| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5441 |
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| Symbol | |
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| ID | 7975135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 143840 |
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| End bp | 144589 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796029 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002947303 |
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| Protein GI | 239820118 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAGC TCTCTGGCAA AGTGGCGGTG ATCACCGGAG GCAACAGCGG CATCGGCCTG
GCGTGCGCCC AGGCTTTCGC GGCGGAAGGC GCCCGCGTCG TCGTCGTAGG ACGCCGCCAG
GACGCCGTGG ACACGGCATT GGCGCGCATC GGTCCGGACG CGATGGGCTT CGTCGGCGAC
GTGGCCGACC TTGCAATGCA CGACCGCCTG CTCGCCGCGG TGAAGGCACG GTTCGGCGCC
ATCGACATCT ATGTGGCGAA TGCGGGAACG GCGATTCTCG AGCCGTCCTC TGCCGTGACC
GTGGACAACT ACGACGCGCA GTTCGCCACC AATACACGCG CGGTGTTCTT CGGCGTGACC
AAGGCACTGC CGTTCATGCG CGACGGCGGC TCGATCATCC TCACGAGCTC GATCGCCGGC
AGCAAGGTGA TGGACAACCA CGCGGTCTAC GCCGGCAGCA AGGCCGCCAT CGAGGCCTTT
GCACGCAACT GGGCACTCGA GCTCAAGGAC CGGCGCATCC GGGTCAACGT GCTGAGCCCC
GGCCCGGTCG ACACGCCGAT CCTCGCAAAG CTGGGCATCA CGGAATCCGC ACGGCCTGAT
TTCGACCAGC GCATGGCGGC AGCGATCCCG CTGGGTCGCC TGGGCCAGCC GAATGACCTG
GCGCAAGCGG CGCTGTTCCT GGCGAGCGAC GACAGCGTGT TCGTCACGGG CGTCAACCTG
AAGGTCGACG GTGGCATGGC GCTGGCCTGA
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| Protein sequence | MQKLSGKVAV ITGGNSGIGL ACAQAFAAEG ARVVVVGRRQ DAVDTALARI GPDAMGFVGD
VADLAMHDRL LAAVKARFGA IDIYVANAGT AILEPSSAVT VDNYDAQFAT NTRAVFFGVT
KALPFMRDGG SIILTSSIAG SKVMDNHAVY AGSKAAIEAF ARNWALELKD RRIRVNVLSP
GPVDTPILAK LGITESARPD FDQRMAAAIP LGRLGQPNDL AQAALFLASD DSVFVTGVNL
KVDGGMALA
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