113 homologs were found in PanDaTox collection
for query gene TK90_1874 on replicon NC_013889
Organism: Thioalkalivibrio sp. K90mix



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013889  TK90_1874  putative anti-sigma regulatory factor, serine/threonine protein kinase  100 
 
 
137 aa  281  2.0000000000000002e-75  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.122382  normal 
 
 
-
 
NC_008346  Swol_1794  putative anti-sigma regulatory factor, serine/threonine protein kinase  44.44 
 
 
134 aa  112  2.0000000000000002e-24  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_4032  putative anti-sigma regulatory factor, serine/threonine protein kinase  39.69 
 
 
155 aa  98.2  4e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_0700  putative anti-sigma regulatory factor, serine/threonine protein kinase  38.1 
 
 
136 aa  92  2e-18  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA1666  sensor histidine kinase  36.72 
 
 
142 aa  85.1  3e-16  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0063  putative anti-sigma regulatory factor (serine/threonine protein kinase)  32.31 
 
 
140 aa  80.1  0.000000000000009  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.0713993 
 
 
-
 
NC_013216  Dtox_0933  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.59 
 
 
142 aa  80.1  0.000000000000009  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0815302  normal  0.189071 
 
 
-
 
NC_009051  Memar_2469  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.04 
 
 
135 aa  78.2  0.00000000000004  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_009712  Mboo_1160  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.3 
 
 
138 aa  75.1  0.0000000000003  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.620968  normal 
 
 
-
 
NC_009767  Rcas_1195  anti-sigma-factor antagonist  36.89 
 
 
269 aa  73.9  0.0000000000007  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.123525  normal 
 
 
-
 
NC_008609  Ppro_1525  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.05 
 
 
141 aa  73.2  0.000000000001  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_1493  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.25 
 
 
132 aa  70.9  0.000000000005  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_2331  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.06 
 
 
151 aa  70.9  0.000000000006  Rhodothermus marinus DSM 4252  Bacteria  normal  0.571842  n/a   
 
 
-
 
NC_008312  Tery_5013  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.06 
 
 
141 aa  68.6  0.00000000003  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_007512  Plut_1040  putative anti-sigma regulatory factor (serine/threonine protein kinase)  30.71 
 
 
143 aa  68.2  0.00000000004  Chlorobium luteolum DSM 273  Bacteria  normal  0.469899  normal  0.536702 
 
 
-
 
NC_007512  Plut_0863  putative anti-sigma regulatory factor  35 
 
 
143 aa  67.4  0.00000000006  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.286315 
 
 
-
 
NC_011831  Cagg_2555  anti-sigma-factor antagonist  29.46 
 
 
249 aa  65.9  0.0000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0721  serine phosphatase  30.47 
 
 
885 aa  64.7  0.0000000004  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2161  anti-sigma-factor antagonist  34.71 
 
 
250 aa  64.3  0.0000000006  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2664  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.57 
 
 
139 aa  63.9  0.0000000007  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2102  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.6 
 
 
143 aa  63.9  0.0000000008  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2419  cyclic nucleotide-binding protein  31.62 
 
 
563 aa  63.5  0.0000000008  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.871595  normal 
 
 
-
 
NC_002620  TC0837  RsbW protein, putative  33.06 
 
 
152 aa  63.5  0.0000000009  Chlamydia muridarum Nigg  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1929  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.77 
 
 
139 aa  63.5  0.0000000009  Methanosphaerula palustris E1-9c  Archaea  normal  0.0887571  normal  0.148865 
 
 
-
 
NC_008741  Dvul_2982  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.33 
 
 
138 aa  61.6  0.000000004  Desulfovibrio vulgaris DP4  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2527  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.91 
 
 
147 aa  61.2  0.000000005  Xanthobacter autotrophicus Py2  Bacteria  normal  0.557848  normal 
 
 
-
 
NC_013530  Xcel_2857  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.04 
 
 
136 aa  60.8  0.000000006  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2661  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.06 
 
 
151 aa  59.7  0.00000001  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0789133  n/a   
 
 
-
 
NC_008942  Mlab_1452  hypothetical protein  31.3 
 
 
777 aa  60.1  0.00000001  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_010814  Glov_0750  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.81 
 
 
141 aa  58.9  0.00000002  Geobacter lovleyi SZ  Bacteria  normal  0.194451  n/a   
 
 
-
 
NC_013204  Elen_2936  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.65 
 
 
140 aa  59.3  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1422  anti-sigma-factor antagonist  30.43 
 
 
250 aa  58.5  0.00000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1014  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.29 
 
 
147 aa  57.8  0.00000005  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.000121242  n/a   
 
 
-
 
NC_007517  Gmet_1228  putative anti-sigma regulatory factor (serine/threonine protein kinase)  37.37 
 
