| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3087 |
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| Symbol | kdpE |
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| ID | 1221951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3324532 |
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| End bp | 3325236 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637239505 |
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| Product | response regulator transcription regulator protein |
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| Protein accession | NP_521208 |
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| Protein GI | 17547806 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.160744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTGCCA TGGCCTTCAC CTTCACACCC ACCGTCCTGG TCATCGATGA CGAACCGCAC
ATCCGGCGCT TCGTACGCGC GGCGTTGGAG GCCGAAGGCT GCGAGGTGTT CGAGGCCGAC
CGCGTCGCGC GCGGCCTGAT CGAGGCCGGC ACGCGGCAGC CCGATGCCGT GATCCTCGAT
CTCGGCCTGC CCGACGGCGA CGGCATGTCG TTGATCCGCG ACCTGCGCAC GTGGACGGAA
GTGCCGGTGC TGGTCCTGTC CGCCCGTGTC GACGAGCGCG ACAAGATCGA CGCCCTCGAC
GCCGGCGCCG ATGACTACCT GACCAAACCC TTCGGCGTGG GCGAGCTGAT CGCCCGCCTG
CGCGTGCTGC TGCGCCGCCA TGCCAAGCGC GGCGAAGACG GCGGCAGCAT CATCGCCTTC
GGCGACGTGC AGGTCGACCT GGCCCGCCGC CTGGTCAGCC GCAACGGCGA GCCGGTGCAC
CTGACGCCGA TCGAATACCG CCTGCTGGCC GTGCTGCTCG GCCGGCGCGG CACCGTGATG
ACCCATCGCG AACTGCTGCG CGAGGTCTGG GGCCCGGCGC ATTCGGACAG CAGCCACTAC
CTGCGCATCT ACATGGGCCA CCTGCGCCAC AAGCTGGAGC GCGACCCGGC GCGCCCGCAG
CACCTGCTGA CCGAAGTCGG CGTCGGCTAC CGCTTCGCCG CCTGA
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| Protein sequence | MRAMAFTFTP TVLVIDDEPH IRRFVRAALE AEGCEVFEAD RVARGLIEAG TRQPDAVILD
LGLPDGDGMS LIRDLRTWTE VPVLVLSARV DERDKIDALD AGADDYLTKP FGVGELIARL
RVLLRRHAKR GEDGGSIIAF GDVQVDLARR LVSRNGEPVH LTPIEYRLLA VLLGRRGTVM
THRELLREVW GPAHSDSSHY LRIYMGHLRH KLERDPARPQ HLLTEVGVGY RFAA
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