Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0359 |
Symbol | |
ID | 4665306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 388414 |
End bp | 389124 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639821565 |
Product | two component transcriptional regulator |
Protein accession | YP_968740 |
Protein GI | 120609062 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.274157 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.104876 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCAGC ACCCGCGCAC CGCGATCGTG ATCGAGGACG AGCCCCAGAT CCGCCGCTTC GTGCGCGGCG CGCTTGAGGA GGAGGGCTGG CAGGTGCACG AGGCTGCCAC GTTGCGCGAG GGGCTGTCGG CTGCCGGCAC GCGCCAGCCC GACCTGCTGG TGCTGGACCT GGGGCTACCC GACGGCGACG GCGTGGCACT GATCCGCGAC GTGCGCGGCT GGTCGGCCGT ACCCATCATC GTGCTCTCCG CGCGCACCGA CGAGGCGGAC AAGATCGCCG CCCTCGACGC GGGCGCGGAC GACTACCTCA CCAAGCCTTT CGGCACGGGC GAATTGCTCG CACGCGTGCG CGCCAATCTG CGCAGGCCGC GGCCCGCCAC CGGGCAGGGC CTGCAGGCCG AGGCCGCCGA GCCGGTGTTC CGCTTCGGCG ACATCGAGGT GGACCGGGGG GCGCGCCTCG TGCGGCGCGC GGGTACGGTC GTTCACCTCA CGCCCACCGA GTACCGCATG CTCACCGTCC TGGTGGCCAA CGCGGGCCGC GTCATCACCC AGCGCCAGCT GCTGCGCGAG GTCTGGGGCC CGGCGCGTTC CGACCAGAGC CATTACCTGC GCATCTACAT GGGCCACCTG CGCCAGAAGC TGGAGGCCGA CCCCGCGCAG CCGCGCCACC TGCTGACCGA GACCGGGGTG GGGTACCGCC TGGCCGCCTG A
|
Protein sequence | MTQHPRTAIV IEDEPQIRRF VRGALEEEGW QVHEAATLRE GLSAAGTRQP DLLVLDLGLP DGDGVALIRD VRGWSAVPII VLSARTDEAD KIAALDAGAD DYLTKPFGTG ELLARVRANL RRPRPATGQG LQAEAAEPVF RFGDIEVDRG ARLVRRAGTV VHLTPTEYRM LTVLVANAGR VITQRQLLRE VWGPARSDQS HYLRIYMGHL RQKLEADPAQ PRHLLTETGV GYRLAA
|
| |