Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3151 |
Symbol | |
ID | 5324030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3301147 |
End bp | 3301938 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640792099 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001328810 |
Protein GI | 150398343 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCAC GGCGATCACG GCCGTTCATG CGGAGGGGTT CGGCTGCATT GACGGGCATT CTGCCCTTCA TCGCCCTATT TGCCGCTTGG GCATTACTTC CAGCCCTTGC CGGGATTCCG GAGTTCAAAC TGCCGTCGCC CGGCAAAGTC CTGAATACAT TTACCAATAT GATGGCCGAT GGCAGTTTGA TGGCCCATGT CTGGGCGTCC TTGCAACGAC TGGCGGCCGG TTATCTGCTG GGCAATCTGA TCGCCATACC GCTGGGGCTT GCAATTGCCC TGAACCGCGC GGTTTCCGAG ACCCTGACGC CGGTGCTCAG CTTTTTCCAG TCCATCGCCG GAATCGCGTG GGTTCCCCTG GCGATCATCT GGTTTGGAGT CGGTAAAGGC TCGGTCCTGT TCGTCATCGC CAACACGATC TTTTTCGCCT CGATCTATTC GACGGTCATC GGCGTGCGCA CCATCCCGCG GGTTCTTTTC CGTGCCTCTC TGTCGCATGG TGCAAGCCGA TGGGATATTA TCAGCAATGT CGTGATCCCG GGCGCCATGG TGCAGATCCT GGTCGGGCTG CGCACATCAA TGGCCTATGG CTGGCGGGCA TTGGTGGCCG GTGAAATGAT CGCCGGGACC GATGGGGTCG GCTACATGAC GCTTGAGGCC GTGCAATGGT ATCAGGCTGA AATCGTCATT CTGGGCATGA TTGTCATCGG TGTGTTGTGG TTGCTGATGG ACGCGTTGCT CTTCACGCCC ATCGAACGGG TGACGGTGCG CAGGTGGGGC ATGGTCAGAT GA
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Protein sequence | MIARRSRPFM RRGSAALTGI LPFIALFAAW ALLPALAGIP EFKLPSPGKV LNTFTNMMAD GSLMAHVWAS LQRLAAGYLL GNLIAIPLGL AIALNRAVSE TLTPVLSFFQ SIAGIAWVPL AIIWFGVGKG SVLFVIANTI FFASIYSTVI GVRTIPRVLF RASLSHGASR WDIISNVVIP GAMVQILVGL RTSMAYGWRA LVAGEMIAGT DGVGYMTLEA VQWYQAEIVI LGMIVIGVLW LLMDALLFTP IERVTVRRWG MVR
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