More than 300 homologs were found in PanDaTox collection
for query gene Caci_1917 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013131  Caci_1917  two component transcriptional regulator, LuxR family  100 
 
 
215 aa  415  9.999999999999999e-116  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2506  response regulator receiver protein  68.69 
 
 
223 aa  283  1.0000000000000001e-75  Streptosporangium roseum DSM 43021  Bacteria  normal  0.189025  normal  0.663488 
 
 
-
 
NC_013131  Caci_0636  two component transcriptional regulator, LuxR family  69.16 
 
 
214 aa  281  5.000000000000001e-75  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.583432 
 
 
-
 
NC_014210  Ndas_1960  two component transcriptional regulator, LuxR family  66.67 
 
 
215 aa  280  1e-74  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000329107  hitchhiker  0.00000396613 
 
 
-
 
NC_009380  Strop_2758  response regulator receiver  65.89 
 
 
220 aa  278  5e-74  Salinispora tropica CNB-440  Bacteria  normal  0.21835  normal  0.0217102 
 
 
-
 
NC_014165  Tbis_3545  LuxR family two component transcriptional regulator  69.01 
 
 
213 aa  276  2e-73  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.701363 
 
 
-
 
NC_013093  Amir_2699  two component transcriptional regulator, LuxR family  66.67 
 
 
226 aa  275  5e-73  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.000000630711  n/a   
 
 
-
 
NC_013595  Sros_9330  response regulator receiver protein  70.56 
 
 
221 aa  275  5e-73  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.603744 
 
 
-
 
NC_013235  Namu_2928  two component transcriptional regulator, LuxR family  63.72 
 
 
243 aa  265  2.9999999999999995e-70  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000012449  hitchhiker  0.0000084288 
 
 
-
 
NC_013947  Snas_5645  two component transcriptional regulator, LuxR family  63.38 
 
 
215 aa  263  2e-69  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.117498 
 
 
-
 
NC_009921  Franean1_4332  two component LuxR family transcriptional regulator  66.2 
 
 
225 aa  261  6e-69  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00650273  normal 
 
 
-
 
NC_013510  Tcur_4729  two component transcriptional regulator, LuxR family  63.38 
 
 
212 aa  255  3e-67  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3908  two component transcriptional regulator, LuxR family  61.97 
 
 
214 aa  248  6e-65  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7246  two component LuxR family transcriptional regulator  58.96 
 
 
215 aa  243  9.999999999999999e-64  Frankia sp. EAN1pec  Bacteria  normal  normal  0.172833 
 
 
-
 
NC_013595  Sros_1653  response regulator receiver protein  59.43 
 
 
220 aa  241  5e-63  Streptosporangium roseum DSM 43021  Bacteria  normal  0.799733  normal 
 
 
-
 
NC_013595  Sros_6197  response regulator receiver protein  59.15 
 
 
215 aa  236  2e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  0.376562  normal 
 
 
-
 
NC_013131  Caci_0198  two component transcriptional regulator, LuxR family  54.46 
 
 
218 aa  230  1e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3933  two component transcriptional regulator, LuxR family  56.54 
 
 
218 aa  228  6e-59  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0423  two component LuxR family transcriptional regulator  56.13 
 
 
213 aa  226  2e-58  Salinispora arenicola CNS-205  Bacteria  normal  0.450903  hitchhiker  0.0058743 
 
 
-
 
NC_013947  Snas_2641  two component transcriptional regulator, LuxR family  59.72 
 
 
220 aa  223  2e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.53526  normal 
 
 
-
 
NC_013093  Amir_0948  two component transcriptional regulator, LuxR family  56.13 
 
 
214 aa  220  9.999999999999999e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4455  two component transcriptional regulator, LuxR family  57.67 
 
 
213 aa  220  9.999999999999999e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0353  two component LuxR family transcriptional regulator  54.25 
 
 
213 aa  220  9.999999999999999e-57  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2757  two component transcriptional regulator, LuxR family  61.32 
 
 
214 aa  219  1.9999999999999999e-56  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0593961  n/a   
 
