 
-
 
NC_013730  Slin_6198  short-chain dehydrogenase/reductase SDR  29.09 
 
 
260 aa  72.4  0.000000000008  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_2929  short-chain dehydrogenase/reductase SDR  29.92 
 
 
249 aa  70.9  0.00000000002  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_1137  short-chain dehydrogenase/reductase SDR  28.9 
 
 
255 aa  71.2  0.00000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.420878 
 
 
-
 
NC_007355  Mbar_A0777  2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase  28.26 
 
 
256 aa  70.5  0.00000000003  Methanosarcina barkeri str. Fusaro  Archaea  normal  unclonable  0.000000000602932 
 
 
-
 
NC_010552  BamMC406_4719  short chain dehydrogenase  31.52 
 
 
252 aa  70.5  0.00000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.358577 
 
 
-
 
NC_009952  Dshi_0620  3-oxoacyl-[acyl-carrier-protein] reductase  28.12 
 
 
250 aa  69.3  0.00000000007  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.890979 
 
 
-
 
NC_008254  Meso_3619  short-chain dehydrogenase/reductase SDR  23.08 
 
 
247 aa  68.6  0.0000000001  Chelativorans sp. BNC1  Bacteria  decreased coverage  0.00790972  n/a   
 
 
-
 
NC_003910  CPS_0943  D-beta-hydroxybutyrate dehydrogenase  25.53 
 
 
270 aa  67.8  0.0000000002  Colwellia psychrerythraea 34H  Bacteria  normal  0.801002  n/a   
 
 
-
 
NC_011892  Mnod_8330  short-chain dehydrogenase/reductase SDR  29.59 
 
 
255 aa  67.8  0.0000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010531  Pnec_0235  short-chain dehydrogenase/reductase SDR  26.79 
 
 
244 aa  67.4  0.0000000002  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_1669  short-chain dehydrogenase/reductase SDR  32.38 
 
 
242 aa  67.4  0.0000000002  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_2647  3-ketoacyl-(acyl-carrier-protein) reductase  28.31 
 
 
252 aa  67.8  0.0000000002  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000389723  n/a   
 
 
-
 
NC_009901  Spea_2114  3 alpha-hydroxysteroid dehydrogenase/carbonyl reductase  29.08 
 
 
259 aa  67  0.0000000003  Shewanella pealeana ATCC 700345  Bacteria  normal  0.138604  n/a   
 
 
-
 
NC_010625  Bphy_6823  short-chain dehydrogenase/reductase SDR  28.03 
 
 
258 aa  67  0.0000000003  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1300  short-chain dehydrogenase/reductase SDR  31.4 
 
 
262 aa  66.6  0.0000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0738  short-chain dehydrogenase/reductase SDR  26.95 
 
 
280 aa  66.2  0.0000000005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_2515  short-chain dehydrogenase/reductase SDR  29.92 
 
 
250 aa  66.2  0.0000000006  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_0240  3-hydroxybutyrate dehydrogenase  26.57 
 
 
261 aa  66.2  0.0000000006  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.67492  n/a   
 
 
-
 
NC_011892  Mnod_8333  short-chain dehydrogenase/reductase SDR  28.37 
 
 
257 aa  66.2  0.0000000006  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.319832  n/a   
 
 
-
 
NC_008699  Noca_4297  short-chain dehydrogenase/reductase SDR  30.5 
 
 
246 aa  65.9  0.0000000007  Nocardioides sp. JS614  Bacteria  normal  0.408574  n/a   
 
 
-
 
NC_008726  Mvan_2281  short chain dehydrogenase  27.72 
 
 
257 aa  65.9  0.0000000007  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.121478 
 
 
-
 
NC_010623  Bphy_4924  short-chain dehydrogenase/reductase SDR  28.84 
 
 
267 aa  65.9  0.0000000008  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B1783  glucose 1-dehydrogenase  26.85 
 
 
247 aa  65.9  0.0000000008  Bacillus cereus G9842  Bacteria  normal  0.88349  normal 
 
 
-
 
NC_006686  CND02280  oxidoreductase, putative  27.72 
 
 
309 aa  65.1  0.000000001  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.878194  n/a   
 
