More than 300 homologs were found in PanDaTox collection
for query gene BBta_2676 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_2676  putative ABC transporter, permease protein  100 
 
 
258 aa  512  1e-144  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.931281  normal  0.413503 
 
 
-
 
NC_007948  Bpro_2935  binding-protein-dependent transport systems inner membrane component  33.19 
 
 
252 aa  131  1.0000000000000001e-29  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_2281  binding-protein-dependent transport systems inner membrane component  33.04 
 
 
248 aa  126  3e-28  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.0000000535744  unclonable  0.00000000025197 
 
 
-
 
NC_011830  Dhaf_2658  binding-protein-dependent transport systems inner membrane component  31.6 
 
 
251 aa  125  6e-28  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000111568  n/a   
 
 
-
 
NC_009079  BMA10247_A0697  taurine ABC transporter, permease protein  35.42 
 
 
283 aa  123  3e-27  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2133  taurine ABC transporter, permease protein  35.42 
 
 
283 aa  123  3e-27  Burkholderia pseudomallei 1106a  Bacteria  normal  0.186654  n/a   
 
 
-
 
NC_009075  BURPS668_A2220  taurine ABC transporter, permease protein  35.42 
 
 
283 aa  123  3e-27  Burkholderia pseudomallei 668  Bacteria  normal  0.215273  n/a   
 
 
-
 
NC_010511  M446_0464  binding-protein-dependent transport systems inner membrane component  35.42 
 
 
288 aa  123  3e-27  Methylobacterium sp. 4-46  Bacteria  normal  0.349721  hitchhiker  0.00645779 
 
 
-
 
NC_008835  BMA10229_2019  taurine ABC transporter, permease protein  35.42 
 
 
285 aa  123  3e-27  Burkholderia mallei NCTC 10229  Bacteria  normal  0.484134  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0620  permease component of taurine ABC transporter  35.42 
 
 
253 aa  122  4e-27  Burkholderia pseudomallei 1710b  Bacteria  decreased coverage  0.00192231  n/a   
 
 
-
 
NC_006349  BMAA1580  taurine ABC transporter, permease protein  35.42 
 
 
253 aa  122  5e-27  Burkholderia mallei ATCC 23344  Bacteria  normal  0.477521  n/a   
 
 
-
 
NC_007650  BTH_II0802  taurine ABC transporter, permease protein  36.46 
 
 
283 aa  122  5e-27  Burkholderia thailandensis E264  Bacteria  normal  0.207449  n/a   
 
 
-
 
NC_009675  Anae109_3869  binding-protein-dependent transport systems inner membrane component  36.08 
 
 
274 aa  122  8e-27  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  32.67 
 
 
273 aa  121  9.999999999999999e-27  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  32.67 
 
 
273 aa  121  9.999999999999999e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_1575  binding-protein-dependent transport systems inner membrane component  33.16 
 
 
254 aa  120  1.9999999999999998e-26  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0747147  n/a   
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  32.67 
 
 
273 aa  119  3.9999999999999996e-26  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_009485  BBta_6545  ABC transporter permease  34.64 
 
 
269 aa  119  3.9999999999999996e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.276106 
 
 
-
 
NC_011832  Mpal_1076  binding-protein-dependent transport systems inner membrane component  31.38 
 
 
269 aa  119  4.9999999999999996e-26  Methanosphaerula palustris E1-9c  Archaea  normal  0.406887  normal  0.454808 
 
 
-
 
NC_007298  Daro_2152  binding-protein dependent transport system inner membrane protein  33.51 
 
 
271 aa  118  9e-26  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.529987 
 
 
-
 
NC_009485  BBta_2566  ABC transporter, membrane subunit  33.33 
 
 
252 aa  117  9.999999999999999e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.345232 
 
 
-
 
NC_009012  Cthe_2803  binding-protein-dependent transport systems inner membrane component  31.22 
 
 
259 aa  117  9.999999999999999e-26  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00122675  n/a   
 
 
-
 
NC_009485  BBta_3299  putative sulfonate ABC transporter, permease protein  32 
 
 
286 aa  117  1.9999999999999998e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.201269  normal  0.262094 
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  31.06 
 
