80 homologs were found in PanDaTox collection
for query gene Dret_1522 on replicon NC_013223
Organism: Desulfohalobium retbaense DSM 5692



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013223  Dret_1522  putative anti-sigma regulatory factor, serine/threonine protein kinase  100 
 
 
147 aa  300  4.0000000000000003e-81  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_2468  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.99 
 
 
147 aa  73.6  0.0000000000008  Geobacter bemidjiensis Bem  Bacteria  normal  0.0214018  n/a   
 
 
-
 
NC_008148  Rxyl_2664  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.85 
 
 
139 aa  70.5  0.000000000007  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1749  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.33 
 
 
147 aa  70.1  0.000000000009  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_2452  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.41 
 
 
147 aa  60.8  0.000000006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2161  anti-sigma-factor antagonist  32.41 
 
 
250 aa  60.1  0.00000001  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1426  rsbW protein, putative  29.37 
 
 
149 aa  57.8  0.00000004  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2331  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.64 
 
 
151 aa  57.4  0.00000007  Rhodothermus marinus DSM 4252  Bacteria  normal  0.571842  n/a   
 
 
-
 
NC_008609  Ppro_2661  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.69 
 
 
151 aa  56.2  0.0000001  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0789133  n/a   
 
 
-
 
NC_011831  Cagg_2555  anti-sigma-factor antagonist  28.71 
 
 
249 aa  56.6  0.0000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2065  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.45 
 
 
143 aa  54.7  0.0000005  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_4032  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.37 
 
 
155 aa  54.3  0.0000006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1195  anti-sigma-factor antagonist  29.05 
 
 
269 aa  53.1  0.000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.123525  normal 
 
 
-
 
NC_007484  Noc_2977  anti-sigma regulatory factor (Ser/Thr protein kinase  32.04 
 
 
141 aa  52.8  0.000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_1087  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.07 
 
 
141 aa  52.4  0.000002  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_4099  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.5 
 
 
147 aa  52  0.000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.256347  normal  0.1124 
 
 
-
 
NC_007796  Mhun_0063  putative anti-sigma regulatory factor (serine/threonine protein kinase)  28.17 
 
 
140 aa  51.6  0.000003  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.0713993 
 
 
-
 
NC_007517  Gmet_1228  putative anti-sigma regulatory factor (serine/threonine protein kinase)  31.13 
 
 
144 aa  51.6  0.000003  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.011235 
 
 
-
 
NC_002977  MCA1685  anti-sigma B factor  34.34 
 
 
142 aa  51.6  0.000003  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2139  serine-protein kinase RsbW  27.03 
 
 
159 aa  50.8  0.000005  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2102  serine-protein kinase RsbW  27.03 
 
 
159 aa  50.8  0.000005  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.178488  n/a   
 
 
-
 
NC_009616  Tmel_1313  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.67 
 
 
135 aa  50.1  0.00001  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3487  serine-protein kinase RsbW  26.21 
 
 
162 aa  49.7  0.00001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014210  Ndas_2582  putative signal transduction histidine kinase  28.87 
 
 
150 aa  48.9  0.00002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0114014 
 
 
-
 
NC_009972  Haur_4167  cyclic nucleotide-binding protein  28.15 
 
 
570 aa  48.1  0.00004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_1160  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.3 
 
 
138 aa  48.1  0.00004  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.620968  normal 
 
 
-
 
NC_011884  Cyan7425_0700  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.59 
 
 
136 aa  47.8  0.00005  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2399  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.71 
 
 
142 aa  47.8  0.00005  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.477606 
 
 
-
 
NC_009051  Memar_2469  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.73 
 
 
135 aa  47.4  0.00007  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_011313  VSAL_II0326  hypothetical protein  27.48 
 
 
146 aa  47  0.00008  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0299  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.03 
 
 
147 aa  47  0.00009  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2043  putative anti-sigma regulatory factor, serine/threonine protein kinase  24.32 
 
 
141 aa  45.8  0.0002  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000388253  n/a   
 
 
-
 
NC_013510  Tcur_4525  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.25 
 
 
130 aa  45.8  0.0002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0902  serine-protein kinase RsbW  26.03 
 
 
160 aa  45.8  0.0002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.954937  n/a   
 
 
-
 
NC_011773  BCAH820_1067  serine-protein kinase RsbW  26.24 
 
 
160 aa  45.1  0.0003  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.13388e-38 
 
 
-
 
NC_005945  BAS0927  serine-protein kinase RsbW  26.24 
 
 
160 aa  45.1  0.0003  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0991  serine-protein kinase RsbW  26.24 
 
 
160 aa  45.1  0.0003  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_3034  putative anti-sigma regulatory factor, serine/threonine protein kinase  22.86 
 
 
155 aa  44.7  0.0004  Chloroflexus aggregans DSM 9485  Bacteria  normal  decreased coverage  0.00000275353 
 
 
-
 
NC_014210  Ndas_1650  putative signal transduction histidine kinase  26.8 
 
 
150 aa  45.1  0.0004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0223546  normal 
 
 
-
 
NC_013440  Hoch_0209  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.68 
 
 
186 aa  45.1  0.0004  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK0895  serine-protein kinase RsbW  26.24 
 
 
160 aa  44.3  0.0005  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1032  serine-protein kinase RsbW  26.24 
 
 
160 aa  44.3  0.0005  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0912  serine-protein kinase RsbW  26.24 
 
