More than 300 homologs were found in PanDaTox collection
for query gene DET1524 on replicon NC_002936
Organism: Dehalococcoides ethenogenes 195



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002936  DET1524  DNA binding response regulator  100 
 
 
230 aa  462  1e-129  Dehalococcoides ethenogenes 195  Bacteria  normal  0.731193  n/a   
 
 
-
 
NC_013552  DhcVS_1380  DNA binding response regulator  88.7 
 
 
230 aa  424  1e-118  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4649  two component transcriptional regulator  32.89 
 
 
230 aa  142  4e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.424735  normal 
 
 
-
 
NC_007964  Nham_2990  two component transcriptional regulator  33.78 
 
 
230 aa  141  7e-33  Nitrobacter hamburgensis X14  Bacteria  normal  0.839569  n/a   
 
 
-
 
NC_007298  Daro_1079  two component transcriptional regulator  35.11 
 
 
230 aa  139  3e-32  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2051  two component transcriptional regulator, winged helix family  32.89 
 
 
247 aa  138  8.999999999999999e-32  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.520505  normal 
 
 
-
 
NC_010622  Bphy_2053  two component transcriptional regulator  35.4 
 
 
232 aa  137  2e-31  Burkholderia phymatum STM815  Bacteria  normal  normal  0.745879 
 
 
-
 
NC_013757  Gobs_4285  two component transcriptional regulator, winged helix family  33.33 
 
 
238 aa  134  8e-31  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.83647  n/a   
 
 
-
 
NC_014210  Ndas_0299  two component transcriptional regulator, winged helix family  32.02 
 
 
231 aa  134  8e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.867846 
 
 
-
 
NC_014158  Tpau_3248  two component transcriptional regulator, winged helix family  32.89 
 
 
224 aa  134  9.999999999999999e-31  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0720  two component transcriptional regulator, winged helix family  35.4 
 
 
224 aa  134  1.9999999999999998e-30  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5362  two component transcriptional regulator  37.91 
 
 
230 aa  134  1.9999999999999998e-30  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0748621 
 
 
-
 
NC_009523  RoseRS_0761  two component transcriptional regulator  33.48 
 
 
229 aa  134  1.9999999999999998e-30  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.179681 
 
 
-
 
NC_013521  Sked_09340  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  33.93 
 
 
223 aa  133  3e-30  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.217912  normal  0.763127 
 
 
-
 
NC_009767  Rcas_4445  two component transcriptional regulator  33.33 
 
 
229 aa  133  3e-30  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.14031 
 
 
-
 
NC_010002  Daci_5920  two component transcriptional regulator  35.04 
 
 
247 aa  132  5e-30  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_013124  Afer_0200  two component transcriptional regulator, winged helix family  36.4 
 
 
242 aa  132  6e-30  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0955644  n/a   
 
 
-
 
NC_009455  DehaBAV1_0286  two component transcriptional regulator  35.81 
 
 
226 aa  132  6e-30  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0088  two component transcriptional regulator  32.29 
 
 
228 aa  132  6e-30  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_2322  two component transcriptional regulator  37.89 
 
 
232 aa  130  2.0000000000000002e-29  Burkholderia ambifaria AMMD  Bacteria  normal  0.521655  n/a   
 
 
-
 
NC_010551  BamMC406_2200  two component transcriptional regulator  37.89 
 
 
232 aa  130  2.0000000000000002e-29  Burkholderia ambifaria MC40-6  Bacteria  normal  0.365248  normal 
 
 
-
 
NC_007951  Bxe_A3248  two component transcriptional regulator  37.19 
 
 
232 aa  129  3e-29  Burkholderia xenovorans LB400  Bacteria  normal  0.743  normal 
 
 
-
 
NC_010001  Cphy_0742  two component transcriptional regulator  37.24 
 
 
245 aa  129  4.0000000000000003e-29  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2514  two component transcriptional regulator, winged helix family  32.59 
 