 
-
 
NC_013595  Sros_2300  response regulator receiver protein  58.49 
 
 
213 aa  218  6e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3915  two component transcriptional regulator, LuxR family  54.88 
 
 
226 aa  217  8.999999999999998e-56  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.161295  normal  0.0598624 
 
 
-
 
NC_013947  Snas_2250  two component transcriptional regulator, LuxR family  54.93 
 
 
217 aa  216  2e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137071 
 
 
-
 
NC_013595  Sros_4051  response regulator receiver protein  55.19 
 
 
214 aa  216  2e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  hitchhiker  0.004601 
 
 
-
 
NC_013595  Sros_4416  response regulator receiver protein  58.88 
 
 
228 aa  216  2.9999999999999998e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0335955 
 
 
-
 
NC_013739  Cwoe_3717  two component transcriptional regulator, LuxR family  51.87 
 
 
217 aa  214  7e-55  Conexibacter woesei DSM 14684  Bacteria  normal  0.82478  normal 
 
 
-
 
NC_013131  Caci_1254  two component transcriptional regulator, LuxR family  54.21 
 
 
213 aa  213  1.9999999999999998e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3762  two component transcriptional regulator, LuxR family  54.84 
 
 
221 aa  212  2.9999999999999995e-54  Conexibacter woesei DSM 14684  Bacteria  normal  0.355338  normal  0.813095 
 
 
-
 
NC_013947  Snas_4725  two component transcriptional regulator, LuxR family  57.48 
 
 
218 aa  210  1e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.37253  normal 
 
 
-
 
NC_013947  Snas_2341  two component transcriptional regulator, LuxR family  53.49 
 
 
215 aa  211  1e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3331  two component transcriptional regulator, LuxR family  59.43 
 
 
216 aa  208  6e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0226882  normal  0.21338 
 
 
-
 
NC_014210  Ndas_0307  two component transcriptional regulator, LuxR family  57.94 
 
 
214 aa  207  1e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.115356  normal  0.300779 
 
 
-
 
NC_014210  Ndas_3517  two component transcriptional regulator, LuxR family  53.74 
 
 
214 aa  207  1e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.498529  normal 
 
 
-
 
NC_009664  Krad_1992  two component transcriptional regulator, LuxR family  53.74 
 
 
218 aa  207  1e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0203  two component transcriptional regulator, LuxR family  50.7 
 
 
218 aa  205  3e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0610  two component transcriptional regulator, LuxR family  53.52 
 
 
215 aa  203  1e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.440854 
 
 
-
 
NC_007333  Tfu_0330  LuxR response regulator receiver  53.24 
 
 
219 aa  202  3e-51  Thermobifida fusca YX  Bacteria  normal  0.673991  n/a   
 
 
-
 
NC_009338  Mflv_2280  two component LuxR family transcriptional regulator  51.4 
 
 
214 aa  202  3e-51  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.92337  normal  0.457915 
 
 
-
 
NC_013235  Namu_3862  two component transcriptional regulator, LuxR family  52.58 
 
 
213 aa  201  6e-51  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00236143  normal 
 
 
-
 
NC_009921  Franean1_2299  two component LuxR family transcriptional regulator  52.13 
 
 
242 aa  201  8e-51  Frankia sp. EAN1pec  Bacteria  normal  0.0379402  normal 
 
 
-
 
NC_013235  Namu_0810  two component transcriptional regulator, LuxR family  50.46 
 
 
219 aa  200  9.999999999999999e-51  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6137  response regulator receiver protein  55.66 
 
 
209 aa  200  9.999999999999999e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.633642  normal  0.13111 
 
 
-
 
NC_008726  Mvan_0263  two component LuxR family transcriptional regulator  51.17 
 
 
214 aa  199  1.9999999999999998e-50  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.103764 
 
 
-
 
NC_013757  Gobs_2541  two component transcriptional regulator, LuxR family  49.3 
 
 
215 aa  197  7e-50  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.92112  n/a   
 
