Gene DhcVS_94 details

Gene Information

• Locus tag: DhcVS_94
• Symbol: rdhD
• ID: 8657048
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: +
• Start bp: 88807
• End bp: 89493
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 52%
• Product: DNA-binding response regulator
• Protein accession: YP_003329595
• Protein GI: 270307537

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGAATA AACGGGTTAT TCCATGTTTA GATGTGAATA ACGGGCGGGT AGTTAAAGGT 
ACCAGTTTTG TAAATCTGCG TGATGCCGGT GACCCGGTGG AACTGGCGGC GCGTTACTAC 
CGCGAAGGTG CTGACGAGCT GGTGTTTTTA GATATTTCAG CTACTACCGA AGAACGCAAG 
ACTATGGCCG AGGTGGTAGA GCAGGTATCT AAGGAGGTTT TTATACCTCT GTGTGTGGGC 
GGCGGTTTGC GGAGCATTGC GGATATGAAT ACTCTGCTGC GGGCCGGCGC TGACAAGGTC 
TCTATAAATT CGGCAGCCGT ATCTGACCCG GATTTGATAA GCCGGGGGGC TGAAAAATTC 
GGCCGCCAGT GTATTGTAGT GGCTGTTGAT GCCAAACGTG AAGGCAGCGG CTGGCAGGTT 
TATACCCATA GCGGAAAGAA ACCCGCCGGG CTGGATGCGG TGGAATGGGC TATTAAGGCA 
GAAGCACTGG GTGCGGGTGA GATACTCCTG ACCAGTATTG ATGCAGACGG TAAAAATACC 
GGATATGACA ATGAGCTTAA CCGGGAAATC AGTTCCCGCT TGAATATACC CGTTATCGCT 
TCAGGCGGGG CGGGTGGCCC GGAAGACTTG TATAACGCCC TGGATAAAGG GCAGGCAGAT 
GCGGTGCTGG CGGCCAGCAT TTTCCATTAC GGGCGTTACA CTATAGCCGA AGTAAAACAA 
TATCTTAAGA GCAAGGGTTT GCCGGTAAGG CTGGAGAACT AA 

 

Protein sequence

MKILVIEDNK DIIDFISLAF QVGWPGIKLE IARRGEDGLE LIEKEAPDAV ILDLGLPDID 
GFEVLKRMRL FSQIPVIILT VRKEELDIVR GLELGADEYM TKPFGQMELL ARLRAILRRQ 
NVMTEEPSII AGPFRFSCYM HKLHYNNREI PLTTTEGMIL HHLAVNSGNV ISHTSLAETV 
WGEEYDGASD SLKVYIHRLR EKIEEDPSNP KIIITKSGVG YMLMKNKV