| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5646 |
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| Symbol | |
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| ID | 5751266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6278798 |
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| End bp | 6279568 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641300779 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001566660 |
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| Protein GI | 160901078 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.000512545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACCACCA TTTCCGAATC ACGTGTCGCG CTCGTCACCG GCGGCGCCAA GGGCATCGGC
GCAGAGGTGT GCGCCCGTCT GGCGGTCCTC GGCCACCATG TCCTCGTGGC CGACCTCGAT
GTCGATGCGG CGACGGCGAC GGCACTCGAG CTCAGTGCTG CCGGCGGCCG GGCCACCGCG
CTGCGGCTGG ACGTCGGCAA GCCCGAGGCT ATTGCCACGG CGTTCGAGCA GGTCGAGCGC
GAGCACGGGC GCTGCGACAT ACTTGTCAAC TCTGCCGGCA TTGCGAAGGT CTTCCCCTTC
ATCGACTTCC CGCTCGACAA CTTCGTCGCG ACGATGAACG TCAACGTCAC CGGCACGCTG
CTGTGCGCGC AAGCGGCGGC TCGGCTGATG GTGAAGCAGG GCTGGGGCCG CATCGTCAAC
ATCGCGTCTG TCGCCGGCAT GCGCGCAGTG GGGAGCGGCC GCACCGCCTA CGGCACGTCC
AAAGGGGCGG TGATTGCGCT GACGCGGCAG ATGGCCGTGG AACTGGCCGA GCACGGGATT
ACCGCCAACG CGGTGGCTCC AGGCCCCGTC GATACGCCGA TGACGCAGGC GCTGCACACC
GCGCAGTTCC GCGCCGAATA TTCGAAGGCC ATTCCGATGA ATCGCTACGG CACCTGTGGG
GAGATCGCCT CGGCCGTGAC CTACTTGGTA TCCGAAGACG CTCGGTACGT AACCGGCATC
GCGATGCCCG TCGATGGCGG CTTTCTCGCG TCAGGCGCAC GCGGCATATA A
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| Protein sequence | MTTISESRVA LVTGGAKGIG AEVCARLAVL GHHVLVADLD VDAATATALE LSAAGGRATA
LRLDVGKPEA IATAFEQVER EHGRCDILVN SAGIAKVFPF IDFPLDNFVA TMNVNVTGTL
LCAQAAARLM VKQGWGRIVN IASVAGMRAV GSGRTAYGTS KGAVIALTRQ MAVELAEHGI
TANAVAPGPV DTPMTQALHT AQFRAEYSKA IPMNRYGTCG EIASAVTYLV SEDARYVTGI
AMPVDGGFLA SGARGI
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