 
273 aa  117  1.9999999999999998e-25  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_007953  Bxe_C0735  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  33.16 
 
 
273 aa  117  1.9999999999999998e-25  Burkholderia xenovorans LB400  Bacteria  normal  0.714635  normal 
 
 
-
 
NC_008786  Veis_1108  binding-protein-dependent transport systems inner membrane component  31.61 
 
 
255 aa  117  1.9999999999999998e-25  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.135552 
 
 
-
 
NC_014150  Bmur_0403  binding-protein-dependent transport systems inner membrane component  29.44 
 
 
256 aa  116  3e-25  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3464  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
294 aa  117  3e-25  Xanthobacter autotrophicus Py2  Bacteria  normal  0.136656  normal 
 
 
-
 
NC_010511  M446_0397  binding-protein-dependent transport systems inner membrane component  30.97 
 
 
285 aa  116  3.9999999999999997e-25  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.987071 
 
 
-
 
NC_007925  RPC_0846  binding-protein-dependent transport systems inner membrane component  32.09 
 
 
255 aa  115  7.999999999999999e-25  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.185051 
 
 
-
 
NC_009635  Maeo_0992  binding-protein-dependent transport systems inner membrane component  30 
 
 
254 aa  115  7.999999999999999e-25  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_011887  Mnod_7932  binding-protein-dependent transport systems inner membrane component  31.63 
 
 
283 aa  114  1.0000000000000001e-24  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_1575  binding-protein-dependent transport systems inner membrane component  29.91 
 
 
266 aa  114  1.0000000000000001e-24  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  27.13 
 
 
277 aa  113  2.0000000000000002e-24  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_009636  Smed_1127  binding-protein-dependent transport systems inner membrane component  32.82 
 
 
267 aa  114  2.0000000000000002e-24  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0467  taurine ABC transporter, permease protein, putative  31.25 
 
 
272 aa  113  3e-24  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0406  putative taurine ABC transporter, permease protein  31.25 
 
 
272 aa  113  3e-24  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1812  ABC transporter, permease protein  35.32 
 
 
257 aa  113  4.0000000000000004e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  0.554956  normal  0.627316 
 
 
-
 
NC_007644  Moth_0466  binding-protein dependent transport system inner membrane protein  30.21 
 
 
262 aa  112  4.0000000000000004e-24  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_3413  binding-protein-dependent transport systems inner membrane component  31.2 
 
 
280 aa  112  8.000000000000001e-24  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_1153  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  29.76 
 
 
258 aa  112  8.000000000000001e-24  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.23101  n/a   
 
 
-
 
NC_007492  Pfl01_0254  binding-protein dependent transport system inner membrane protein  31.22 
 
 
279 aa  112  9e-24  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.57663 
 
 
-
 
NC_012793  GWCH70_2621  binding-protein-dependent transport systems inner membrane component  28.26 
 
 
281 aa  111  9e-24  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000218671  n/a   
 
 
-
 
NC_010511  M446_5130  binding-protein-dependent transport systems inner membrane component  31.3 
 
 
272 aa  111  9e-24  Methylobacterium sp. 4-46  Bacteria  normal  0.612608  normal  0.0470724 
 
 
-
 
NC_010676  Bphyt_4371  binding-protein-dependent transport systems inner membrane component  35.98 
 
 
306 aa  111  1.0000000000000001e-23  Burkholderia phytofirmans PsJN  Bacteria  normal  0.17867  normal 
 
 
-
 
NC_004311  BRA1188  taurine ABC transporter, permease protein  31.16 
 
 
250 aa  111  1.0000000000000001e-23  Brucella suis 1330  Bacteria  normal  0.0612406  n/a   
 
 
-
 
NC_009712  Mboo_2012  binding-protein-dependent transport systems inner membrane component  31.65 
 
 
280 aa  111  1.0000000000000001e-23  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.338733  normal  0.193625 
 
 
-
 
NC_009512  Pput_0246  binding-protein-dependent transport systems inner membrane component  32.11 
 
