More than 300 homologs were found in PanDaTox collection
for query gene Rsph17029_3613 on replicon NC_009050
Organism: Rhodobacter sphaeroides ATCC 17029



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009050  Rsph17029_3613  binding-protein-dependent transport systems inner membrane component  100 
 
 
377 aa  756    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_3612  binding-protein-dependent transport systems inner membrane component  42.91 
 
 
276 aa  187  2e-46  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_1974  binding-protein dependent transport system inner membrane protein  33.07 
 
 
261 aa  139  4.999999999999999e-32  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000226251  normal 
 
 
-
 
NC_002947  PP_0208  nitrate ABC transporter, permease protein, putative  35.02 
 
 
260 aa  139  7.999999999999999e-32  Pseudomonas putida KT2440  Bacteria  normal  normal  0.473726 
 
 
-
 
NC_014150  Bmur_0153  binding-protein-dependent transport systems inner membrane component  31.97 
 
 
277 aa  137  3.0000000000000003e-31  Brachyspira murdochii DSM 12563  Bacteria  normal  0.589472  n/a   
 
 
-
 
NC_008463  PA14_19510  ABC transporter permease  38.11 
 
 
274 aa  137  3.0000000000000003e-31  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_1679  ABC transporter permease  37.7 
 
 
274 aa  136  6.0000000000000005e-31  Pseudomonas aeruginosa PA7  Bacteria  normal  0.451747  n/a   
 
 
-
 
NC_007644  Moth_1982  binding-protein dependent transport system inner membrane protein  34 
 
 
266 aa  134  1.9999999999999998e-30  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.187248  normal 
 
 
-
 
NC_007953  Bxe_C0981  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  33.92 
 
 
279 aa  134  1.9999999999999998e-30  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_1064  tricarballylate dehydrogenase  75.32 
 
 
505 aa  133  5e-30  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1575  binding-protein-dependent transport systems inner membrane component  32.46 
 
 
254 aa  132  9e-30  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0747147  n/a   
 
 
-
 
NC_008786  Veis_1108  binding-protein-dependent transport systems inner membrane component  33.78 
 
 
255 aa  131  2.0000000000000002e-29  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.135552 
 
 
-
 
NC_007492  Pfl01_0254  binding-protein dependent transport system inner membrane protein  33.77 
 
 
279 aa  130  3e-29  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.57663 
 
 
-
 
NC_007492  Pfl01_3295  binding-protein dependent transport system inner membrane protein  37.45 
 
 
279 aa  130  3e-29  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_1171  taurine ABC transporter permease  36.15 
 
 
272 aa  130  3e-29  Pseudomonas aeruginosa PA7  Bacteria  normal  0.104716  n/a   
 
 
-
 
NC_009012  Cthe_2803  binding-protein-dependent transport systems inner membrane component  29.17 
 
 
259 aa  130  3e-29  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00122675  n/a   
 
 
-
 
NC_014211  Ndas_4937  binding-protein-dependent transport systems inner membrane component  37.6 
 
 
287 aa  130  4.0000000000000003e-29  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0773955  normal 
 
 
-
 
NC_002947  PP_0231  binding-protein-dependent transport systems inner membrane component  33.19 
 
 
279 aa  130  5.0000000000000004e-29  Pseudomonas putida KT2440  Bacteria  normal  0.33405  hitchhiker  0.000710194 
 
 
-
 
NC_010501  PputW619_4981  binding-protein-dependent transport systems inner membrane component  33.94 
 
 
279 aa  130  5.0000000000000004e-29  Pseudomonas putida W619  Bacteria  normal  normal  0.588836 
 
 
-
 
NC_009712  Mboo_2012  binding-protein-dependent transport systems inner membrane component  33.74 
 
 
280 aa  130  6e-29  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.338733  normal  0.193625 
 
 
-
 
NC_007952  Bxe_B2638  ABC sulfonate transporter, inner membrane subunit  32 
 
 
279 aa  129  8.000000000000001e-29  Burkholderia xenovorans LB400  Bacteria  normal  0.0950643  hitchhiker  0.0000361652 
 
 
-
 
NC_007492  Pfl01_3160  binding-protein dependent transport system inner membrane protein  31.33 
 
 
274 aa  127  2.0000000000000002e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.913146  normal 
 
