Gene Plim_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1875 
Symbol 
ID9138577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2449723 
End bp2450415 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content58% 
IMG OID 
Productresponse regulator receiver 
Protein accessionYP_003629904 
Protein GI296122126 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.72432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGCCA ACAGCCATCA CATTCTGATC ATCGAAGATG AGCAACCGAT TCGCAGGTTC 
CTCAAGGCCT CGTTATCGAA CGAGGGCTAT CGGGTCAGTG AAGCAGTGGC CGGTGAAGAA
GGTTTGCGGA TGGCGTCGGC CCAACCACCC GATCTTGTGA TTCTCGATCT GGGTCTGCCC
GACCTCGATG GACAAGACGT GCTCAAGCGG CTTCGGGAAT GGTACACTTC TCCTGTGATC
GTCCTCTCCG CACGGGACCA GGAGACGCAG AAGATCAAGG CACTCGACAG TGGTGCCGAT
GACTACTTGA CCAAGCCGTT CGGCATCGGA GAGCTTCTCG CCCGCATGCG AACGGCCATG
CGTCATGCTC ACCGAGTCGG GCCGGAGGCG ACGACCGCCA CAATTGGTGC TCTTCGTGTT
GATCTGGCAG CCCGGCTCGT TTACCGCAGC GACAAAGAGG TGCATCTGAC GCCGCTCGAA
TACAAGCTTC TGGTGACGAT GATCAAGCAC GCCGGGAAAG TTCTGACGCA CCGGTTTCTG
CTGCGTGAAG TGTGGGGACC GCAGGACTCG CAGGAGAACC ATTACCTGCG GGTCTTCATC
GCCAGCATGC GACGGAAACT CGAAGACGAT CCGGCCCGAC CCCGATACAT CCTGACAGAA
CAAGGAGTCG GTTACCGACT CGCTGTGGAA TGA
 
Protein sequence
MQANSHHILI IEDEQPIRRF LKASLSNEGY RVSEAVAGEE GLRMASAQPP DLVILDLGLP 
DLDGQDVLKR LREWYTSPVI VLSARDQETQ KIKALDSGAD DYLTKPFGIG ELLARMRTAM
RHAHRVGPEA TTATIGALRV DLAARLVYRS DKEVHLTPLE YKLLVTMIKH AGKVLTHRFL
LREVWGPQDS QENHYLRVFI ASMRRKLEDD PARPRYILTE QGVGYRLAVE