 
-
 
NC_013172  Bfae_12650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.77 
 
 
217 aa  197  1.0000000000000001e-49  Brachybacterium faecium DSM 4810  Bacteria  normal  0.129544  n/a   
 
 
-
 
NC_013739  Cwoe_2389  two component transcriptional regulator, LuxR family  50.7 
 
 
215 aa  197  1.0000000000000001e-49  Conexibacter woesei DSM 14684  Bacteria  normal  0.205007  decreased coverage  0.00115827 
 
 
-
 
NC_009921  Franean1_0340  two component LuxR family transcriptional regulator  50.23 
 
 
221 aa  196  2.0000000000000003e-49  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0115466 
 
 
-
 
NC_013595  Sros_8722  response regulator receiver protein  51.17 
 
 
210 aa  195  3e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0530  two component transcriptional regulator, LuxR family  53.7 
 
 
214 aa  195  4.0000000000000005e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0201422  n/a   
 
 
-
 
NC_008705  Mkms_3983  two component LuxR family transcriptional regulator  49.53 
 
 
214 aa  195  5.000000000000001e-49  Mycobacterium sp. KMS  Bacteria  normal  0.714996  normal 
 
 
-
 
NC_009077  Mjls_3924  two component LuxR family transcriptional regulator  49.53 
 
 
214 aa  195  5.000000000000001e-49  Mycobacterium sp. JLS  Bacteria  normal  normal  0.278782 
 
 
-
 
NC_008726  Mvan_5906  two component LuxR family transcriptional regulator  50.69 
 
 
228 aa  192  3e-48  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.363446  normal 
 
 
-
 
NC_014210  Ndas_2092  two component transcriptional regulator, LuxR family  51.16 
 
 
216 aa  192  4e-48  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1359  two component transcriptional regulator, LuxR family  52.02 
 
 
219 aa  192  4e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.323671 
 
 
-
 
NC_009338  Mflv_0968  two component LuxR family transcriptional regulator  50.23 
 
 
220 aa  191  7e-48  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_4386  two component LuxR family transcriptional regulator  49.76 
 
 
209 aa  189  2.9999999999999997e-47  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3909  two component LuxR family transcriptional regulator  48.82 
 
 
211 aa  188  4e-47  Mycobacterium sp. MCS  Bacteria  normal  0.755905  n/a   
 
 
-
 
NC_013739  Cwoe_5165  two component transcriptional regulator, LuxR family  46.23 
 
 
214 aa  188  7e-47  Conexibacter woesei DSM 14684  Bacteria  normal  0.852017  normal 
 
 
-
 
NC_013739  Cwoe_4605  two component transcriptional regulator, LuxR family  53.33 
 
 
222 aa  187  9e-47  Conexibacter woesei DSM 14684  Bacteria  normal  0.554224  normal 
 
 
-
 
NC_013530  Xcel_1460  two component transcriptional regulator, LuxR family  51.17 
 
 
224 aa  186  2e-46  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.659068  n/a   
 
 
-
 
NC_013739  Cwoe_3050  two component transcriptional regulator, LuxR family  48.11 
 
 
214 aa  185  4e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.127757  normal 
 
 
-
 
NC_013530  Xcel_0212  two component transcriptional regulator, LuxR family  54.13 
 
 
218 aa  185  4e-46  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_17580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.89 
 
 
211 aa  184  1.0000000000000001e-45  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0315732  normal  0.450672 
 
 
-
 
NC_013521  Sked_09230  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.08 
 
 
218 aa  182  2.0000000000000003e-45  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.310613 
 
 
-
 
NC_013510  Tcur_4661  two component transcriptional regulator, LuxR family  53.3 
 
 
220 aa  183  2.0000000000000003e-45  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3103  two component transcriptional regulator, LuxR family  55.45 
 
 
223 aa  183  2.0000000000000003e-45  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.156187  hitchhiker  0.000316121 
 
 
-
 
NC_014210  Ndas_2133  two component transcriptional regulator, LuxR family  52.83 
 
 
214 aa  182  3e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0320  two component transcriptional regulator, LuxR family  48.37 
 