 
144 aa  56.2  0.0000001  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.011235 
 
 
-
 
NC_009972  Haur_4167  cyclic nucleotide-binding protein  29.41 
 
 
570 aa  56.2  0.0000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_2977  anti-sigma regulatory factor (Ser/Thr protein kinase  34.65 
 
 
141 aa  55.8  0.0000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_1232  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.04 
 
 
139 aa  54.3  0.0000006  Sphingomonas wittichii RW1  Bacteria  normal  0.240625  normal  0.172209 
 
 
-
 
NC_002977  MCA1685  anti-sigma B factor  36 
 
 
142 aa  53.5  0.0000009  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2441  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.3 
 
 
138 aa  53.5  0.0000009  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008346  Swol_1997  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.96 
 
 
495 aa  52.4  0.000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2452  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.04 
 
 
147 aa  52.4  0.000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_5461  signal transduction histidine kinase  31.58 
 
 
732 aa  52.8  0.000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.245128 
 
 
-
 
NC_009483  Gura_2043  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.65 
 
 
141 aa  51.6  0.000004  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000388253  n/a   
 
 
-
 
NC_011831  Cagg_2113  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.41 
 
 
137 aa  51.2  0.000005  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_1826  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.05 
 
 
147 aa  50.4  0.000007  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1875  anti-sigma regulatory factor  34.34 
 
 
139 aa  50.4  0.000008  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000000201046  n/a   
 
 
-
 
NC_008346  Swol_0614  anti-sigma F factor  31.15 
 
 
148 aa  49.3  0.00002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_2905  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.32 
 
 
149 aa  48.9  0.00002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.94653  normal  0.27326 
 
 
-
 
NC_011146  Gbem_2650  putative anti-sigma regulatory factor, serine/threonine protein kinase  33 
 
 
141 aa  48.9  0.00002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1584  putative anti-sigma regulatory factor, serine/threonine protein kinase  33 
 
 
141 aa  48.9  0.00002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_3443  putative anti-sigma regulatory factor (Ser/Thr protein kinase)  29.85 
 
 
147 aa  48.5  0.00003  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0106512  normal 
 
 
-
 
NC_010725  Mpop_5039  signal transduction histidine kinase  34.04 
 
 
381 aa  48.1  0.00003  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1990  sensor histidine kinase  25 
 
 
132 aa  47.4  0.00006  Dechloromonas aromatica RCB  Bacteria  normal  0.415496  normal  0.485112 
 
 
-
 
NC_008346  Swol_2061  Na+-driven multidrug efflux pump-like protein  20.45 
 
 
560 aa  47.4  0.00006  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.488699  n/a   
 
 
-
 
NC_010717  PXO_03913  hypothetical protein  30 
 
 
143 aa  47.4  0.00006  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_2336  signal transduction histidine kinase  28.42 
 
 
3706 aa  47.4  0.00006  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_1497  anti-sigma F factor  27.93 
 
 
148 aa  47.4  0.00007  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_1500  anti-sigma regulatory kinase  35 
 
 
180 aa  47  0.00009  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1426  rsbW protein, putative  37.63 
 
 
149 aa  46.6  0.0001  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4441  protein serine phosphatase with GAF(s) sensor(s)  24 
 
 
792 aa  46.6  0.0001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.794262  normal 
 
 
-
 
NC_010172  Mext_4526  histidine kinase dimerisation/phosphoacceptor  34.04 
 
 
381 aa  47  0.0001  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.315667 
 
 
-
 
NC_011757  Mchl_4986  signal transduction histidine kinase  34.04 
 
 
381 aa  47  0.0001  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.196103 
 
 
-
 
NC_012918  GM21_1749  putative anti-sigma regulatory factor, serine/threonine protein kinase  23.08 
 
 
147 aa  46.6  0.0001  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007955  Mbur_0842  multisensor signal transduction histidine kinase  26.04 
 
 
727 aa  45.8  0.0002  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0150  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.32 
 
 
180 aa  45.4  0.0002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.460194 
 
 
-
 
NC_011146  Gbem_2468  putative anti-sigma regulatory factor, serine/threonine protein kinase  24.06 
 
 
147 aa  46.2  0.0002  Geobacter bemidjiensis Bem  Bacteria  normal  0.0214018  n/a   
 
 
-
 
NC_013173  Dbac_0348  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.71 
 
 
147 aa  45.4  0.0002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_3675  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.4 
 
 
143 aa  45.4  0.0003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.709341  n/a   
 
 
-
 
NC_013132  Cpin_2705  signal transduction histidine kinase  26.37 
 
 
856 aa  45.1  0.0003  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_7100  signal transduction histidine kinase  34.57 
 
