Gene Smed_3150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3150 
Symbol 
ID5324029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3300329 
End bp3301150 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content59% 
IMG OID640792098 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001328809 
Protein GI150398342 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA GCGTTGCCAT CCATCTCAGA CCGCGCACCC TTTGGATTTC CCGGGCGCAG 
CGGCGCGGAA CGGCTGGTAT TCTGGCGGTG CTGCTGCTGT GGCAGATATC CGTCTGGATC
ATCGATCTTC CGCCCTATTT CTATCCTGCC CCCCGGGACG TTCTGGCGGC ATTCGGCGAA
CTGATCCGGA ACGGCATTCT GATCGAGTAT CTCGCCGACA GCTCATGGCG TTATGCCGTG
AGCGTCGGGA CGGGATTGTC TCTTGGGATC ATCTTCGGAC TGCTGATCGG GCTATCGGGC
TTCTGGTCGC GGCTGCTGGG GTCGATCATC AGGTTTTTCT ACGCCATTGT CGAGGTTGCC
TGGATTCCGT TGCTGGTAAT CTGGATCGGT TATGGTTTCC CCACCATTCT GATCGCCATC
TCCTATGTGG TTTTCTTCCC AGTACTTTAT AACACGCTGA CAGGGGTGCA GACGATCCAG
CCGGTCCTTA TCAACGCGGT CAGGACGCTT GGCGCCTCGC GCTTTCAGGT GCTGACTTCG
GTTATCCTGC CCGCCGCCTT GCCGAATATC ATGACAGGGC TGCGGGTCGG GGCGGGTTTC
GCTTTCCGGG GACTTATCTT TGCCGAGATG ATCGCCGCCG GTTCCGGGCT CGGCTTCCTG
ATTTTTGATG GGGCGAGCAC ACGCCAGACC GACCGTGTCG TTGTCGGCAT GATCATGATG
GGGCTGCTGT GGCTGTTGAT GGACCGTCTG CTCCTGCGGC CGATCGAGCG CGCCACAATC
GAACGCTGGG GGCTTGTCCG GGCTCAGGGA GGTGAATCAT GA
 
Protein sequence
MTDSVAIHLR PRTLWISRAQ RRGTAGILAV LLLWQISVWI IDLPPYFYPA PRDVLAAFGE 
LIRNGILIEY LADSSWRYAV SVGTGLSLGI IFGLLIGLSG FWSRLLGSII RFFYAIVEVA
WIPLLVIWIG YGFPTILIAI SYVVFFPVLY NTLTGVQTIQ PVLINAVRTL GASRFQVLTS
VILPAALPNI MTGLRVGAGF AFRGLIFAEM IAAGSGLGFL IFDGASTRQT DRVVVGMIMM
GLLWLLMDRL LLRPIERATI ERWGLVRAQG GES