 
-
 
NC_013743  Htur_2798  short-chain dehydrogenase/reductase SDR  29.89 
 
 
256 aa  65.5  0.000000001  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A3466  glucose 1-dehydrogenase  26.85 
 
 
247 aa  64.7  0.000000001  Bacillus cereus B4264  Bacteria  normal  0.0764776  n/a   
 
 
-
 
NC_012029  Hlac_1022  short-chain dehydrogenase/reductase SDR  28.93 
 
 
257 aa  65.1  0.000000001  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.522598  normal 
 
 
-
 
NC_007948  Bpro_0097  short-chain dehydrogenase/reductase SDR  29.96 
 
 
262 aa  65.1  0.000000001  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3742  short-chain dehydrogenase/reductase SDR  30.04 
 
 
260 aa  65.1  0.000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.071685 
 
 
-
 
NC_011894  Mnod_3075  short-chain dehydrogenase/reductase SDR  27.27 
 
 
261 aa  64.7  0.000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010180  BcerKBAB4_5564  short-chain dehydrogenase/reductase SDR  25.76 
 
 
248 aa  64.7  0.000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0423365  hitchhiker  0.00643231 
 
 
-
 
NC_011757  Mchl_1552  short-chain dehydrogenase/reductase SDR  24.72 
 
 
248 aa  63.9  0.000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0714452  normal 
 
 
-
 
NC_007948  Bpro_3342  short-chain dehydrogenase/reductase SDR  30.53 
 
 
239 aa  64.3  0.000000002  Polaromonas sp. JS666  Bacteria  normal  0.472803  normal 
 
 
-
 
NC_009719  Plav_0548  short-chain dehydrogenase/reductase SDR  28.35 
 
 
261 aa  64.3  0.000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6917  short-chain dehydrogenase/reductase SDR  28.63 
 
 
251 aa  64.7  0.000000002  Frankia sp. EAN1pec  Bacteria  normal  normal  0.780011 
 
 
-
 
NC_008148  Rxyl_3046  short-chain dehydrogenase/reductase SDR  28.21 
 
 
252 aa  64.3  0.000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_5080  short-chain dehydrogenase/reductase SDR  29.38 
 
 
252 aa  64.3  0.000000002  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4056  short chain dehydrogenase  28.57 
 
 
257 aa  64.3  0.000000002  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2736  short-chain dehydrogenase/reductase SDR  28.88 
 
 
255 aa  63.5  0.000000003  Dickeya zeae Ech1591  Bacteria  normal  0.777047  n/a   
 
 
-
 
NC_010338  Caul_1958  short-chain dehydrogenase/reductase SDR  26.74 
 
 
251 aa  63.9  0.000000003  Caulobacter sp. K31  Bacteria  normal  normal  0.10898 
 
 
-
 
NC_013946  Mrub_1897  short-chain dehydrogenase/reductase SDR  28.63 
 
 
247 aa  63.9  0.000000003  Meiothermus ruber DSM 1279  Bacteria  normal  hitchhiker  0.00100219 
 
 
-
 
NC_013730  Slin_2192  short-chain dehydrogenase/reductase SDR  25.97 
 
 
256 aa  63.9  0.000000003  Spirosoma linguale DSM 74  Bacteria  normal  hitchhiker  0.0046226 
 
 
-
 
NC_007958  RPD_4158  short-chain dehydrogenase/reductase SDR  29.5 
 
 
262 aa  63.5  0.000000004  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.526951  normal 
 
 
-
 
NC_007492  Pfl01_2753  Short-chain dehydrogenase/reductase SDR  27.24 
 
 
260 aa  63.2  0.000000005  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.53957  normal 
 
 
-
 
NC_009636  Smed_3492  short chain dehydrogenase  30.19 
 
 
256 aa  63.2  0.000000005  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2718  3-hydroxybutyrate dehydrogenase  28.52 
 
 
256 aa  63.2  0.000000005  Pseudomonas putida W619  Bacteria  normal  0.650562  normal  0.158048 
 
 
-
 
NC_009565  TBFG_12873  short chain dehydrogenase  27.03 
 
 
258 aa  63.2  0.000000005  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_1844  short-chain dehydrogenase/reductase SDR  28.74 
 
