Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6917 |
Symbol | |
ID | 5675230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 8425638 |
End bp | 8426393 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641245766 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001511157 |
Protein GI | 158318649 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.780011 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGAAC GGAAGACGGC CGTAGTCACC GGCGGCGGGT CGGGCATCGG GCGGGCGATC AGCCTGCGAC TGGCCAAGGA CGGCTTCGCC ACCGCCGTGC TCGACATCAA CACCGAAAGC GCCGAGCAGG TAGCCAAGGA AGCCCGCGAG CTAGGGTACG AGGCCGCCGC GTTCGGCGGT GTCGACGTCT CCGACCGTGC GCAGGTGGAC GCGGCGATCG ACCGCATCCG CGCCACGTTC GGCCCCGTCC TCGTGCTCGT GAACAACGCC GGTCTCACCG GCACCCTGGG TTTCCAGAAG ATCACGGACG AGCTCTGGGA CCGGATGATC GCCGTCAATC TCAGCGGCCC GTTCTACCTG ACCCAGGCCG TCCTCCCGGA CATGATCGAC GCTCACTGGG GCCGGATCGT CAACATCTCG TCGTCGAGCG CGCACTCCGG CCAGCAGTAC ATGGTCCACT ACGTGTCGAC GAAGGCCGGC CTCATCGGCT TCACCAAGTC GCTGGCCCTG GAGTACGGCC CCAAGGGCAT CACGGTCAAC ACGATCCCGC CGGGATTCGT CGACACCCCG ATGCTGCGCG ACGTCGAGGC GAAGGGCTTC ATCGGCGGCT CGATCGCCGA CCACGCCGAG CGCACCCCGG TGCGGCGCGC CGGCAAGCCC GAGGACATCG CCGCGGCCGC CTCCTTCCTC ATCTCCGAGG AGGCCGGGTA CATCACCGGT CAGATCATCG GTGTCAACGG TGGACGCAAC ACCTGA
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Protein sequence | MTERKTAVVT GGGSGIGRAI SLRLAKDGFA TAVLDINTES AEQVAKEARE LGYEAAAFGG VDVSDRAQVD AAIDRIRATF GPVLVLVNNA GLTGTLGFQK ITDELWDRMI AVNLSGPFYL TQAVLPDMID AHWGRIVNIS SSSAHSGQQY MVHYVSTKAG LIGFTKSLAL EYGPKGITVN TIPPGFVDTP MLRDVEAKGF IGGSIADHAE RTPVRRAGKP EDIAAAASFL ISEEAGYITG QIIGVNGGRN T
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