 
279 aa  111  1.0000000000000001e-23  Pseudomonas putida F1  Bacteria  normal  0.0570948  normal  0.0921514 
 
 
-
 
NC_009485  BBta_1369  ABC transporter membrane protein  30.24 
 
 
272 aa  111  1.0000000000000001e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0458182 
 
 
-
 
NC_009485  BBta_2677  putative ABC transporter, permease protein  34.55 
 
 
255 aa  111  1.0000000000000001e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.58951 
 
 
-
 
NC_011830  Dhaf_3643  binding-protein-dependent transport systems inner membrane component  27.35 
 
 
252 aa  110  2.0000000000000002e-23  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000799696  n/a   
 
 
-
 
NC_013595  Sros_1818  ABC transporter, permease protein  31.4 
 
 
263 aa  110  2.0000000000000002e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.493092 
 
 
-
 
NC_009668  Oant_3592  binding-protein-dependent transport systems inner membrane component  29.17 
 
 
273 aa  110  2.0000000000000002e-23  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0355  putative ABC aliphatic sulfonates transporter, permease subunit  28 
 
 
264 aa  110  2.0000000000000002e-23  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_0423  binding-protein-dependent transport systems inner membrane component  28 
 
 
264 aa  110  2.0000000000000002e-23  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1453  alkanesulfonate transporter permease subunit  27.89 
 
 
263 aa  110  2.0000000000000002e-23  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0231  binding-protein-dependent transport systems inner membrane component  30.65 
 
 
279 aa  110  3e-23  Pseudomonas putida KT2440  Bacteria  normal  0.33405  hitchhiker  0.000710194 
 
 
-
 
NC_009634  Mevan_0512  binding-protein-dependent transport systems inner membrane component  28.69 
 
 
253 aa  110  3e-23  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_012917  PC1_0024  binding-protein-dependent transport systems inner membrane component  29.51 
 
 
264 aa  110  3e-23  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0030  binding-protein-dependent transport systems inner membrane component  29.1 
 
 
264 aa  110  3e-23  Pectobacterium wasabiae WPP163  Bacteria  normal  0.050552  n/a   
 
 
-
 
NC_008541  Arth_3081  binding-protein-dependent transport systems inner membrane component  29.18 
 
 
257 aa  110  3e-23  Arthrobacter sp. FB24  Bacteria  normal  0.0826963  n/a   
 
 
-
 
CP001637  EcDH1_3240  binding-protein-dependent transport systems inner membrane component  31.2 
 
 
275 aa  109  4.0000000000000004e-23  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_02150  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  29.96 
 
 
244 aa  109  4.0000000000000004e-23  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_5321  taurine ABC transporter, permease protein  29.65 
 
 
285 aa  109  4.0000000000000004e-23  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS2712  sulfonate ABC transporter permease  29.13 
 
 
282 aa  109  4.0000000000000004e-23  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_0673  binding-protein dependent transport system inner membrane protein  30.16 
 
 
275 aa  109  4.0000000000000004e-23  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0666321  normal  0.331074 
 
 
-
 
NC_007530  GBAA_2920  sulfonate ABC transporter permease protein  29.13 
 
 
282 aa  109  4.0000000000000004e-23  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A3058  taurine ABC transporter, permease protein  28.82 
 
 
274 aa  109  4.0000000000000004e-23  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011981  Avi_7197  ABC transporter membrane spanning protein (aliphatic sulphonate)  32.2 
 
 
272 aa  109  4.0000000000000004e-23  Agrobacterium vitis S4  Bacteria  normal  0.0116141  n/a   
 
 
-
 
NC_007005  Psyr_2515  binding-protein dependent transport system inner membrane protein  30.69 
 
 
282 aa  109  5e-23  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.313862  normal 
 
 
-
 
NC_009436  Ent638_0840  taurine transporter subunit  33.68 
 
 
275 aa  109  5e-23  Enterobacter sp. 638  Bacteria  normal  normal  0.276647 
 
 
-
 
NC_009620  Smed_4214  binding-protein-dependent transport systems inner membrane component  34.19 
 
 
281 aa  109  5e-23  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2479  binding-protein-dependent transport systems inner membrane component  31.5 
 