 
255 aa  62.8  0.000000006  Pseudomonas putida F1  Bacteria  normal  hitchhiker  0.0017919 
 
 
-
 
NC_010676  Bphyt_6696  short-chain dehydrogenase/reductase SDR  28.79 
 
 
249 aa  62.8  0.000000006  Burkholderia phytofirmans PsJN  Bacteria  normal  0.13982  normal 
 
 
-
 
NC_011831  Cagg_2751  short-chain dehydrogenase/reductase SDR  28.31 
 
 
252 aa  62.8  0.000000006  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal 
 
 
-
 
NC_010002  Daci_5646  short-chain dehydrogenase/reductase SDR  28.3 
 
 
256 aa  62.8  0.000000006  Delftia acidovorans SPH-1  Bacteria  normal  decreased coverage  0.000512545 
 
 
-
 
NC_013093  Amir_0418  short-chain dehydrogenase/reductase SDR  30.15 
 
 
245 aa  62.4  0.000000007  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00843006  n/a   
 
 
-
 
NC_007794  Saro_2963  short-chain dehydrogenase/reductase SDR  30.35 
 
 
250 aa  62.8  0.000000007  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.991261  n/a   
 
 
-
 
NC_011368  Rleg2_4774  short-chain dehydrogenase/reductase SDR  27.88 
 
 
253 aa  62.4  0.000000007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007412  Ava_C0109  short chain dehydrogenase  28.41 
 
 
251 aa  62.4  0.000000008  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008527  LACR_0845  3-ketoacyl-(acyl-carrier-protein) reductase  25.95 
 
 
243 aa  62.4  0.000000008  Lactococcus lactis subsp. cremoris SK11  Bacteria  hitchhiker  0.00584658  n/a   
 
 
-
 
NC_012850  Rleg_3437  short-chain dehydrogenase/reductase SDR  28.67 
 
 
261 aa  62.4  0.000000009  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.237096  normal 
 
 
-
 
NC_007511  Bcep18194_B2225  Short-chain dehydrogenase/reductase SDR  29.18 
 
 
267 aa  62  0.000000009  Burkholderia sp. 383  Bacteria  normal  normal  0.801106 
 
 
-
 
NC_002947  PP_1946  short chain dehydrogenase/reductase family oxidoreductase  26.89 
 
 
262 aa  62  0.00000001  Pseudomonas putida KT2440  Bacteria  normal  unclonable  0.000000538802 
 
 
-
 
NC_013595  Sros_7515  short-chain dehydrogenase/reductase SDR  28.68 
 
 
246 aa  61.6  0.00000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2474  short-chain dehydrogenase/reductase SDR  27.78 
 
 
263 aa  61.6  0.00000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.170949  n/a   
 
 
-
 
NC_008228  Patl_2140  short-chain dehydrogenase/reductase SDR  26.47 
 
 
254 aa  62  0.00000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1619  short-chain dehydrogenase/reductase SDR  29.59 
 
 
253 aa  61.6  0.00000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.901509  normal  0.0346671 
 
 
-
 
NC_008322  Shewmr7_0657  short-chain dehydrogenase/reductase SDR  26.2 
 
 
292 aa  61.6  0.00000001  Shewanella sp. MR-7  Bacteria  normal  normal  0.65557 
 
 
-
 
NC_009664  Krad_1454  short-chain dehydrogenase/reductase SDR  27.94 
 
 
256 aa  61.6  0.00000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.108685 
 
 
-
 
NC_012792  Vapar_5441  short-chain dehydrogenase/reductase SDR  31.32 
 
 
249 aa  62  0.00000001  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_3847  short-chain dehydrogenase/reductase SDR  25 
 
 
247 aa  62  0.00000001  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_1558  short-chain dehydrogenase/reductase SDR  29.12 
 
 
273 aa  62  0.00000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.935721  normal 
 
 
-
 
NC_008726  Mvan_1212  short-chain dehydrogenase/reductase SDR  29.62 
 
 
238 aa  62  0.00000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.305044  normal  0.539797 
 
 
-
 
NC_009338  Mflv_4062  short chain dehydrogenase  26.09 
 
 
257 aa  62  0.00000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.171649  normal  0.787909 
 
 
-
 
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