| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1102 |
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| Symbol | kdpE |
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| ID | 5385824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1303078 |
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| End bp | 1303707 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640864078 |
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| Product | DNA-binding transcriptional activator KdpE |
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| Protein accession | YP_001400083 |
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| Protein GI | 153948878 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000000603864 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCGTATTG CGCTGGAGAG TGAGGGCTGG CGAGTATTTG AGAGTGAGAC GTTACAACGG
GGTCTCATTG AAGCCGGTAC CCGTAAGCCT GATTTGATCA TTCTGGATTT GGGGCTGCCG
GATGGTGATG GCCTGAACTA TATTCAAGAT CTGCGCCAGT GGAGCGCTAT CCCAATCATT
GTGCTATCTG CCCGTAACAA TGAAGAAGAT AAAGTTGCCG CACTGGATGC GGGAGCTGAT
GACTATTTGA GTAAACCTTT TGGTATCAGC GAATTACTGG CTCGGGTACG TGTGGCCTTA
CGTCGCCACA GCGGAGCCAG TCAGGAAAGC CCGTTAGTGA ATTTTGCCGA TATCAGCGTC
GATTTGATCA ACCGCCAAGT CACCCGTGCG GGTGAAAATC TTCACCTGAC GCCCATCGAA
TTTCGTCTGC TTACGGCACT GCTGGCTAAT GCCGGTAAGG TCATTACTCA GCGCCAGCTA
TTGAATCAGG TTTGGGGGCC GAATTATGTC GAGCACAGTC ATTACCTGCG CATTTACATG
GGGCATTTAC GCCAGAAATT AGAAGCCGAT CCCACCCGTC CTAAACACCT GTTAACGGAA
ACCGGTGTTG GCTATCGTTT TATTCCCTAA
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| Protein sequence | MRIALESEGW RVFESETLQR GLIEAGTRKP DLIILDLGLP DGDGLNYIQD LRQWSAIPII
VLSARNNEED KVAALDAGAD DYLSKPFGIS ELLARVRVAL RRHSGASQES PLVNFADISV
DLINRQVTRA GENLHLTPIE FRLLTALLAN AGKVITQRQL LNQVWGPNYV EHSHYLRIYM
GHLRQKLEAD PTRPKHLLTE TGVGYRFIP
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