 
-
 
NC_007650  BTH_II0802  taurine ABC transporter, permease protein  34.55 
 
 
283 aa  128  2.0000000000000002e-28  Burkholderia thailandensis E264  Bacteria  normal  0.207449  n/a   
 
 
-
 
NC_011832  Mpal_1145  binding-protein-dependent transport systems inner membrane component  28.97 
 
 
279 aa  127  3e-28  Methanosphaerula palustris E1-9c  Archaea  normal  0.208956  normal 
 
 
-
 
NC_009078  BURPS1106A_A2133  taurine ABC transporter, permease protein  33.33 
 
 
283 aa  127  4.0000000000000003e-28  Burkholderia pseudomallei 1106a  Bacteria  normal  0.186654  n/a   
 
 
-
 
NC_006349  BMAA1580  taurine ABC transporter, permease protein  33.33 
 
 
253 aa  127  4.0000000000000003e-28  Burkholderia mallei ATCC 23344  Bacteria  normal  0.477521  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0620  permease component of taurine ABC transporter  33.33 
 
 
253 aa  127  4.0000000000000003e-28  Burkholderia pseudomallei 1710b  Bacteria  decreased coverage  0.00192231  n/a   
 
 
-
 
NC_009075  BURPS668_A2220  taurine ABC transporter, permease protein  33.33 
 
 
283 aa  127  4.0000000000000003e-28  Burkholderia pseudomallei 668  Bacteria  normal  0.215273  n/a   
 
 
-
 
NC_009079  BMA10247_A0697  taurine ABC transporter, permease protein  33.33 
 
 
283 aa  126  5e-28  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_2019  taurine ABC transporter, permease protein  33.33 
 
 
285 aa  126  5e-28  Burkholderia mallei NCTC 10229  Bacteria  normal  0.484134  n/a   
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  34.38 
 
 
277 aa  126  6e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_007953  Bxe_C0735  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  31.47 
 
 
273 aa  126  7e-28  Burkholderia xenovorans LB400  Bacteria  normal  0.714635  normal 
 
 
-
 
NC_009512  Pput_0246  binding-protein-dependent transport systems inner membrane component  34.27 
 
 
279 aa  126  7e-28  Pseudomonas putida F1  Bacteria  normal  0.0570948  normal  0.0921514 
 
 
-
 
NC_007005  Psyr_2515  binding-protein dependent transport system inner membrane protein  35.62 
 
 
282 aa  125  1e-27  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.313862  normal 
 
 
-
 
NC_004578  PSPTO_5321  taurine ABC transporter, permease protein  31.82 
 
 
285 aa  124  2e-27  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4060  binding-protein dependent transport system inner membrane protein  31.44 
 
 
256 aa  125  2e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3875  binding-protein-dependent transport systems inner membrane component  36.86 
 
 
289 aa  125  2e-27  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_1369  ABC transporter membrane protein  34.05 
 
 
272 aa  124  2e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0458182 
 
 
-
 
NC_010322  PputGB1_0255  binding-protein-dependent transport systems inner membrane component  34.09 
 
 
279 aa  124  3e-27  Pseudomonas putida GB-1  Bacteria  normal  0.796344  normal 
 
 
-
 
NC_005945  BAS2712  sulfonate ABC transporter permease  30.86 
 
 
282 aa  124  4e-27  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_2920  sulfonate ABC transporter permease protein  30.86 
 
 
282 aa  124  4e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_12960  taurine ABC transporter permease  36.45 
 
 
272 aa  123  5e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.299757  normal  0.321121 
 
 
-
 
NC_009832  Spro_4564  taurine transporter subunit  32.31 
 
 
279 aa  123  7e-27  Serratia proteamaculans 568  Bacteria  normal  normal  0.746145 
 
 
-
 
NC_009485  BBta_2535  putative taurine ABC transporter, permease protein  32.39 
 
 
282 aa  122  9e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.254862  normal 
 
 
-
 
NC_011757  Mchl_4201  binding-protein-dependent transport systems inner membrane component  34.8 
 
 
305 aa  122  9.999999999999999e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1734  binding-protein-dependent transport systems inner membrane component  32.65 
 
 
252 aa  122  9.999999999999999e-27  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1998  binding-protein-dependent transport systems inner membrane component  31.82 
 
