Gene Pfl01_2753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2753 
Symbol 
ID3714494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3174852 
End bp3175634 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content57% 
IMG OID 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_348484 
Protein GI77458978 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.53957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAG ATTTCATTCA GAATTTTTCG CTTGCCGGCC GAACTGTATT GATCACCGGC 
GCCTCCAGCG GCATTGGAGC TCACCTGGCA AGGGTCGCTG GGCATGCCGG CGCCCGGGTT
GTGCTGACTG CACGACGCGT CGAAAGACTC GCACAGGTGG CAAAGGACAT TGAATGGGAT
TGCGGGCAAG CGCTGTCCGT CGAACTCGAT GTGACTGACC GGAACAGTGT CGAAGCGGCG
TTCGATGCGG CCGAAGCACA TTTTGGCGTG GTTGACGTGG TACTCAACAA CGCAGGTATC
GGTAACGGCC AGCGTCCACT CGAAATCAGT GAAGAGCAGT GGCGTGAGAT GCTTTCAACC
AATCTGGATG GCGTCTGGCG TGTCGCCCAG GTTGCTGCAC AAAGGCTGGC AAAGGCCGGA
CGTAAGGGCA GCATCGTCAA CGTGGCCTCG ATACTCGGAC TGCGCGTTAG CACCGGTTAC
AGCCATTACT GCGCTGCAAA AGCCGGGGTG GTTCAGCTGA CCAAGTCACT GGCGCTGGAG
CTGGCGCGGT ACAACATCAG GGTCAACGCC ATCGCGCCAG GTTATTTCAA GACTGAAATG
AACGAAGCTT TTTTTGAGGG TGACAAGGGC AACAGCTACA TCCGCGATAG GGTGCCCATG
CGTCGACTGG GTCAGTTACA CGAACTGGCC GGTCCCTTTT TGCTGTTAGC GAGTGACGCC
GGTGCATTCA TGACTGGCAG CGTACTGACC GTGGATGGAG GCCATCTGGT CAGCAGCATG
TGA
 
Protein sequence
MTQDFIQNFS LAGRTVLITG ASSGIGAHLA RVAGHAGARV VLTARRVERL AQVAKDIEWD 
CGQALSVELD VTDRNSVEAA FDAAEAHFGV VDVVLNNAGI GNGQRPLEIS EEQWREMLST
NLDGVWRVAQ VAAQRLAKAG RKGSIVNVAS ILGLRVSTGY SHYCAAKAGV VQLTKSLALE
LARYNIRVNA IAPGYFKTEM NEAFFEGDKG NSYIRDRVPM RRLGQLHELA GPFLLLASDA
GAFMTGSVLT VDGGHLVSSM