 
218 aa  181  7e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.308686  normal  0.0930841 
 
 
-
 
NC_013530  Xcel_0244  two component transcriptional regulator, LuxR family  48.83 
 
 
216 aa  180  1e-44  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_7225  two component LuxR family transcriptional regulator  47.64 
 
 
229 aa  179  2e-44  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3490  two component LuxR family transcriptional regulator  50.23 
 
 
218 aa  180  2e-44  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6494  two component LuxR family transcriptional regulator  48.39 
 
 
235 aa  177  1e-43  Frankia sp. EAN1pec  Bacteria  normal  0.0149487  normal  0.504125 
 
 
-
 
NC_014210  Ndas_2432  two component transcriptional regulator, LuxR family  50.95 
 
 
233 aa  176  2e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.199835  normal  0.129248 
 
 
-
 
NC_013172  Bfae_11890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.23 
 
 
213 aa  175  5e-43  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_35890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.57 
 
 
239 aa  174  8e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479689 
 
 
-
 
NC_013530  Xcel_2524  two component transcriptional regulator, LuxR family  52.68 
 
 
228 aa  174  9.999999999999999e-43  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0516799  n/a   
 
 
-
 
NC_013235  Namu_1746  two component transcriptional regulator, LuxR family  48.13 
 
 
222 aa  173  1.9999999999999998e-42  Nakamurella multipartita DSM 44233  Bacteria  normal  0.139209  normal  0.0305301 
 
 
-
 
NC_009921  Franean1_6700  two component LuxR family transcriptional regulator  49.3 
 
 
257 aa  173  1.9999999999999998e-42  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4689  two component transcriptional regulator, LuxR family  53.52 
 
 
216 aa  172  3.9999999999999995e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_2504  two component LuxR family transcriptional regulator  43.72 
 
 
218 aa  171  1e-41  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00866313  normal 
 
 
-
 
NC_009664  Krad_4020  two component transcriptional regulator, LuxR family  54.45 
 
 
215 aa  169  3e-41  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.000894251  normal  0.0789775 
 
 
-
 
NC_013739  Cwoe_0318  two component transcriptional regulator, LuxR family  47.06 
 
 
221 aa  167  1e-40  Conexibacter woesei DSM 14684  Bacteria  normal  0.29485  normal  0.172489 
 
 
-
 
NC_013595  Sros_3199  response regulator receiver protein  47.85 
 
 
212 aa  167  1e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0084  two component LuxR family transcriptional regulator  49.07 
 
 
239 aa  166  2e-40  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2073  two component LuxR family transcriptional regulator  43.19 
 
 
217 aa  166  2e-40  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.776481 
 
 
-
 
NC_013235  Namu_3029  two component transcriptional regulator, LuxR family  44.13 
 
 
815 aa  161  7e-39  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00871852  hitchhiker  0.00628617 
 
 
-
 
NC_014158  Tpau_0972  two component transcriptional regulator, LuxR family  48.11 
 
 
208 aa  161  9e-39  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_07220  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.24 
 
 
226 aa  157  1e-37  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.740026 
 
 
-
 
NC_013739  Cwoe_1501  two component transcriptional regulator, LuxR family  43.38 
 
 
228 aa  152  2.9999999999999998e-36  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.138703 
 
 
-
 
NC_013595  Sros_0503  response regulator receiver protein  44.09 
 
 
226 aa  146  2.0000000000000003e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.544154  normal 
 
 
-
 
NC_013595  Sros_2445  response regulator receiver protein  40.72 
 
 
218 aa  118  7.999999999999999e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0115114  normal  0.02149 
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  38.73 
 
 
221 aa  103  1e-21  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  35.18 
 
 
222 aa  104  1e-21  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.764026 
 
 
-
 
NC_009921  Franean1_2449  two component LuxR family transcriptional regulator  37.62 
 
 
211 aa  102  3e-21  Frankia sp. EAN1pec  Bacteria  normal  normal  0.265588 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  39.49 
 
 
213 aa  103  3e-21  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  39.61 
 
 
222 aa  102  5e-21  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
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