| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4196 |
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| Symbol | |
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| ID | 4313091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1114536 |
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| End bp | 1115294 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638152037 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_776083 |
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| Protein GI | 115358945 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGC GATTCGATTT CAGCGGTTCA CGGGTGCTCG TCACCGGCGC GTCGAGCGGG
ATCGGGCGCG CATGCGCGGT TGCGCTGGCG CATGCGGGCG CACGGGTCGT CGCGGCGGGG
CGCGATGCGG CCGCGCTTGA CGTGCTGGCC GGCGAAATCG CCTGCGATAT CTTGCGCGTC
GATATCGGCG CCGATGAACA GGCGATCGAT GCGGCGCTTG CCGCGTACGA CGCGTTCGAT
GCGCTCGTCA ATTGCGCGGG CATCGCGTCG CTCGAGCCGG CGCTCGAGGT CAGCGCCGAG
CACTTCGATC GCGTGATGGC CGTCAATGCG CGTGGCGCTG CGCTCGTCGC ACGGGCCGTC
GCGCGGAAGA TGATCGCGCG CGACGGGCGG GGCGCCGTGC GTGCGCGTGG CAGCATCGTC
AACGTATCGA GCCAGGCGGC GCTCGTCGGC TTGCCGGAGC ATCTGAGCTA TTGCGCGTCG
AAGGCGGCGC TCGACGCGAT TACGCGCGTG CTGTGCATCG AACTTGGCGC GCACGGGATT
CGTGTGAACA GCGTGAACCC GACCGTCACG CTCACGCCGA TGGCGCAATT CGCGTGGAGC
GACCCGGAAA CGCGCGCGCC GATGCTCGCG GCGATTCCGC TCGGGCGCTT CGCGGAGCCG
GACGAGGTGG TCGAGCCGAT CCTGTTCCTG CTGAGCGACG CGGCGTCGAT GATCAGCGGG
GTGTCGCTGG CGATCGATGG CGGGTATACG GCGCGGTAG
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| Protein sequence | MKTRFDFSGS RVLVTGASSG IGRACAVALA HAGARVVAAG RDAAALDVLA GEIACDILRV
DIGADEQAID AALAAYDAFD ALVNCAGIAS LEPALEVSAE HFDRVMAVNA RGAALVARAV
ARKMIARDGR GAVRARGSIV NVSSQAALVG LPEHLSYCAS KAALDAITRV LCIELGAHGI
RVNSVNPTVT LTPMAQFAWS DPETRAPMLA AIPLGRFAEP DEVVEPILFL LSDAASMISG
VSLAIDGGYT AR
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