Gene Smed_3151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3151 
Symbol 
ID5324030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3301147 
End bp3301938 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content59% 
IMG OID640792099 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001328810 
Protein GI150398343 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCAC GGCGATCACG GCCGTTCATG CGGAGGGGTT CGGCTGCATT GACGGGCATT 
CTGCCCTTCA TCGCCCTATT TGCCGCTTGG GCATTACTTC CAGCCCTTGC CGGGATTCCG
GAGTTCAAAC TGCCGTCGCC CGGCAAAGTC CTGAATACAT TTACCAATAT GATGGCCGAT
GGCAGTTTGA TGGCCCATGT CTGGGCGTCC TTGCAACGAC TGGCGGCCGG TTATCTGCTG
GGCAATCTGA TCGCCATACC GCTGGGGCTT GCAATTGCCC TGAACCGCGC GGTTTCCGAG
ACCCTGACGC CGGTGCTCAG CTTTTTCCAG TCCATCGCCG GAATCGCGTG GGTTCCCCTG
GCGATCATCT GGTTTGGAGT CGGTAAAGGC TCGGTCCTGT TCGTCATCGC CAACACGATC
TTTTTCGCCT CGATCTATTC GACGGTCATC GGCGTGCGCA CCATCCCGCG GGTTCTTTTC
CGTGCCTCTC TGTCGCATGG TGCAAGCCGA TGGGATATTA TCAGCAATGT CGTGATCCCG
GGCGCCATGG TGCAGATCCT GGTCGGGCTG CGCACATCAA TGGCCTATGG CTGGCGGGCA
TTGGTGGCCG GTGAAATGAT CGCCGGGACC GATGGGGTCG GCTACATGAC GCTTGAGGCC
GTGCAATGGT ATCAGGCTGA AATCGTCATT CTGGGCATGA TTGTCATCGG TGTGTTGTGG
TTGCTGATGG ACGCGTTGCT CTTCACGCCC ATCGAACGGG TGACGGTGCG CAGGTGGGGC
ATGGTCAGAT GA
 
Protein sequence
MIARRSRPFM RRGSAALTGI LPFIALFAAW ALLPALAGIP EFKLPSPGKV LNTFTNMMAD 
GSLMAHVWAS LQRLAAGYLL GNLIAIPLGL AIALNRAVSE TLTPVLSFFQ SIAGIAWVPL
AIIWFGVGKG SVLFVIANTI FFASIYSTVI GVRTIPRVLF RASLSHGASR WDIISNVVIP
GAMVQILVGL RTSMAYGWRA LVAGEMIAGT DGVGYMTLEA VQWYQAEIVI LGMIVIGVLW
LLMDALLFTP IERVTVRRWG MVR