 
283 aa  122  9.999999999999999e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.894639  n/a   
 
 
-
 
NC_012793  GWCH70_2621  binding-protein-dependent transport systems inner membrane component  29.64 
 
 
281 aa  121  1.9999999999999998e-26  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000218671  n/a   
 
 
-
 
NC_004311  BRA1188  taurine ABC transporter, permease protein  35.29 
 
 
250 aa  121  1.9999999999999998e-26  Brucella suis 1330  Bacteria  normal  0.0612406  n/a   
 
 
-
 
NC_004578  PSPTO_2787  ABC transporter, permease protein  33.91 
 
 
282 aa  121  1.9999999999999998e-26  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0328614  n/a   
 
 
-
 
NC_010085  Nmar_1283  binding-protein-dependent transporter inner membrane protein  29.51 
 
 
252 aa  121  1.9999999999999998e-26  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  0.0507526 
 
 
-
 
NC_010511  M446_4508  binding-protein-dependent transport systems inner membrane component  35.44 
 
 
277 aa  121  1.9999999999999998e-26  Methylobacterium sp. 4-46  Bacteria  normal  0.854714  normal  0.909107 
 
 
-
 
NC_013510  Tcur_0464  binding-protein-dependent transport systems inner membrane component  33.78 
 
 
273 aa  121  1.9999999999999998e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_4330  binding-protein-dependent transport systems inner membrane component  38.14 
 
 
276 aa  120  3.9999999999999996e-26  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.936191 
 
 
-
 
NC_013510  Tcur_1385  binding-protein-dependent transport systems inner membrane component  34.38 
 
 
284 aa  120  4.9999999999999996e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0616622  n/a   
 
 
-
 
NC_010501  PputW619_5010  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
260 aa  120  4.9999999999999996e-26  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_5517  binding-protein-dependent transport systems inner membrane component  29.91 
 
 
256 aa  119  6e-26  Variovorax paradoxus S110  Bacteria  normal  0.16627  n/a   
 
 
-
 
NC_009428  Rsph17025_0761  binding-protein-dependent transport systems inner membrane component  35.41 
 
 
412 aa  119  6e-26  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_16930  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  32.93 
 
 
322 aa  119  7.999999999999999e-26  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.327  normal  0.410158 
 
 
-
 
NC_013530  Xcel_0712  binding-protein-dependent transport systems inner membrane component  31.58 
 
 
302 aa  119  7.999999999999999e-26  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.900284  n/a   
 
 
-
 
NC_011898  Ccel_0436  binding-protein-dependent transport systems inner membrane component  29.32 
 
 
255 aa  119  7.999999999999999e-26  Clostridium cellulolyticum H10  Bacteria  normal  0.0448966  n/a   
 
 
-
 
NC_008825  Mpe_A0924  ABC transporter permease protein  29.25 
 
 
258 aa  119  7.999999999999999e-26  Methylibium petroleiphilum PM1  Bacteria  normal  0.175022  normal 
 
 
-
 
CP001509  ECD_00317  taurine transporter subunit  34.6 
 
 
275 aa  119  9.999999999999999e-26  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3261  taurine transporter subunit  34.6 
 
 
275 aa  119  9.999999999999999e-26  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_00321  hypothetical protein  34.6 
 
 
275 aa  119  9.999999999999999e-26  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5146  binding-protein-dependent transport systems inner membrane component  35.02 
 
 
277 aa  118  9.999999999999999e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0887356  n/a   
 
 
-
 
NC_011769  DvMF_0521  binding-protein-dependent transport systems inner membrane component  31.67 
 
 
292 aa  119  9.999999999999999e-26  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.367955 
 
 
-
 
NC_009428  Rsph17025_0765  binding-protein-dependent transport systems inner membrane component  34.14 
 
 
265 aa  118  1.9999999999999998e-25  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_3151  binding-protein-dependent transport systems inner membrane component  30.32 
 
 
263 aa  118  1.9999999999999998e-25  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_0213  binding-protein-dependent transport systems inner membrane component  31.8 
 
 
252 aa  118  1.9999999999999998e-25  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1692  putative ABC transporter membrane protein  34.23 
 
 
281 aa  117  3e-25  Thermobifida fusca YX  Bacteria  hitchhiker  0.00465779  n/a   
 
 
-
 
NC_007348  Reut_B5801  binding-protein dependent transport system inner membrane protein  32.03 
 
