Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0970 |
Symbol | |
ID | 5669384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1132911 |
End bp | 1134473 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641239898 |
Product | signal transduction histidine kinase |
Protein accession | YP_001505332 |
Protein GI | 158312824 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.183244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.273355 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCTGT CGGGCGTCAC GTCGGCGAGC GTACGGCGCA TTCCGGCCCG GCCGCCCGGC ACGCCCACCA CGGCGTCTGG CAGTCTGCGT CCCGTGGGAA CCCTCGCCGA CGCCCTGCGA GCGAGCACCG ATCTCAGCGG CGACGACATC GACCATCTCC ATGCGCTCGT CGCGGACTGG GCCCTGCTCG CCGATCTGTC CTTCGCGGAC CTGCTGCTGC TTGTCCCGGT GCGGTCCGGC TCGGTGCGGG CGGGGCACGC CGGCGGCATG GAGTTCCAGG TCGTCGCGCA GGTACGTCCC ACGACCGGAC CCACCGCGTA TCACAACGAC GAGGTCGGCA GTGTCGTCAT CAACCGGTGG GTCGTGCAGA ACGCCTGGCG CGAGCACCGG ATCGCGCGGG AGGGTGAGCC TGAGTGGGAC GGCGGGGTGC CGGTGCGCAC CGAGGCGATC CCGGTGCGCC ACGGCGACCG GGTGATCGCC GTCCTGGCCC GGGACACCAA CCTCGCGACG ACCCGGACGC CGAGCGCGCT GGAGTCCGCC TACCTGCAGG GCGCGAACAA CCTGGCCCTG ATGATCGCCG AGGGCGCGTT CCCGTTCCGG GGCAGCTCCG CCGAGCTGCC CGAGGCGCCG CGGGTCGGTG ACGGCATGAT GCGCCTCGAC GGCGCCGGCA AGGTGATCTT CGCCAGCCCG AACGCGCTGT CGGCGTACCG CCGGCTCGGC CACACCGGGA ACGTCACCGG CGAGGACCTG CGCACCGTGC ACCGCGCGCT CAACCTGCCG GCCACGACGC CCGCGGTCTG GCACGCGATC AGCCGGCGCC GGCCGGTCGA GGTCGAGATC GAGGTGGGCA GCACGGTCGT GCTGCTGCGG GCCATCCCGC TCTTCCCCGG CGCGATCCGC GAGGTGCTGG TCCTCGTCCG CGACGTCTCG GAGCTGCGGC GGCGGGAGGC CCAGCTGCTG AGCAAGGACG CGACGATCCG GGAGATCCAC CACCGGGTCA AGAACAACCT GCAGACCGTG GCGGCGCTGC TGCGCCTGCA GATGCGCCGG ACGAAGGCGG ACGAGGCCCG CGACGCGCTG CGCGAGTCGG TGCGCCGGGT GACCTCGATC GCCGTCGTCC ACGAGACGCT CTCCCAGACG CTGGGGGAGT CTGTCCCGTT CGACGAGATC GCCGACCAGA TCACCTCGGT GACTGTCGAC CTCGCGTCGA CCGGGACCCG CGCGACGACC AGGCGGATCG GGTCGTTCGG CCGGCTTTCG GGCGAGCTCG CCACGCCGTT GGCCCTTGTG CTCTCGGAAC TTCTGCAGAA TGCTGTCGAA CATGCGTTCG ATGGATCGTC GGGAGCGATC GAGCTCCGCG TGCGGCGCGC CGAGGACCGC CTCGACGTCG TGGTCGCCGA CGACGGCGCC GGCCTGCCGG ACGACTTCCA GCTCGAGCAC TCACCCCGGC TCGGGCTGCA GATCGTCCGT CAGCTGGTGC TGGGCGAGAT GCGCGGGACC ATCCGGCTGC AGGCCGGTCC GGCACGAGGG ACCGAGGCGC TCCTGTCGAT CCCACTTTCT TGA
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Protein sequence | MVLSGVTSAS VRRIPARPPG TPTTASGSLR PVGTLADALR ASTDLSGDDI DHLHALVADW ALLADLSFAD LLLLVPVRSG SVRAGHAGGM EFQVVAQVRP TTGPTAYHND EVGSVVINRW VVQNAWREHR IAREGEPEWD GGVPVRTEAI PVRHGDRVIA VLARDTNLAT TRTPSALESA YLQGANNLAL MIAEGAFPFR GSSAELPEAP RVGDGMMRLD GAGKVIFASP NALSAYRRLG HTGNVTGEDL RTVHRALNLP ATTPAVWHAI SRRRPVEVEI EVGSTVVLLR AIPLFPGAIR EVLVLVRDVS ELRRREAQLL SKDATIREIH HRVKNNLQTV AALLRLQMRR TKADEARDAL RESVRRVTSI AVVHETLSQT LGESVPFDEI ADQITSVTVD LASTGTRATT RRIGSFGRLS GELATPLALV LSELLQNAVE HAFDGSSGAI ELRVRRAEDR LDVVVADDGA GLPDDFQLEH SPRLGLQIVR QLVLGEMRGT IRLQAGPARG TEALLSIPLS
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