| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2284 |
|---|
| Symbol | |
|---|
| ID | 4449602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 2537773 |
|---|
| End bp | 2538471 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639694348 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_835928 |
|---|
| Protein GI | 116690305 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.21195 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAC CCAGCCTGAC CGTCGTCCTG ATCGAGGACG AAAAGCAGAT CCGCCGCTTC
GTGCGCGCCG CGCTCGAAGA GGAGGACATC GCGGTGTTCG AGGCCGAGAC GGGCAAGCAG
GGGCTGATCG ACGCGGCGAC GCGCAAGCCC GATCTCGTGA TCGTCGATCT CGGCCTGCCC
GATACCGACG GCCTCGACGT GATCCGCGAG CTGCGCGGCT GGTCCGAGGT GCCGGTGATC
GTGCTGTCCG CCCGCACGCA GGAAGAGGAG AAGGTCGCGG CGCTCGACGC GGGCGCCGAC
GACTACCTGA CCAAGCCGTT CGGCGTGTCC GAACTGCGTG CGCGGATGCG CGCGCAACTG
CGCCGGCGCA ACCAGGGCGG CGCGAACGAG TCGCCGAAGG TGAGCTTCGG CACCGTGACC
GTCGATCTCG CGCTGCGCCA GGTGTGGCGC GACGACGCGA TCGTCCACCT GACGCCGCTC
GAATACCGGC TGCTCGCGAC GCTCGTGCGT CACGCGGGGC GCGTGCTCAC GCACCGCCAG
CTGCTGCGCG ACGTGTGGGG GCCGTCGCAC GTCGAGAGCC ATCACTATCT GCGCATCTAC
ATGGCGCACC TGCGCCAGAA GCTCGAGGCC GATCCCGCGC AGCCCGAGCA CATCGTCACC
GAGACGGGCG TCGGCTACCG GCTCGTCGGC GCCGTGTGA
|
|---|
| Protein sequence | MSEPSLTVVL IEDEKQIRRF VRAALEEEDI AVFEAETGKQ GLIDAATRKP DLVIVDLGLP
DTDGLDVIRE LRGWSEVPVI VLSARTQEEE KVAALDAGAD DYLTKPFGVS ELRARMRAQL
RRRNQGGANE SPKVSFGTVT VDLALRQVWR DDAIVHLTPL EYRLLATLVR HAGRVLTHRQ
LLRDVWGPSH VESHHYLRIY MAHLRQKLEA DPAQPEHIVT ETGVGYRLVG AV
|
|---|
| |