Gene Rpic_3370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3370 
Symbol 
ID6286384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3531011 
End bp3531715 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content67% 
IMG OID642626955 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_001900923 
Protein GI187930436 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCCA TGCCGTTCAC ATTCACACCC ACCGTCCTCG TCATCGACGA CGAGCCGCAT 
ATCCGACGCT TCGTCCGCGC TGCACTGGAG GAGGAAGGCT GCGAAGTCCA CGAAGCCGAC
CGCGTCGAGC GCGGCCTGAT CGAAGCGGGC ACGCGTCAGC CGGATGCGGT GATTCTCGAT
CTCGGCCTGC CCGATGGCGA CGGCATGCAG TTGATTCGCG AGTTGCGCAC CTGGACGGAA
GTGCCGGTGC TCGTGCTTTC GGCCCGCGTG GATGAGCGCG ACAAGATCGA AGCGCTCGAT
GCGGGCGCGG ATGATTACCT GACCAAACCC TTCGGCGTGG GCGAACTGGT TGCGCGCCTG
CGCGTGCTGT TGCGGCGACA TGCCAAGCGC GGCGAAGACG GCGGCAGCGT CATCCGCTTC
GGCGAGGTGG AAGTCGACCT GGCGCGCCGC CTGGTCAGCC GCAACGGCGA GGCGGTGCAT
CTCACCCCGA TCGAATACCG GCTGCTGGCG GTGCTGCTCG GCCGCCGCGG CACCGTGATG
ACGCACCGCG AGCTGCTGCG CGAAGTCTGG GGCCCGGCGC ATTCCGACAG CAGCCACTAC
CTGCGCATCT ACATGGGCCA TCTGCGCCAC AAGCTGGAAC GCGATCCGGC GCGGCCCGAA
CACCTGCTGA CCGAAGTCGG CGTGGGGTAC CGGTTTACGG CGTAA
 
Protein sequence
MRAMPFTFTP TVLVIDDEPH IRRFVRAALE EEGCEVHEAD RVERGLIEAG TRQPDAVILD 
LGLPDGDGMQ LIRELRTWTE VPVLVLSARV DERDKIEALD AGADDYLTKP FGVGELVARL
RVLLRRHAKR GEDGGSVIRF GEVEVDLARR LVSRNGEAVH LTPIEYRLLA VLLGRRGTVM
THRELLREVW GPAHSDSSHY LRIYMGHLRH KLERDPARPE HLLTEVGVGY RFTA