 
226 aa  129  5.0000000000000004e-29  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.24701  n/a   
 
 
-
 
NC_010524  Lcho_3763  two component transcriptional regulator  31.09 
 
 
243 aa  128  7.000000000000001e-29  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.225565 
 
 
-
 
NC_013757  Gobs_4602  two component transcriptional regulator, winged helix family  33.63 
 
 
226 aa  128  7.000000000000001e-29  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0994  two component transcriptional regulator  37.89 
 
 
232 aa  128  7.000000000000001e-29  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_2343  two component transcriptional regulator  37.02 
 
 
243 aa  128  7.000000000000001e-29  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00929975  n/a   
 
 
-
 
NC_013552  DhcVS_94  DNA-binding response regulator  35.96 
 
 
228 aa  128  8.000000000000001e-29  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_1312  two component transcriptional regulator, winged helix family  36.68 
 
 
232 aa  128  9.000000000000001e-29  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.1865 
 
 
-
 
NC_011886  Achl_1708  two component transcriptional regulator, winged helix family  32 
 
 
228 aa  128  9.000000000000001e-29  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.476364 
 
 
-
 
NC_003295  RSc3087  response regulator transcription regulator protein  32.14 
 
 
234 aa  127  1.0000000000000001e-28  Ralstonia solanacearum GMI1000  Bacteria  normal  0.160744  normal 
 
 
-
 
NC_007651  BTH_I1025  DNA-binding response regulator KdpE  38.42 
 
 
234 aa  127  1.0000000000000001e-28  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1222  two component transcriptional regulator  38.46 
 
 
235 aa  127  1.0000000000000001e-28  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3104  two component transcriptional regulator  32.17 
 
 
233 aa  126  2.0000000000000002e-28  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.317177  normal 
 
 
-
 
NC_010159  YpAngola_A3578  DNA-binding transcriptional activator KdpE  40.53 
 
 
209 aa  126  2.0000000000000002e-28  Yersinia pestis Angola  Bacteria  normal  0.693422  normal 
 
 
-
 
NC_007794  Saro_0386  two component transcriptional regulator  36.36 
 
 
229 aa  126  2.0000000000000002e-28  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1155  DNA-binding transcriptional activator KdpE  40.53 
 
 
209 aa  126  2.0000000000000002e-28  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.232679  n/a   
 
 
-
 
NC_014158  Tpau_0654  two component transcriptional regulator, winged helix family  34.65 
 
 
229 aa  126  2.0000000000000002e-28  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.200991  n/a   
 
 
-
 
NC_009708  YpsIP31758_1102  DNA-binding transcriptional activator KdpE  40.53 
 
 
209 aa  126  2.0000000000000002e-28  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.000000603864  n/a   
 
 
-
 
NC_014148  Plim_1875  response regulator receiver  31.56 
 
 
230 aa  126  3e-28  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.72432  n/a   
 
 
-
 
NC_010508  Bcenmc03_2307  two component transcriptional regulator  37.37 
 
 
232 aa  126  3e-28  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_2416  two component transcriptional regulator  32.03 
 
 
255 aa  126  3e-28  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.0279623 
 
 
-
 
NC_008060  Bcen_1672  two component transcriptional regulator  37.37 
 
 
232 aa  126  3e-28  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.193412  n/a   
 
 
-
 
NC_008542  Bcen2424_2284  two component transcriptional regulator  37.37 
 
 
232 aa  126  3e-28  Burkholderia cenocepacia HI2424  Bacteria  normal  0.21195  n/a   
 
 
-
 
NC_011831  Cagg_1858  two component transcriptional regulator, winged helix family  34.36 
 
 
227 aa  126  3e-28  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_4344  two component transcriptional regulator  33.33 
 
 
239 aa  126  3e-28  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.325933  normal  0.345767 
 
 
-
 
NC_013441  Gbro_0997  response regulator receiver  34.8 
 
 
228 aa  125  4.0000000000000003e-28  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA1872  DNA-binding response regulator KdpE  37.89 
 