 
160 aa  44.3  0.0005  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.0000281084  n/a   
 
 
-
 
NC_011772  BCG9842_B4271  serine-protein kinase RsbW  26.24 
 
 
160 aa  44.3  0.0006  Bacillus cereus G9842  Bacteria  normal  0.0304057  hitchhiker  0.00223112 
 
 
-
 
NC_013889  TK90_1874  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.28 
 
 
137 aa  44.3  0.0006  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.122382  normal 
 
 
-
 
NC_011658  BCAH187_A1158  serine-protein kinase RsbW  26.24 
 
 
160 aa  44.3  0.0006  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1085  serine-protein kinase RsbW  26.24 
 
 
160 aa  43.9  0.0007  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1584  putative anti-sigma regulatory factor, serine/threonine protein kinase  24.64 
 
 
141 aa  43.9  0.0007  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2650  putative anti-sigma regulatory factor, serine/threonine protein kinase  24.64 
 
 
141 aa  43.9  0.0007  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4432  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.73 
 
 
149 aa  43.5  0.0008  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2188  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.7 
 
 
142 aa  43.9  0.0008  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0150  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.57 
 
 
180 aa  43.5  0.001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.460194 
 
 
-
 
NC_010483  TRQ2_0194  putative anti-sigma regulatory factor, serine/threonine protein kinase  22.9 
 
 
136 aa  43.1  0.001  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_0396  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.21 
 
 
137 aa  42.7  0.002  Mycobacterium sp. JLS  Bacteria  normal  0.456804  normal  0.188282 
 
 
-
 
NC_009486  Tpet_0196  putative anti-sigma regulatory factor, serine/threonine protein kinase  21.26 
 
 
136 aa  42.7  0.002  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3443  putative anti-sigma regulatory factor (Ser/Thr protein kinase)  26.21 
 
 
147 aa  42.4  0.002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0106512  normal 
 
 
-
 
NC_007333  Tfu_0177  hypothetical protein  28.8 
 
 
147 aa  42.4  0.002  Thermobifida fusca YX  Bacteria  normal  0.160815  n/a   
 
 
-
 
NC_002977  MCA1666  sensor histidine kinase  29.01 
 
 
142 aa  42  0.002  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0417  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.21 
 
 
137 aa  42.7  0.002  Mycobacterium sp. KMS  Bacteria  normal  0.233306  normal 
 
 
-
 
NC_007493  RSP_1500  anti-sigma regulatory kinase  28.57 
 
 
180 aa  42.4  0.002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1014  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.81 
 
 
147 aa  42.4  0.002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.000121242  n/a   
 
 
-
 
NC_008146  Mmcs_0408  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.21 
 
 
137 aa  42.7  0.002  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2527  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.71 
 
 
147 aa  42.4  0.002  Xanthobacter autotrophicus Py2  Bacteria  normal  0.557848  normal 
 
 
-
 
NC_009972  Haur_1422  anti-sigma-factor antagonist  31.43 
 
 
250 aa  42.7  0.002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0065  putative anti-sigma regulatory factor, serine/threonine protein kinase  23.66 
 
 
146 aa  42.7  0.002  Ruegeria sp. TM1040  Bacteria  normal  0.459983  normal 
 
 
-
 
NC_014210  Ndas_2770  putative signal transduction histidine kinase  25.77 
 
 
150 aa  41.6  0.003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.416371  normal 
 
 
-
 
NC_013385  Adeg_0862  anti-sigma regulatory factor, serine/threonine protein kinase  30 
 
 
142 aa  41.6  0.003  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4441  protein serine phosphatase with GAF(s) sensor(s)  34 
 
 
792 aa  42  0.003  Haliangium ochraceum DSM 14365  Bacteria  normal  0.794262  normal 
 
 
-
 
NC_011769  DvMF_2441  putative anti-sigma regulatory factor, serine/threonine protein kinase  30 
 
 
138 aa  42  0.003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008312  Tery_4818  putative anti-sigma regulatory factor, serine/threonine protein kinase  21.55 
 
 
140 aa  42  0.003  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3862  signal transduction histidine kinase  28.8 
 
 
532 aa  42  0.003  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0203  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.14 
 
 
142 aa  41.6  0.004  Halorhodospira halophila SL1  Bacteria  normal  0.530407  n/a   
 
 
-
 
NC_002976  SERP1678  serine-protein kinase RsbW  26.85 
 
 
159 aa  41.6  0.004  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_5013  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.6 
 
 
141 aa  41.2  0.005  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0976  hypothetical protein  25.27 
 
 
158 aa  40.8  0.006  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0072  serine-protein kinase  25.2 
 
 
169 aa  40.8  0.007  Dinoroseobacter shibae DFL 12  Bacteria  normal  hitchhiker  0.00642578 
 
 
-
 
NC_014210  Ndas_1873  putative signal transduction histidine kinase  24.74 
 
 
149 aa  40.4  0.007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_1393  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.47 
 
 
159 aa  40.4  0.009  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.132217  normal  0.754718 
 
 
-
 
NC_011832  Mpal_1924  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.48 
 
 
492 aa  40  0.01  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.184744 
 
 
-
 
NC_007413  Ava_0663  putative anti-sigma regulatory factor (Ser/Thr protein kinase)  25 
 
 
142 aa  40  0.01  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00575622  normal  0.0631773 
 
 
-
 
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