More than 300 homologs were found in PanDaTox collection
for query gene Dole_1358 on replicon NC_009943
Organism: Desulfococcus oleovorans Hxd3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009943  Dole_1358  response regulator receiver protein  100 
 
 
144 aa  291  2e-78  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_011769  DvMF_2334  response regulator receiver protein  51.3 
 
 
151 aa  130  6.999999999999999e-30  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_2827  response regulator receiver protein  49.12 
 
 
137 aa  117  6e-26  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  46.32 
 
 
135 aa  115  1.9999999999999998e-25  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  46.61 
 
 
144 aa  112  1.0000000000000001e-24  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  47.11 
 
 
139 aa  110  5e-24  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  43.59 
 
 
121 aa  109  1.0000000000000001e-23  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  40.48 
 
 
147 aa  109  1.0000000000000001e-23  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  44.17 
 
 
151 aa  108  2.0000000000000002e-23  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  47.06 
 
 
129 aa  105  3e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  41.01 
 
 
157 aa  104  4e-22  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  43.07 
 
 
147 aa  104  5e-22  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  42.74 
 
 
157 aa  103  1e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0695  response regulator receiver domain-containing protein  41.22 
 
 
141 aa  101  4e-21  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.396926  n/a   
 
 
-
 
NC_009943  Dole_1348  response regulator receiver protein  42.62 
 
 
173 aa  100  5e-21  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  40 
 
 
119 aa  100  6e-21  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  44.74 
 
 
131 aa  100  8e-21  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  45.3 
 
 
128 aa  99.4  1e-20  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_011769  DvMF_2346  response regulator receiver protein  44.8 
 
 
136 aa  99  2e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_1352  response regulator receiver protein  42.24 
 
 
139 aa  97.8  4e-20  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00001959  n/a   
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  40.34 
 
 
143 aa  96.7  9e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_008751  Dvul_2822  response regulator receiver protein  42.98 
 
 
135 aa  96.7  9e-20  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3572  two component, sigma-54 specific, Fis family transcriptional regulator  40.48 
 
 
457 aa  95.5  2e-19  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  42.11 
 
 
120 aa  94.4  5e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0324  response regulator receiver domain-containing protein  45.13 
 
 
127 aa  94  6e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.581793  n/a   
 
 
-
 
NC_009943  Dole_1360  response regulator receiver sensor signal transduction histidine kinase  43.75 
 
 
403 aa  94  6e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  42.98 
 
 
153 aa  94  6e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011662  Tmz1t_1843  two component, sigma54 specific, transcriptional regulator, Fis family  43.93 
 
 
465 aa  93.2  9e-19  Thauera sp. MZ1T  Bacteria  normal  0.798265  n/a   
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  40 
 
 
141 aa  92.8  1e-18  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_009943  Dole_1362  response regulator receiver protein  37.7 
 
 
159 aa  92.8  1e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0327  response regulator receiver domain-containing protein  38.13 
 
 
142 aa  92.8  1e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0821  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  36.51 
 
 
1139 aa  92.4  2e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.187038 
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  40 
 
 
122 aa  92  3e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2795  two component transcriptional regulator  39.67 
 
 
266 aa  90.9  6e-18  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  39.06 
 
 
374 aa  90.5  6e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_012918  GM21_3903  two component, sigma54 specific, transcriptional regulator, Fis family  37.69 
 
 
455 aa  89.7  1e-17  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000574971 
 
 
-
 
NC_009943  Dole_1341  response regulator receiver protein  38.21 
 
 
301 aa  89.7  1e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_1566  response regulator receiver protein  35.54 
 
 
126 aa  89.7  1e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1772  response regulator receiver protein  38.69 
 
 
151 aa  89.7  1e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_0404  response regulator receiver protein  39.42 
 
 
151 aa  89.7  1e-17  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.134088 
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  42.24 
 
 
147 aa  89  2e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2335  response regulator receiver protein  45.13 
 
 
411 aa  89  2e-17  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000388714  n/a   
 
 
-
 
NC_008554  Sfum_0620  response regulator receiver protein  37.5 
 
 
142 aa  88.6  3e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0657  response regulator receiver protein  45.69 
 
 
143 aa  88.6  3e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.771795  normal 
 
 
-
 
NC_007404  Tbd_0904  two component Fis family transcriptional regulator  38.52 
 
 
454 aa  87.8  5e-17  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.629928  normal 
 