 
234 aa  125  4.0000000000000003e-28  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0800306  n/a   
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  32.74 
 
 
229 aa  125  4.0000000000000003e-28  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5960  two component transcriptional regulator, winged helix family  32.14 
 
 
226 aa  126  4.0000000000000003e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  0.891848  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1088  DNA-binding response regulator KdpE  37.89 
 
 
234 aa  125  4.0000000000000003e-28  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0904  two component transcriptional regulator  33.04 
 
 
229 aa  126  4.0000000000000003e-28  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0335314 
 
 
-
 
NC_008836  BMA10229_A0779  DNA-binding response regulator KdpE  37.89 
 
 
234 aa  125  4.0000000000000003e-28  Burkholderia mallei NCTC 10229  Bacteria  normal  0.97246  n/a   
 
 
-
 
NC_009523  RoseRS_0195  two component transcriptional regulator  32.82 
 
 
243 aa  125  4.0000000000000003e-28  Roseiflexus sp. RS-1  Bacteria  normal  hitchhiker  0.00716616 
 
 
-
 
NC_009076  BURPS1106A_1254  KDP operon transcriptional regulatory protein KdpE  37.89 
 
 
234 aa  125  4.0000000000000003e-28  Burkholderia pseudomallei 1106a  Bacteria  decreased coverage  0.00667548  n/a   
 
 
-
 
NC_009080  BMA10247_0371  DNA-binding response regulator KdpE  37.89 
 
 
234 aa  125  4.0000000000000003e-28  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1397  DNA-binding response regulator KdpE  37.89 
 
 
232 aa  125  5e-28  Burkholderia pseudomallei 1710b  Bacteria  normal  0.089264  n/a   
 
 
-
 
NC_009074  BURPS668_1246  KDP operon transcriptional regulatory protein KdpE  37.89 
 
 
232 aa  125  5e-28  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  33.63 
 
 
226 aa  125  6e-28  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_013093  Amir_6310  two component transcriptional regulator, winged helix family  31.56 
 
 
261 aa  125  6e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  0.534044  n/a   
 
 
-
 
NC_007643  Rru_A1159  two component transcriptional regulator  33.77 
 
 
230 aa  125  7e-28  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_3370  two component transcriptional regulator, winged helix family  32.14 
 
 
234 aa  125  8.000000000000001e-28  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0967  response regulator receiver  33.04 
 
 
229 aa  125  8.000000000000001e-28  Salinispora tropica CNB-440  Bacteria  normal  0.359698  normal  0.873584 
 
 
-
 
NC_013441  Gbro_4088  response regulator receiver  28.19 
 
 
231 aa  124  8.000000000000001e-28  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2289  response regulator receiver:transcriptional regulatory protein, C-terminal  36.04 
 
 
231 aa  124  9e-28  Ralstonia eutropha JMP134  Bacteria  hitchhiker  0.0000420296  n/a   
 
 
-
 
NC_012856  Rpic12D_3023  two component transcriptional regulator, winged helix family  32.14 
 
 
234 aa  124  9e-28  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3778  two component transcriptional regulator, winged helix family  32.29 
 
 
232 aa  124  9e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0820994  normal 
 
 
-
 
NC_013595  Sros_0961  response regulator receiver protein  32.3 
 
 
229 aa  124  1e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11045  transcriptional regulatory protein kdpE  31.42 
 
 
226 aa  124  1e-27  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_6070  two component response regulator  32.74 
 
 
228 aa  124  1e-27  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_4249  two component transcriptional regulator, winged helix family  31.84 
 
 
225 aa  124  1e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  0.316157  normal 
 
 
-
 
NC_008781  Pnap_3600  two component transcriptional regulator  32.9 
 
 
235 aa  124  1e-27  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_1493  two component transcriptional regulator, winged helix family  32.44 
 
 
233 aa  124  2e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011205  SeD_A0810  DNA-binding transcriptional activator KdpE  34.06 
 
