Gene Bphy_4924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_4924 
Symbol 
ID6246429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2007739 
End bp2008542 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content58% 
IMG OID642596661 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001861068 
Protein GI186473726 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCAA CACCCGTTGT CAATCAGAAC TCGAAACGCC CATCTCAAAC TGCTGGCCGG 
GTTGCTGTCG TTACAGGCGC CGCTGGCGGG ATCGGGGCCG CGATAGTCCG TCGCCTTGCG
GATGATGGGT TCACCGTCAT TGTTGCCGAT CTGAATCTCG CGGCTGCCGA AGAAACTGCC
CACCAGATGA GTGCTCGGGG ACTGTCAGCC ATTCCGATGC AACTCGACGT GGGTAAGTCG
GAATCGATTG ACGAGTTTTT CGCTCTGGTC GGCAATCAGT TCGAGCGTTG CGACGTTCTT
GTGAACAACG CAGGCATAGC GAAGACGTTT CCGTTCGAGG AGGTGCCGCT TGATCACTGG
CGAAGCCTCA TGGAGATCAA CCTGACCGGA CCACTCCTCC TCACCCAGCA GGCAGTTCGA
TTCATGGTCA AACGCAAGTG GGGGCGAGTG ATCAACATTG CTTCCGTTGC TGGAATTCGC
GCTAGTGTAG GCAGGACGGG GTACGGCACT TCGAAGGCCG CCGTCATGGG ACTAACACGA
CAAGTCGCAG TGGAATACGC AGAGCATGGA ATCACGGCTA ACGCAGTGGC ACCGGGGCCG
ATCGAAACAC CCATGGCAAC GGCTTTGCAT TCGGCCGCCC AACGCGACGC ATTCATGCGA
CACGTTCCGA TGCGCCGCTA CGGCACACCT GATGAAGTCG CGGGTGTCGT GTCTTTCCTT
GCTTCTGATA GCGCTTCGTA TGTGACAGGT CAGACGATCT CCGTTGACGG TGGATTCGTT
GCTGCCGGCC TGATTGACGC TTAA
 
Protein sequence
MSATPVVNQN SKRPSQTAGR VAVVTGAAGG IGAAIVRRLA DDGFTVIVAD LNLAAAEETA 
HQMSARGLSA IPMQLDVGKS ESIDEFFALV GNQFERCDVL VNNAGIAKTF PFEEVPLDHW
RSLMEINLTG PLLLTQQAVR FMVKRKWGRV INIASVAGIR ASVGRTGYGT SKAAVMGLTR
QVAVEYAEHG ITANAVAPGP IETPMATALH SAAQRDAFMR HVPMRRYGTP DEVAGVVSFL
ASDSASYVTG QTISVDGGFV AAGLIDA