 
-
 
NC_009523  RoseRS_1088  two component transcriptional regulator  38.84 
 
 
264 aa  87.4  6e-17  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.237646 
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  35.9 
 
 
494 aa  87.4  6e-17  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3819  two component, sigma54 specific, transcriptional regulator, Fis family  37.72 
 
 
455 aa  87.4  6e-17  Geobacter bemidjiensis Bem  Bacteria  normal  0.785821  n/a   
 
 
-
 
NC_009943  Dole_1347  response regulator receiver protein  36.72 
 
 
688 aa  87  9e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0656  response regulator receiver protein  39.06 
 
 
129 aa  86.3  1e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.663964  normal 
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  35.34 
 
 
142 aa  85.9  2e-16  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_008554  Sfum_3765  two component, sigma54 specific, Fis family transcriptional regulator  41.03 
 
 
463 aa  85.5  2e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.000821276  normal 
 
 
-
 
NC_009483  Gura_3744  putative GAF sensor protein  33.33 
 
 
323 aa  85.1  3e-16  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2269  response regulator receiver protein  37.5 
 
 
130 aa  85.1  3e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.740525  n/a   
 
 
-
 
NC_009483  Gura_4192  two component, sigma-54 specific, Fis family transcriptional regulator  37.72 
 
 
454 aa  85.1  3e-16  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00227342  n/a   
 
 
-
 
NC_008554  Sfum_0654  response regulator receiver protein  41.74 
 
 
413 aa  85.1  3e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.113697  normal 
 
 
-
 
NC_007498  Pcar_1994  two component signal transduction response regulator  41.51 
 
 
477 aa  84.7  4e-16  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2035  response regulator receiver protein  39.32 
 
 
129 aa  84.7  4e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0710  two component, sigma54 specific, Fis family transcriptional regulator  39.13 
 
 
456 aa  84.3  4e-16  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1364  two component, sigma54 specific, Fis family transcriptional regulator  35.04 
 
 
485 aa  84.3  4e-16  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B2721  sigma-54 dependent transcriptional regulator/response regulator  35.83 
 
 
445 aa  84.3  5e-16  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C2825  transcriptional regulator ZraR  35.83 
 
 
445 aa  84.3  5e-16  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.479389  normal 
 
 
-
 
NC_011094  SeSA_A2804  transcriptional regulatory protein ZraR  35.83 
 
 
445 aa  84.3  5e-16  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A2763  transcriptional regulator ZraR  35.83 
 
 
445 aa  84.3  5e-16  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A2938  transcriptional regulator ZraR  35.83 
 
 
445 aa  84.3  5e-16  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_2015  two component hybrid sensor response regulator  40.83 
 
 
391 aa  84.3  6e-16  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0636  response regulator receiver protein  38.58 
 
 
124 aa  84  6e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.621219  normal 
 
 
-
 
NC_008609  Ppro_2968  response regulator receiver sensor signal transduction histidine kinase  34.17 
 
 
392 aa  84  6e-16  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_0386  two component transcriptional regulator  38.76 
 
 
229 aa  83.6  8e-16  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2217  two component transcriptional regulator, winged helix family  36.67 
 
 
276 aa  83.6  8e-16  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00294817  normal 
 
 
-
 
CP001509  ECD_03881  fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein  33.33 
 
 
441 aa  83.6  9e-16  Escherichia coli BL21(DE3)  Bacteria  normal  0.0124745  n/a   
 
 
-
 
NC_010468  EcolC_4021  transcriptional regulatory protein ZraR  33.33 
 
 
441 aa  83.6  9e-16  Escherichia coli ATCC 8739  Bacteria  normal  0.0128092  normal  0.0227655 
 
 
-
 
NC_012892  B21_03834  hypothetical protein  33.33 
 
 
441 aa  83.6  9e-16  Escherichia coli BL21  Bacteria  normal  0.0118236  n/a   
 
 
-
 
NC_011146  Gbem_0010  multi-sensor signal transduction histidine kinase  40.17 
 
 
511 aa  83.6  9e-16  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5475  transcriptional regulatory protein ZraR  33.33 
 
 
441 aa  83.6  9e-16  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_0987  two component, sigma54 specific, transcriptional regulator, Fis family  32.17 
 
 
489 aa  83.2  0.000000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_0009  multi-sensor signal transduction histidine kinase  36.67 
 