 
258 aa  108  6e-23  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2791  binding-protein-dependent transport systems inner membrane component  31.82 
 
 
302 aa  108  6e-23  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0464  binding-protein-dependent transport systems inner membrane component  31.75 
 
 
273 aa  108  7.000000000000001e-23  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4861  binding-protein-dependent transport systems inner membrane component  32.64 
 
 
275 aa  108  9.000000000000001e-23  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0877464 
 
 
-
 
NC_007953  Bxe_C0099  nitrate/nitrite/cyanate ABC transporter inner membrane protein  30.74 
 
 
277 aa  108  9.000000000000001e-23  Burkholderia xenovorans LB400  Bacteria  normal  0.291864  normal  0.355691 
 
 
-
 
NC_009050  Rsph17029_3613  binding-protein-dependent transport systems inner membrane component  34.62 
 
 
377 aa  107  1e-22  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK2748  sulfonate/taurine ABC transporter permease  32.43 
 
 
274 aa  108  1e-22  Bacillus cereus E33L  Bacteria  normal  0.947189  n/a   
 
 
-
 
NC_013131  Caci_4306  binding-protein-dependent transport systems inner membrane component  28.27 
 
 
278 aa  108  1e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0649738  hitchhiker  0.00238236 
 
 
-
 
NC_013739  Cwoe_5601  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
281 aa  108  1e-22  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_1745  binding-protein-dependent transport systems inner membrane component  27.82 
 
 
280 aa  107  1e-22  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2492  ABC aliphatic sulfonates transporter, innermembrane subunit  27.82 
 
 
280 aa  107  1e-22  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.773133 
 
 
-
 
NC_007952  Bxe_B0692  ABC taurine transporter, inner membrane subunit  35.45 
 
 
306 aa  107  1e-22  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.00000000618741  normal  0.0440204 
 
 
-
 
NC_009972  Haur_2787  binding-protein-dependent transport systems inner membrane component  28.45 
 
 
272 aa  108  1e-22  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.334714  n/a   
 
 
-
 
NC_008726  Mvan_3413  binding-protein-dependent transport systems inner membrane component  29.31 
 
 
271 aa  107  1e-22  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0409101  normal  0.884011 
 
 
-
 
NC_010510  Mrad2831_6162  binding-protein-dependent transport systems inner membrane component  34.18 
 
 
262 aa  107  1e-22  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.577279 
 
 
-
 
NC_013517  Sterm_0483  binding-protein-dependent transport systems inner membrane component  28.92 
 
 
275 aa  107  2e-22  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1957  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
273 aa  107  2e-22  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3065  binding-protein-dependent transport systems inner membrane component  32.05 
 
 
280 aa  107  2e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.228654 
 
 
-
 
NC_007492  Pfl01_3295  binding-protein dependent transport system inner membrane protein  32.31 
 
 
279 aa  107  2e-22  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2882  binding-protein-dependent transport systems inner membrane component  29.83 
 
 
268 aa  107  2e-22  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.80309  n/a   
 
 
-
 
NC_009674  Bcer98_1998  binding-protein-dependent transport systems inner membrane component  26.92 
 
 
283 aa  107  2e-22  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.894639  n/a   
 
 
-
 
NC_009708  YpsIP31758_1848  ABC transporter permease  33.33 
 
 
273 aa  107  2e-22  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_19510  ABC transporter permease  32.04 
 
 
274 aa  107  2e-22  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A3693  taurine transporter subunit  32.06 
 
 
284 aa  107  2e-22  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_3936  taurine transporter subunit  32.06 
 
 
284 aa  107  2e-22  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_0260  taurine transporter subunit  32.06 
 
 
284 aa  107  2e-22  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_1129  taurine transport system permease protein TauC  26.89 
 
 
241 aa  107  2e-22  Campylobacter curvus 525.92  Bacteria  normal  0.774255  n/a   
 
 
-
 
NC_010501  PputW619_4981  binding-protein-dependent transport systems inner membrane component  31.58 
 
 
279 aa  107  2e-22  Pseudomonas putida W619  Bacteria  normal  normal  0.588836 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>