| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0118 |
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| Symbol | |
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| ID | 8356217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 143343 |
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| End bp | 145667 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644962262 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_003119822 |
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| Protein GI | 256419169 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.844509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGGT TACTATTGCT TATCTGTTTA GTAACAATAG GTGTTTTGCA ATGTGTTGCA
CAGGATAAGA CGCCACTACA GGATAAACAG CTCAGCGTCT TGCTGATGAA GGAAAAGCCG
GACGAAAAGG ATATTAAACA GCTTTTTACC TGGGGAGAAC AATACATTAA CAGACCCGGC
ATATTGCCAA AAGATTTAGA TAGCAGCATT CTATGCGCTA ATAAGATACT CAATGCCGGT
ATAAAACAGC AAAATGACGG CTGGCAGGGA CAGGCCTGTA TGATCTATTC CAAGATATTC
AGGGAAAAAG GAGAACAGAC AAGAGGGAAT GAATATGCCC GGAAGGCGCA AAAGCTATTT
CAACGTGCCG GCCAGGATGA ATACCAGGGA GATGCATATG TCGAATTGTC AAGATACATT
TCTTATGAGG ATGCAGAAAA CTTACCGGAA GCCATACATG ATCAGGAAAT GGCGGTTAAA
CTGTATGAAA AAACAGGTAA TCACAAGAAA CAGGCAGAGA CACTTACCTT ACTGGCCGAC
TATGTAATCG GTATCCCGGA TATGTACAGA GCGATTGACC TCTTGCACCA GGCAGAAGTA
GTATATAAGA AGATCGGTTA TACCCATCTG GGTGCTGTAT ATGATCTCCT CGGACTGGCA
TACAGATCGA CCGGCGAGTT AAGCACGGCC CTTGACTACC AGCTGCGGGC CATTAAAGAC
ATAGAAGCAG TTGGTGATAC GACACAGTCG CTGTCTACGG CCTATAATGG TCTGGGTATG
ATGTACTATG AGATGGAGAC TTTTGAACAG TCAGTCGATG CTTACAATAA AGCATTTACG
ATTGCTGAAA AACTGAAGGA TACTGCCTCC ATGCAATATA TCACCGGTAA TCTTGCCAAC
TCCTATATCC GCCTTAAAAA CGGTGTTGCC GCCTTACGTG TATTGAAGCG GGAAGAGCGC
TTTTTCCCTC CGGCAGGGGC CCGGCCTAAA ATATTGCTGG AGGTAGCCAT GGTACACGCA
TATCTGGCAG AGGACAAAGC GGACGCAGCA CGCCCTTATA TCGCCAGGAT CGTTGAAACA
GAGAAAACTA TGGACCGGAA CGATATAGGG AGATTTCACC TGCTGACTGC TACTGCGACC
TTCTATTATG TGTCAAAACA ATATGAAAAG ACGATCCGCG AATGTGAAGA AGTAGGTTAT
ATCACAAAGA AATATAACAT GCTGGGCCCG GAGGTAAGAA ACTATCGTTT GTGGTACAAA
GCAGATTCTG CCAGAGGAGA TTTAGCTGCT GCTATCCGGC ATTTTCAGTT GTATAAGTTT
TATAGCGATT CGTTGTTCAG TGTCAGGAAA ACCAGTCAGC TTAACCAGCT ACAGGTAAAG
TTCGATACTG AAAAGAAAGA CCAGGCCCTG CAGCTAAAAC AGAAAAGTAT AGAATTGCTG
ACCAGAGACA GTCAGCTGCA AAAAGCAGAA TTAAGAAGGG CCAGATTCAC CCGGAATGTG
ATCATTCTGG GGGCAGTCAT GCTGATCATC GTCCTTTTGC TGGGGTATAA CCGTTACCAG
CTGCGACTAC GTAGTAACCG TCAGCTCAAG GTACAGCAGG ATGAAATTAA TCAGCAGAAT
CTCTCCCTGC AGGCGCTGAT CTCCTCACAA CATAAACTGC TGGAAGAAAA GGAATGGTTA
GTAAAAGAGA TTCATCACCG GGTAAAGAAT AACCTCCAGA TTGTTATGAG CCTGTTGAAT
ACACAGGCGG CTTTCCTGGA TGACAAAGAC GCCCTGAATG CGATCAGGGA GAGCCGTTTT
CGGATGCAGG CGATTTCCCT GATTCACCAT AAACTCTATC AGTCAGAAAA TATGGCCCTG
ATCGATATCA ACGTCTATAT TCACGAACTG ATCCATTTCC TGCAGGATGG CTTTACAGGC
GCCAGCAGGA TCCGGTTTGA TATGCAGATA GCCCCTGTAA AGCTGGATGT GTCGCAGGCG
GTGCCTATCG GACTGATTCT GAATGAAGCG ATTACCAATG CGATCAAATA CGCATTTACT
GATAATGGTA CTATATTGAT TTCCCTGAAA TTTACCGGAC TGAATCAGCT TACACTGGTG
ATAGCAGATA ACGGTAAAGG ATTTGCGATG AATGCTGTCA CAGGTGTCGG AAAATCAATG
GGACTGATGC TGATGCACAC CCTGAGTGAA CAACTGGATG GCGCCCTGGA TATCCAGAGT
GAAAATGGTG TGGTAATAAC AGTCAACTTC AGGTATCAGG AGCCTGAATC AACAGAAGAA
ACAGCGGAAT CAACACTGAC GTCCTCCTAC GGGATCATGT CTTAA
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| Protein sequence | MNRLLLLICL VTIGVLQCVA QDKTPLQDKQ LSVLLMKEKP DEKDIKQLFT WGEQYINRPG
ILPKDLDSSI LCANKILNAG IKQQNDGWQG QACMIYSKIF REKGEQTRGN EYARKAQKLF
QRAGQDEYQG DAYVELSRYI SYEDAENLPE AIHDQEMAVK LYEKTGNHKK QAETLTLLAD
YVIGIPDMYR AIDLLHQAEV VYKKIGYTHL GAVYDLLGLA YRSTGELSTA LDYQLRAIKD
IEAVGDTTQS LSTAYNGLGM MYYEMETFEQ SVDAYNKAFT IAEKLKDTAS MQYITGNLAN
SYIRLKNGVA ALRVLKREER FFPPAGARPK ILLEVAMVHA YLAEDKADAA RPYIARIVET
EKTMDRNDIG RFHLLTATAT FYYVSKQYEK TIRECEEVGY ITKKYNMLGP EVRNYRLWYK
ADSARGDLAA AIRHFQLYKF YSDSLFSVRK TSQLNQLQVK FDTEKKDQAL QLKQKSIELL
TRDSQLQKAE LRRARFTRNV IILGAVMLII VLLLGYNRYQ LRLRSNRQLK VQQDEINQQN
LSLQALISSQ HKLLEEKEWL VKEIHHRVKN NLQIVMSLLN TQAAFLDDKD ALNAIRESRF
RMQAISLIHH KLYQSENMAL IDINVYIHEL IHFLQDGFTG ASRIRFDMQI APVKLDVSQA
VPIGLILNEA ITNAIKYAFT DNGTILISLK FTGLNQLTLV IADNGKGFAM NAVTGVGKSM
GLMLMHTLSE QLDGALDIQS ENGVVITVNF RYQEPESTEE TAESTLTSSY GIMS
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