 
508 aa  83.2  0.000000000000001  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1085  putative two component, sigma54 specific, transcriptional regulator, Fis family  35.94 
 
 
445 aa  83.2  0.000000000000001  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_4152  two component, sigma54 specific, Fis family transcriptional regulator  35.9 
 
 
480 aa  82.4  0.000000000000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.038607 
 
 
-
 
NC_011891  A2cp1_2056  two component, sigma54 specific, transcriptional regulator, Fis family  41.03 
 
 
473 aa  82  0.000000000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.732718  n/a   
 
 
-
 
NC_011769  DvMF_1993  two component, sigma54 specific, transcriptional regulator, Fis family  35.34 
 
 
486 aa  82  0.000000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_012918  GM21_0009  multi-sensor signal transduction histidine kinase  40.17 
 
 
509 aa  82.4  0.000000000000002  Geobacter sp. M21  Bacteria  n/a    normal  0.923259 
 
 
-
 
NC_013173  Dbac_2034  response regulator receiver protein  35.34 
 
 
300 aa  82  0.000000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_3039  two component, sigma54 specific, Fis family transcriptional regulator  36.44 
 
 
445 aa  82.4  0.000000000000002  Enterobacter sp. 638  Bacteria  normal  0.992832  normal  0.337936 
 
 
-
 
NC_011769  DvMF_1773  response regulator receiver sensor signal transduction histidine kinase  37.29 
 
 
408 aa  82  0.000000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011145  AnaeK_1971  two component, sigma54 specific, transcriptional regulator, Fis family  41.03 
 
 
473 aa  82  0.000000000000002  Anaeromyxobacter sp. K  Bacteria  normal  0.0887215  n/a   
 
 
-
 
NC_008554  Sfum_0633  response regulator receiver protein  33.05 
 
 
133 aa  82.4  0.000000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.546392  normal 
 
 
-
 
NC_009943  Dole_1649  two component, sigma54 specific, Fis family transcriptional regulator  31.85 
 
 
479 aa  82  0.000000000000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3049  putative two component, sigma54 specific, transcriptional regulator, Fis family  36.44 
 
 
445 aa  82  0.000000000000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3989  two component, sigma54 specific, transcriptional regulator, Fis family  32.5 
 
 
441 aa  81.6  0.000000000000003  Escherichia coli DH1  Bacteria  normal  0.716922  n/a   
 
 
-
 
NC_007760  Adeh_0417  two component, sigma54 specific, Fis family transcriptional regulator  36.75 
 
 
474 aa  81.6  0.000000000000003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.45134  n/a   
 
 
-
 
NC_011891  A2cp1_0446  two component, sigma54 specific, transcriptional regulator, Fis family  36.75 
 
 
481 aa  81.6  0.000000000000003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_4445  two component transcriptional regulator  40.44 
 
 
229 aa  81.6  0.000000000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.14031 
 
 
-
 
NC_009800  EcHS_A4238  transcriptional regulatory protein ZraR  32.5 
 
 
441 aa  81.6  0.000000000000003  Escherichia coli HS  Bacteria  normal  0.020936  n/a   
 
 
-
 
NC_010658  SbBS512_E4497  transcriptional regulatory protein ZraR  32.5 
 
 
441 aa  81.6  0.000000000000003  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.0000279415  n/a   
 
 
-
 
NC_009801  EcE24377A_4549  transcriptional regulatory protein ZraR  32.5 
 
 
441 aa  81.6  0.000000000000003  Escherichia coli E24377A  Bacteria  hitchhiker  0.000369022  n/a   
 
 
-
 
NC_010498  EcSMS35_4454  transcriptional regulatory protein ZraR  32.5 
 
 
441 aa  81.6  0.000000000000003  Escherichia coli SMS-3-5  Bacteria  normal  0.209341  hitchhiker  0.000519331 
 
 
-
 
NC_011145  AnaeK_0879  two component, sigma54 specific, transcriptional regulator, Fis family  34.38 
 
 
466 aa  81.3  0.000000000000004  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1842  response regulator receiver protein  36 
 
 
227 aa  81.6  0.000000000000004  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2255  two component transcriptional regulator, Fis family  37.21 
 
 
185 aa  81.6  0.000000000000004  Anaeromyxobacter sp. K  Bacteria  normal  0.0449716  n/a   
 
 
-
 
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