 
357 aa  44.7  0.0004  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4301  signal transduction histidine kinase  24.44 
 
 
2693 aa  44.7  0.0005  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6532  signal transduction histidine kinase  33.33 
 
 
368 aa  44.3  0.0006  Methylobacterium sp. 4-46  Bacteria  normal  0.0793858  normal  0.366363 
 
 
-
 
NC_013223  Dret_1522  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.28 
 
 
147 aa  44.3  0.0006  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1173  signal transduction histidine kinase  33.33 
 
 
240 aa  43.9  0.0007  Caulobacter sp. K31  Bacteria  normal  0.171534  normal  0.123801 
 
 
-
 
NC_007498  Pcar_2710  hypothetical protein  25.84 
 
 
744 aa  43.5  0.001  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0072  serine-protein kinase  27.83 
 
 
169 aa  43.1  0.001  Dinoroseobacter shibae DFL 12  Bacteria  normal  hitchhiker  0.00642578 
 
 
-
 
NC_009972  Haur_2188  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.1 
 
 
142 aa  42.7  0.001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_2079  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.74 
 
 
152 aa  43.1  0.001  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.000225228 
 
 
-
 
NC_011884  Cyan7425_2234  signal transduction histidine kinase  24.18 
 
 
1676 aa  43.1  0.001  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.900765 
 
 
-
 
NC_007512  Plut_1367  putative anti-sigma regulatory factor (serine/threonine protein kinase)  27.21 
 
 
145 aa  42.4  0.002  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.646925 
 
 
-
 
NC_007802  Jann_4052  putative anti-sigma regulatory factor (serine/threonine protein kinase)  27 
 
 
170 aa  42.4  0.002  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2872  signal transduction histidine kinase  39.58 
 
 
362 aa  42.4  0.002  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.401413  normal  0.23232 
 
 
-
 
NC_007948  Bpro_3509  signal transduction histidine kinase  29.46 
 
 
439 aa  42.4  0.002  Polaromonas sp. JS666  Bacteria  normal  normal  0.2468 
 
 
-
 
NC_009921  Franean1_0970  signal transduction histidine kinase  43.75 
 
 
520 aa  42.7  0.002  Frankia sp. EAN1pec  Bacteria  normal  0.183244  normal  0.273355 
 
 
-
 
NC_013132  Cpin_0116  signal transduction histidine kinase  29.13 
 
 
698 aa  42.4  0.002  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_2056  anti-sigma regulatory factor  25.56 
 
 
143 aa  42.7  0.002  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.773482  n/a   
 
 
-
 
NC_013216  Dtox_2065  anti-sigma regulatory factor, serine/threonine protein kinase  23.08 
 
 
146 aa  42.7  0.002  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000202652  normal 
 
 
-
 
NC_009487  SaurJH9_2102  serine-protein kinase RsbW  25 
 
 
159 aa  42  0.003  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.178488  n/a   
 
 
-
 
NC_009632  SaurJH1_2139  serine-protein kinase RsbW  25 
 
 
159 aa  42  0.003  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_1806  signal transduction histidine kinase  23.33 
 
 
681 aa  42  0.003  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.286721 
 
 
-
 
NC_011831  Cagg_2065  putative anti-sigma regulatory factor, serine/threonine protein kinase  24.19 
 
 
143 aa  41.6  0.003  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011832  Mpal_1924  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.5 
 
 
492 aa  41.6  0.003  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.184744 
 
 
-
 
NC_013501  Rmar_0590  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.73 
 
 
150 aa  42  0.003  Rhodothermus marinus DSM 4252  Bacteria  normal  0.26678  n/a   
 
 
-
 
NC_011884  Cyan7425_3899  signal transduction histidine kinase  26.32 
 
 
613 aa  41.2  0.004  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.796516 
 
 
-
 
NC_013132  Cpin_0119  signal transduction histidine kinase  26.79 
 
 
757 aa  41.2  0.004  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_002976  SERP1678  serine-protein kinase RsbW  26.42 
 
 
159 aa  41.2  0.005  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_2286  multisensor signal transduction histidine kinase  25.81 
 
 
834 aa  41.2  0.005  Methanococcoides burtonii DSM 6242  Archaea  normal  0.461732  n/a   
 
 
-
 
NC_009616  Tmel_1313  putative anti-sigma regulatory factor, serine/threonine protein kinase  19.83 
 
 
135 aa  41.2  0.005  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_0118  signal transduction histidine kinase  30.43 
 
 
774 aa  41.2  0.005  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.844509  normal 
 
 
-
 
NC_008009  Acid345_2317  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.76 
 
 
155 aa  40.8  0.006  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.128595  normal  0.13523 
 
 
-
 
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