 
225 aa  123  2e-27  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A5611  two component transcriptional regulator  36.84 
 
 
232 aa  123  3e-27  Burkholderia sp. 383  Bacteria  normal  0.0731674  normal  0.970504 
 
 
-
 
NC_011830  Dhaf_1587  two component transcriptional regulator, winged helix family  30.57 
 
 
231 aa  122  3e-27  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_3265  two component transcriptional regulator, winged helix family  33.92 
 
 
245 aa  123  3e-27  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.45002  normal 
 
 
-
 
NC_013131  Caci_6788  two component transcriptional regulator, winged helix family  31.44 
 
 
230 aa  123  3e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.241896 
 
 
-
 
NC_009338  Mflv_0082  two component transcriptional regulator  33.48 
 
 
228 aa  123  3e-27  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_3504  two component transcriptional regulator, winged helix family  35.82 
 
 
248 aa  122  4e-27  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2604  two component transcriptional regulator, winged helix family  39.01 
 
 
246 aa  122  4e-27  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1244  DNA-binding transcriptional activator KdpE  35.11 
 
 
229 aa  122  4e-27  Serratia proteamaculans 568  Bacteria  hitchhiker  0.00224308  normal 
 
 
-
 
NC_008726  Mvan_4763  two component transcriptional regulator  29.6 
 
 
230 aa  122  4e-27  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.96205  normal 
 
 
-
 
NC_008752  Aave_0359  two component transcriptional regulator  34.85 
 
 
236 aa  122  4e-27  Acidovorax citrulli AAC00-1  Bacteria  normal  0.274157  normal  0.104876 
 
 
-
 
NC_013947  Snas_0580  two component transcriptional regulator, winged helix family  32.9 
 
 
226 aa  122  5e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3815  two component transcriptional regulator, winged helix family  32.29 
 
 
225 aa  122  5e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0278114  normal  0.0118387 
 
 
-
 
NC_013172  Bfae_09290  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  34.36 
 
 
229 aa  122  5e-27  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_10499  two component system sensor transduction protein regX3  33.63 
 
 
227 aa  122  7e-27  Mycobacterium tuberculosis F11  Bacteria  decreased coverage  2.46064e-66  normal 
 
 
-
 
NC_013131  Caci_8215  two component transcriptional regulator, winged helix family  33.77 
 
 
226 aa  121  7e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  33.19 
 
 
226 aa  122  7e-27  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_008463  PA14_43340  two-component response regulator KdpE  33.33 
 
 
230 aa  121  8e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.807414  normal 
 
 
-
 
NC_007511  Bcep18194_B0450  two component transcriptional regulator  35.56 
 
 
232 aa  121  9e-27  Burkholderia sp. 383  Bacteria  normal  0.153023  normal  0.103513 
 
 
-
 
NC_013174  Jden_1827  two component transcriptional regulator, winged helix family  33.62 
 
 
227 aa  121  9.999999999999999e-27  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2910  response regulator receiver  32.75 
 
 
230 aa  121  9.999999999999999e-27  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1206  two component transcriptional regulator  36.84 
 
 
225 aa  120  9.999999999999999e-27  Enterobacter sp. 638  Bacteria  normal  hitchhiker  0.00352252 
 
 
-
 
NC_007760  Adeh_0891  two component transcriptional regulator  33.85 
 
 
231 aa  120  9.999999999999999e-27  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.391375  n/a   
 
 
-
 
NC_007908  Rfer_2540  two component transcriptional regulator  29.2 
 
 
228 aa  121  9.999999999999999e-27  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6145  two component transcriptional regulator  32.29 
 
 
228 aa  121  9.999999999999999e-27  Frankia sp. EAN1pec  Bacteria  normal  normal  0.788201 
 
 
-
 
NC_011083  SeHA_C0824  DNA-binding transcriptional activator KdpE  33.62 
 
 
225 aa  120  9.999999999999999e-27  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.0770111 
 
 
-
 
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