Gene Tpau_3248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3248 
Symbol 
ID9157421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp3351521 
End bp3352195 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003648172 
Protein GI296140929 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGTTCG TGTTGGTGGT CGACGACGAG CCGGCGATCT GCCGGACGCT GCGGATCAAT 
CTCAAGGCCC GAGGCTACGA GGTGGAGACG GCGACCGATG GCCGGTCGGC GTTGCAGATC 
GCCCGCGAGC GGACGCCCGA TGTCGTGATC CTCGATCTCG GTCTGCCGGA CATCGACGGG 
GTGACGGTGC TGTCCAAGCT GCGTGAGTTC TGCGCGTCAC CGGTGATCGT GCTGTCGGCG 
CGGCATGGGA GCGACGACAA GGTCGAATCG CTCGACGCCG GTGCCGACGA CTACGTGACC 
AAGCCCTTCG GTATGGACGA GTTCCTCGCC CGGGTGCGGG CGCAGGTGCG GCGGACGGGA 
CTGGTGGATG CGCCGGCGCC GGTGGTCACC GATGCCTTCG AGGTGAACTT CGAGGCGCGG 
ACGGTGACTC GCGACGGTAA GCCCGTGCGG CTCACGCCCA CCGAGTGGAA GATCGTGGAC 
GTGCTGGTGC GCAATGCCGA TCGCCTGGTC TCGCAGCAGA CCCTGCTGCA CGAGGTGTGG 
GGCCCGTCGT ACTCGCGCGA GACGAACTAC CTGCGGGTGT ACCTGGCGCA GCTGCGCCGC 
AAGTTGGAGC CCGACCCCGC GCACCCCCGG TATTTCGTCA CCGAGCCCGG GATGGGGTAC 
CGCTTCATCC CGTAA
 
Protein sequence
MTFVLVVDDE PAICRTLRIN LKARGYEVET ATDGRSALQI ARERTPDVVI LDLGLPDIDG 
VTVLSKLREF CASPVIVLSA RHGSDDKVES LDAGADDYVT KPFGMDEFLA RVRAQVRRTG 
LVDAPAPVVT DAFEVNFEAR TVTRDGKPVR LTPTEWKIVD VLVRNADRLV SQQTLLHEVW 
GPSYSRETNY LRVYLAQLRR KLEPDPAHPR YFVTEPGMGY RFIP