| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1558 |
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| Symbol | |
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| ID | 8543940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 2126050 |
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| End bp | 2126871 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646386267 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003266002 |
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| Protein GI | 262194793 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.935721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGATT CCAAGCAAAG CGGCAGAAAT CTCGCCGAGA TCATGTCCCC CCAGGTGCTC
GCCTGGCGCG AGTCCATCAC CCCCGAACGC TTCGCCGGCA AAACCGTCAT CGTCACCGGT
GCCGCCTCGG GCATCGGCCG GGCCACGGCC TCGCGCGTGG CTCGCGAAGG CGGCCGCGTC
ATCGCCGTCG ACCTGGTCAC CGAGGGCATA GAGTCGCTCG CCTCCGAGCT CGGCGAGGCC
GCGATCACGA CCGTCCGCGC CGACCTGTCC AAGCCCGGCG ACATCGACGC CATCGTCGAG
GCGGCCGGCG ACAGCATCGA CGGTCTGGCC AACGTCGCCG GCATCATGGA CCGCTTCCAG
CCCCTGCACG AGGTCGGCGA CGAGCTCTGG GACCAGGTCT TCGCCGTCAA CCTCACCGGC
CTGATGCGGC TGTCGCGCGC CGTGCTGCCG AGCATGCTGG CCGCCCAGCG CGGCTCCATC
GTCAACATCA GCTCCGAGGC CGGCCTGCGC GGCGGCGCCG CCGGAGCCGC CTACACCGCC
TCGAAACACG CCGTCGTCGG CCTCACCAAG TCGTGCGCCT TCATGTACTG GCCCAAGGGC
GTGCGCGTCA ACGCGGTCGC GCCCGGGCCC ACGCTCACCG GCATGCAGGC GAACTTCGAA
TCCGACATGG GCCGCGAGCG TCTCGCCAGC GCCATGGGCG CCATCCCCAA GCTGGCCACG
GCCGAGGCCC TGGCCGCCTC GATCTCGTTC CTGCTGTCCG ACGACGCCGT CAACATCAGC
GGCGCCATCC TGCCCTCGGA CGGCGGCTGG AACGCCCTGT AG
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| Protein sequence | MSDSKQSGRN LAEIMSPQVL AWRESITPER FAGKTVIVTG AASGIGRATA SRVAREGGRV
IAVDLVTEGI ESLASELGEA AITTVRADLS KPGDIDAIVE AAGDSIDGLA NVAGIMDRFQ
PLHEVGDELW DQVFAVNLTG LMRLSRAVLP SMLAAQRGSI VNISSEAGLR GGAAGAAYTA
SKHAVVGLTK SCAFMYWPKG VRVNAVAPGP TLTGMQANFE SDMGRERLAS AMGAIPKLAT
AEALAASISF LLSDDAVNIS GAILPSDGGW NAL
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