Gene Franean1_0970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0970 
Symbol 
ID5669384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1132911 
End bp1134473 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content72% 
IMG OID641239898 
Productsignal transduction histidine kinase 
Protein accessionYP_001505332 
Protein GI158312824 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.183244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.273355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCTGT CGGGCGTCAC GTCGGCGAGC GTACGGCGCA TTCCGGCCCG GCCGCCCGGC 
ACGCCCACCA CGGCGTCTGG CAGTCTGCGT CCCGTGGGAA CCCTCGCCGA CGCCCTGCGA
GCGAGCACCG ATCTCAGCGG CGACGACATC GACCATCTCC ATGCGCTCGT CGCGGACTGG
GCCCTGCTCG CCGATCTGTC CTTCGCGGAC CTGCTGCTGC TTGTCCCGGT GCGGTCCGGC
TCGGTGCGGG CGGGGCACGC CGGCGGCATG GAGTTCCAGG TCGTCGCGCA GGTACGTCCC
ACGACCGGAC CCACCGCGTA TCACAACGAC GAGGTCGGCA GTGTCGTCAT CAACCGGTGG
GTCGTGCAGA ACGCCTGGCG CGAGCACCGG ATCGCGCGGG AGGGTGAGCC TGAGTGGGAC
GGCGGGGTGC CGGTGCGCAC CGAGGCGATC CCGGTGCGCC ACGGCGACCG GGTGATCGCC
GTCCTGGCCC GGGACACCAA CCTCGCGACG ACCCGGACGC CGAGCGCGCT GGAGTCCGCC
TACCTGCAGG GCGCGAACAA CCTGGCCCTG ATGATCGCCG AGGGCGCGTT CCCGTTCCGG
GGCAGCTCCG CCGAGCTGCC CGAGGCGCCG CGGGTCGGTG ACGGCATGAT GCGCCTCGAC
GGCGCCGGCA AGGTGATCTT CGCCAGCCCG AACGCGCTGT CGGCGTACCG CCGGCTCGGC
CACACCGGGA ACGTCACCGG CGAGGACCTG CGCACCGTGC ACCGCGCGCT CAACCTGCCG
GCCACGACGC CCGCGGTCTG GCACGCGATC AGCCGGCGCC GGCCGGTCGA GGTCGAGATC
GAGGTGGGCA GCACGGTCGT GCTGCTGCGG GCCATCCCGC TCTTCCCCGG CGCGATCCGC
GAGGTGCTGG TCCTCGTCCG CGACGTCTCG GAGCTGCGGC GGCGGGAGGC CCAGCTGCTG
AGCAAGGACG CGACGATCCG GGAGATCCAC CACCGGGTCA AGAACAACCT GCAGACCGTG
GCGGCGCTGC TGCGCCTGCA GATGCGCCGG ACGAAGGCGG ACGAGGCCCG CGACGCGCTG
CGCGAGTCGG TGCGCCGGGT GACCTCGATC GCCGTCGTCC ACGAGACGCT CTCCCAGACG
CTGGGGGAGT CTGTCCCGTT CGACGAGATC GCCGACCAGA TCACCTCGGT GACTGTCGAC
CTCGCGTCGA CCGGGACCCG CGCGACGACC AGGCGGATCG GGTCGTTCGG CCGGCTTTCG
GGCGAGCTCG CCACGCCGTT GGCCCTTGTG CTCTCGGAAC TTCTGCAGAA TGCTGTCGAA
CATGCGTTCG ATGGATCGTC GGGAGCGATC GAGCTCCGCG TGCGGCGCGC CGAGGACCGC
CTCGACGTCG TGGTCGCCGA CGACGGCGCC GGCCTGCCGG ACGACTTCCA GCTCGAGCAC
TCACCCCGGC TCGGGCTGCA GATCGTCCGT CAGCTGGTGC TGGGCGAGAT GCGCGGGACC
ATCCGGCTGC AGGCCGGTCC GGCACGAGGG ACCGAGGCGC TCCTGTCGAT CCCACTTTCT
TGA
 
Protein sequence
MVLSGVTSAS VRRIPARPPG TPTTASGSLR PVGTLADALR ASTDLSGDDI DHLHALVADW 
ALLADLSFAD LLLLVPVRSG SVRAGHAGGM EFQVVAQVRP TTGPTAYHND EVGSVVINRW
VVQNAWREHR IAREGEPEWD GGVPVRTEAI PVRHGDRVIA VLARDTNLAT TRTPSALESA
YLQGANNLAL MIAEGAFPFR GSSAELPEAP RVGDGMMRLD GAGKVIFASP NALSAYRRLG
HTGNVTGEDL RTVHRALNLP ATTPAVWHAI SRRRPVEVEI EVGSTVVLLR AIPLFPGAIR
EVLVLVRDVS ELRRREAQLL SKDATIREIH HRVKNNLQTV AALLRLQMRR TKADEARDAL
RESVRRVTSI AVVHETLSQT LGESVPFDEI ADQITSVTVD LASTGTRATT RRIGSFGRLS
GELATPLALV LSELLQNAVE HAFDGSSGAI ELRVRRAEDR LDVVVADDGA GLPDDFQLEH
SPRLGLQIVR QLVLGEMRGT IRLQAGPARG TEALLSIPLS