 
290 aa  117  3e-25  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0391  taurine transporter subunit  33.65 
 
 
275 aa  117  3e-25  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1489  nitrate transport permease  30.08 
 
 
278 aa  117  3e-25  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1488  binding-protein dependent transport system inner membrane protein  32.14 
 
 
280 aa  117  3e-25  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.106569  normal  0.790334 
 
 
-
 
NC_009708  YpsIP31758_3936  taurine transporter subunit  33.18 
 
 
284 aa  117  3e-25  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_0260  taurine transporter subunit  33.18 
 
 
284 aa  117  3e-25  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1899  binding-protein-dependent transport systems inner membrane component  35.78 
 
 
275 aa  117  3e-25  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_0442  taurine transporter subunit  34.12 
 
 
275 aa  117  3e-25  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A3693  taurine transporter subunit  33.18 
 
 
284 aa  117  3e-25  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_3150  binding-protein-dependent transport systems inner membrane component  34.43 
 
 
273 aa  117  3.9999999999999997e-25  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3299  putative sulfonate ABC transporter, permease protein  32.58 
 
 
286 aa  117  3.9999999999999997e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.201269  normal  0.262094 
 
 
-
 
NC_010678  Rpic_4010  binding-protein-dependent transport systems inner membrane component  33.98 
 
 
298 aa  117  3.9999999999999997e-25  Ralstonia pickettii 12J  Bacteria  normal  0.281805  normal 
 
 
-
 
NC_012857  Rpic12D_4123  binding-protein-dependent transport systems inner membrane component  33.98 
 
 
298 aa  117  3.9999999999999997e-25  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_0673  binding-protein dependent transport system inner membrane protein  34.92 
 
 
275 aa  116  5e-25  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0666321  normal  0.331074 
 
 
-
 
NC_010725  Mpop_4185  binding-protein-dependent transport systems inner membrane component  35.03 
 
 
283 aa  117  5e-25  Methylobacterium populi BJ001  Bacteria  normal  0.321257  normal 
 
 
-
 
NC_009436  Ent638_0840  taurine transporter subunit  34.3 
 
 
275 aa  116  5e-25  Enterobacter sp. 638  Bacteria  normal  normal  0.276647 
 
 
-
 
NC_013131  Caci_4306  binding-protein-dependent transport systems inner membrane component  32.38 
 
 
278 aa  116  6e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0649738  hitchhiker  0.00238236 
 
 
-
 
NC_011757  Mchl_3671  binding-protein-dependent transport systems inner membrane component  34.03 
 
 
287 aa  116  6e-25  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0347715  normal 
 
 
-
 
NC_010172  Mext_3346  binding-protein-dependent transport systems inner membrane component  34.03 
 
 
291 aa  116  6e-25  Methylobacterium extorquens PA1  Bacteria  normal  0.252204  normal 
 
 
-
 
NC_011658  BCAH187_A3058  taurine ABC transporter, permease protein  29.6 
 
 
274 aa  116  6.9999999999999995e-25  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010510  Mrad2831_6154  binding-protein-dependent transport systems inner membrane component  34.8 
 
 
295 aa  116  6.9999999999999995e-25  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2676  putative ABC transporter, permease protein  34.82 
 
 
258 aa  116  7.999999999999999e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.931281  normal  0.413503 
 
 
-
 
NC_009485  BBta_6545  ABC transporter permease  31.82 
 
 
269 aa  115  8.999999999999998e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.276106 
 
 
-
 
NC_002947  PP_0239  binding-protein-dependent transport systems inner membrane component  30.83 
 
 
265 aa  115  1.0000000000000001e-24  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.00756787 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  28.51 
 
 
273 aa  115  1.0000000000000001e-24  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  28.93 
 
 
273 aa  115  1.0000000000000001e-24  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_014165  Tbis_1380  binding-protein-dependent transporter inner membrane component  30.64 
 
 
277 aa  115  1.0000000000000001e-24  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.153307 
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  28.51 
 
 
273 aa  115  1.0000000000000001e-24  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_010505  Mrad2831_1763  binding-protein-dependent transport systems inner membrane component  36.65 
 
 
282 aa  115  1.0000000000000001e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
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