Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3150 |
Symbol | |
ID | 5324029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3300329 |
End bp | 3301150 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640792098 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001328809 |
Protein GI | 150398342 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATA GCGTTGCCAT CCATCTCAGA CCGCGCACCC TTTGGATTTC CCGGGCGCAG CGGCGCGGAA CGGCTGGTAT TCTGGCGGTG CTGCTGCTGT GGCAGATATC CGTCTGGATC ATCGATCTTC CGCCCTATTT CTATCCTGCC CCCCGGGACG TTCTGGCGGC ATTCGGCGAA CTGATCCGGA ACGGCATTCT GATCGAGTAT CTCGCCGACA GCTCATGGCG TTATGCCGTG AGCGTCGGGA CGGGATTGTC TCTTGGGATC ATCTTCGGAC TGCTGATCGG GCTATCGGGC TTCTGGTCGC GGCTGCTGGG GTCGATCATC AGGTTTTTCT ACGCCATTGT CGAGGTTGCC TGGATTCCGT TGCTGGTAAT CTGGATCGGT TATGGTTTCC CCACCATTCT GATCGCCATC TCCTATGTGG TTTTCTTCCC AGTACTTTAT AACACGCTGA CAGGGGTGCA GACGATCCAG CCGGTCCTTA TCAACGCGGT CAGGACGCTT GGCGCCTCGC GCTTTCAGGT GCTGACTTCG GTTATCCTGC CCGCCGCCTT GCCGAATATC ATGACAGGGC TGCGGGTCGG GGCGGGTTTC GCTTTCCGGG GACTTATCTT TGCCGAGATG ATCGCCGCCG GTTCCGGGCT CGGCTTCCTG ATTTTTGATG GGGCGAGCAC ACGCCAGACC GACCGTGTCG TTGTCGGCAT GATCATGATG GGGCTGCTGT GGCTGTTGAT GGACCGTCTG CTCCTGCGGC CGATCGAGCG CGCCACAATC GAACGCTGGG GGCTTGTCCG GGCTCAGGGA GGTGAATCAT GA
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Protein sequence | MTDSVAIHLR PRTLWISRAQ RRGTAGILAV LLLWQISVWI IDLPPYFYPA PRDVLAAFGE LIRNGILIEY LADSSWRYAV SVGTGLSLGI IFGLLIGLSG FWSRLLGSII RFFYAIVEVA WIPLLVIWIG YGFPTILIAI SYVVFFPVLY NTLTGVQTIQ PVLINAVRTL GASRFQVLTS VILPAALPNI MTGLRVGAGF AFRGLIFAEM IAAGSGLGFL IFDGASTRQT DRVVVGMIMM GLLWLLMDRL LLRPIERATI ERWGLVRAQG GES
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