Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_3504 |
Symbol | |
ID | 7873010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 3841284 |
End bp | 3842030 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643700444 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_002890475 |
Protein GI | 237654161 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGCG CCCAGCCCCC CTCCCCGGTC GTGCTGCTGG TCGAGGACGA GGCCGGCATC CGCCGTTTCG TGCGCACGGC GCTGGAATCC GAGGGCTGCA CGGTGCGCGA GGCCGCCGCG CTCGAGCGCG GCCGCATCGA GCTCGCCAGC CGCCGGCCCG ACCTGCTGGT GCTCGACCTC GGCCTGCCCG ACGGCGACGG CACGGCGCTG CTGGCCGAGC TGCGCGGCTG GAGCGGCATG CCGGTGCTGG TGCTGTCGGC GCGCAGCGAC GAGACCGACA AGGTCGCGGC GCTCGACGCC GGCGCCGACG ACTATCTAGC CAAGCCCTTC GGCGTCGCCG AGTTGCTCGC CCGCGTCCGC GCCCTGCTGC GCCGCGCGCT GCGTCCGCCG CAGGCCGCGG CGTGCATCGC CTTCGGCGAC GTGGAACTCG ACCTCGAGCA GCGCCGGGTG ACGCGTGGCG GCGCGCCGGT CCACCTGACC CCGATCGAGT TCCGCCTGCT CGGCCTGCTC GCCACCGCAG CGGGTCGCGT GGTGACGCAG CGCCAGCTGC TGACCGGCGC CTGGGGCCCG AACCACGTCG AGCACGCACA TTACCTGCGC GTCTATATGG CCGGTTTGCG CCGCAAGCTC GAACCCGACC CGCGCCTGCC CGTCCACATC CTCACCGAAC CCGGCGTGGG CTACCGGCTG GTGCCCGAGC CGCTCAGCGC CGCCAGAACG CCGGCGTCAG CACCACCAGC AGGGTGA
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Protein sequence | MKSAQPPSPV VLLVEDEAGI RRFVRTALES EGCTVREAAA LERGRIELAS RRPDLLVLDL GLPDGDGTAL LAELRGWSGM PVLVLSARSD ETDKVAALDA GADDYLAKPF GVAELLARVR ALLRRALRPP QAAACIAFGD VELDLEQRRV TRGGAPVHLT PIEFRLLGLL ATAAGRVVTQ RQLLTGAWGP NHVEHAHYLR VYMAGLRRKL EPDPRLPVHI LTEPGVGYRL VPEPLSAART PASAPPAG
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