| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4719 |
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| Symbol | |
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| ID | 6180522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1838225 |
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| End bp | 1838983 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684478 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001811389 |
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| Protein GI | 172063738 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.358577 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGC GATTCGATTT CAGCGGTTCA AGGGTGCTCG TCACCGGCGC GTCGAGCGGG
ATCGGGCGTG CATGCGCGGT TGCGCTGGCG CATGCGGGCG CACGGGTCGT CGCGGCGGGG
CGCGATGCGG CCGCGCTCGA CGTGCTGGCC GGCGAAATTG CCTGCGAGAC CTTGCGCGTC
GATATCGGCG GCGATGAACA GGCGATCGAT GCGGCGCTTG CCGCGTACGA CGCGTTCGAT
GCGCTCGTCA ATTGCGCGGG CATCGCGTCG CTCGAGCCGG CGCTCGAGGT CAGCGCCGAT
CATTTCGATC GCGTGATGGC CGTCAATGCG CGGGGCGCTG CGCTCGTCGC ACGGGCCGTC
GCGCGGAAGA TGATCGCCCG CGACGGGCGT GGCGCCGTGC GTGCGCGGGG CAGCATCGTC
AACGTATCGA GCCAGGCCGC GCTGGTCGGC TTGCCCGAGC ATCTGAGCTA TTGCGCGTCG
AAGGCGGCGC TCGACGCGAT TACGCGTGTG CTGTGCATCG AACTTGGCGC GCACGGGATT
CGTGTGAACA GCGTGAACCC GACCGTCACG CTCACGCCGA TGGCGCAATT CGCGTGGAGC
GAACCGGAAA AGCGCGCGCC GATGCTCGCG GCGATTCCGC TCGGGCGCTT CGCGGAGCCG
GACGAGGTGG TCGAGCCGAT CCTGTTCCTG CTGAGCGATG CGGCGTCGAT GATCAGCGGG
GCGTCGCTGG CGATCGATGG CGGGTATACG GCGCGGTAG
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| Protein sequence | MKTRFDFSGS RVLVTGASSG IGRACAVALA HAGARVVAAG RDAAALDVLA GEIACETLRV
DIGGDEQAID AALAAYDAFD ALVNCAGIAS LEPALEVSAD HFDRVMAVNA RGAALVARAV
ARKMIARDGR GAVRARGSIV NVSSQAALVG LPEHLSYCAS KAALDAITRV LCIELGAHGI
RVNSVNPTVT LTPMAQFAWS EPEKRAPMLA AIPLGRFAEP DEVVEPILFL LSDAASMISG
ASLAIDGGYT AR
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