Gene Shel_02150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_02150 
Symbol 
ID8394107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp265332 
End bp266066 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content63% 
IMG OID644984987 
ProductABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
Protein accessionYP_003142634 
Protein GI257062962 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAGGC TTCTGGGTTA CCTGCTCGCC ATCATGTTCA TCCTGGCAGG ATGGCAGCTG 
ACCGCCATGG CTCTGGGAAG CGCTGCGTTG CCCGAGGTTC TGCCCGCGCT GCAGAACGTG
GTCATGTACT TCGACGAGAT TGCGCCGGCC TTCGGCGTGA GCCTGTACCG CGTGGTGATC
GCCATGGTCA TCGGCACCGT TCTAGCCATC CCGTTGGGTC TGGTCTGCGG CCGGTCGCCC
CGGGTCGACG CCGTGTTCGC GCCCGTTCTC TACTTCCTGT ACCCGCTACC CAAAGTGGTG
CTGTTGCCTG TGTTCATCGT GTTGCTGGGT CTGGCCGACG CGCCCAAGAT CGCCCTTATC
GCACTGACCA TCTTCTTCCA GGTTCTGGTC ACGGTGCGAG ACGCCACCAA GAGCGTGCCC
GAGGACAGCG TGCTGTCCGT GCGTTCGCTG GGTGCGAGCC GTCTGGATAT CTATCGCCAC
GTCATCGTGC CTGCCACGCT GCCCGAGCTG TTCACGGCGC AGCGCATTTC CAGCGGCACT
GCCGTGGCCA TCCTGTTCTT CGCGGAGAGC TTCGCCGGCT CCACGGGTCT GGGTTACTTC
ATCGCCGACG CATGGGCCCT GCTCAACTAC CCGAAGATGT TCGCAGGCAT CATCGCCATG
GCCGTGCTGG GCGTCATCTT GTACGAGATC TTCGACATCG CCGAACGCCG TCTGACCCGC
TGGCGCCGCC TGTAA
 
Protein sequence
MRRLLGYLLA IMFILAGWQL TAMALGSAAL PEVLPALQNV VMYFDEIAPA FGVSLYRVVI 
AMVIGTVLAI PLGLVCGRSP RVDAVFAPVL YFLYPLPKVV LLPVFIVLLG LADAPKIALI
ALTIFFQVLV TVRDATKSVP EDSVLSVRSL GASRLDIYRH VIVPATLPEL FTAQRISSGT
AVAILFFAES FAGSTGLGYF IADAWALLNY PKMFAGIIAM AVLGVILYEI FDIAERRLTR
WRRL