Gene Pcar_2710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2710 
Symbol 
ID3725415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3163741 
End bp3165975 
Gene Length2235 bp 
Protein Length744 aa 
Translation table11 
GC content54% 
IMG OID637752320 
Producthypothetical protein 
Protein accessionYP_358116 
Protein GI77920301 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones78 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACGA TTTTAGCCAT TGAAGGCGTT GGGCACGACG TTGAAGAACT TCAAGAACTT 
TTACGCAATC ACGGATATGA CATCAGAACC ATAACCGAAA GCTCCGCGCA GGATGAACGG
CAGCAATATG AGCGGAATGT TCTTGAAAAT GTCCCCATCG GCATGTTCCG GTTCTCCCTC
GATGGAAAAC TGCTGGAGGC CAATCAGACT CTGGCGGATA TGTGTAAATA TGATTCGCCG
AAGCAGATGG TGGCGATGGT CAACGGCGGG GAGGGTGGCG GGTTCATTCA TGCGAATCCT
TTCCGGAGTC AACAGGTCAT CGCCATGGCC TTGCAATCTG ATGACTGGCA GAGTTTTGAA
GGACGCTTTC GATGTAAGGA CGGCAGCTTC ATCGATACCT GCCTACGTTT TCGCCGGGTT
CCCCATGCGC AGGATCAGGT TGAGGGCTTC GCTGAGGATA TTACCGAGCG CAAGCGGATC
GACGAGGCGC TGCGGTTTAC CCAGTACGTC GTGGAAAATA CAGCGGATCA GGCGTTCTGG
CTGACGGAGG ATGCCAAGGT TTTTTATGTC AATGACGCGG CTTGTCGCGC CCTGGGGTAC
CGACGCGAAG AACTCATCGG CATGTCTATT CACGAGTTCG ATCCGGCCTA TCCCATCAAA
GACTACAGCC TGAACTGGGA AAAACTGCGG CCCGATGGTT CGCGCATCAT AGAAACCTGG
CATCGGACCA AAGGCGGCAG GGTCTATCCC GTTGAAGTGC GCATCAACCA TGTGGAATTC
GATGGCAAGG AGTATCATTG CACTTTTGTT ACGGATATCT CCAGGCGCAG AGCCACCGAA
ACCATCTTGC GCGAGAGTGA AAATCGCTAT CGGCAACTGA TGGAGATGCT GCCCATCGCG
GCTTATACCA CCGACGCCGA TGGCCGGATC ACCTTTTACA ACCGCAATGC GGCTGAACTC
TGGGGCCGCA AACCCGAACT GAACAAAGAG CTCTGGTGCG GTTCCTTTCG TTTGTGGTAC
CCCGATGGCC GGCCCATGGC CTTCGATGCT TGTCCCATGG CCAAGACCCT GAAACAGGGC
AAGCGATTTC AGGGGCAGGA AGTGCTCATC GAGAGGGAAC AAGACGGGTA TGCCCATGTG
GTTGCCTACC CCGAGCCTCT CTACGATGCC GACGGAAATC TGATAGGGGC TCTTAACCTG
CTGGTCGATA TCACTGTCCG CAAGCAGGTC GAACAGCAAC TGCTGCAGGC CAACCTGGTG
GTTGAAAACA GCCCGGTGGT GTTGTTCCGG TGGAAGGCCG AACCCGGGTG GCCGGTCGTT
CTGGTGACCA AAAACATTAC CCAGTTCGGT TATGAACCGG AAGAATTCCT TTCCGGCAAG
CGGATGTTCG CTTCCATTAT TCATCCTGCA GACCGGGAGC GGGTAGCACG GGAGGTTGAA
GTATTTGCGG CCCGCGGTGT CGACCGGTTT GAACAGCAGT ATCGGATCCT CGGCAGAGGG
GGGAAGGTCT GCTGGATCAG TGACCAGACC AATGCCGAGC GGGATGAAGA GGGGCAGGTA
ACCCATTATG AAGGGATTGT TATCGACATC AGCGAACGCA AACATGCCGA AGAACGTATC
AAGGCGTCGC TGGTCGAAAA GGAGGTCCTG CTCAAAGAGA TCCACCACCG GGTGAAAAAT
AATCTCCAGG TCGTATCGAG CCTGTTATAT CTGCAGGCGC AAAAGCTTCA CGATCCCGAG
GCCAAAACCC TCTTTGCCGA GAGTCAGAGT CGCATCTGCT CCATGGCGTT GGCTCATGAG
CAGCTCTATC AATCGAAAAA CCTTGCCGAT ATCAGTTTGC TAGACTATGT GCAAAGCTTG
GTGTCGCATG TAAAGCAAAC CTTTATGTCG CCGCAATCCG TCATTGACTG CAAAGTCGAT
GTTGATGACG GCGTTCTCGA TATCGAAAAG GTGGTTCCTT GCGGTCTTTT GATCACGGAA
CTCCTCTCCA ATGCTTTGAA GCATGCTTTT CCCGACGGGA CTTGCGGCTC GATCAAGGTG
GAAATTACCC GCCAAAATGG CAGCGTGAAC TTGTGTGTCG CGGATGACGG AATCGGTCTG
CCTGCCGGTT TCGATTACCG CAAGGCCGAA ACGCTGGGAC TGCAGCTGGT CTGCGCGTTG
GTTCAACAGC TCGACGGGAG CTTGTCGGTG CAAAGTCGCC GCGGTACCAG CTTTAATCTG
TCTTTCCCCG GCTAG
 
Protein sequence
MQTILAIEGV GHDVEELQEL LRNHGYDIRT ITESSAQDER QQYERNVLEN VPIGMFRFSL 
DGKLLEANQT LADMCKYDSP KQMVAMVNGG EGGGFIHANP FRSQQVIAMA LQSDDWQSFE
GRFRCKDGSF IDTCLRFRRV PHAQDQVEGF AEDITERKRI DEALRFTQYV VENTADQAFW
LTEDAKVFYV NDAACRALGY RREELIGMSI HEFDPAYPIK DYSLNWEKLR PDGSRIIETW
HRTKGGRVYP VEVRINHVEF DGKEYHCTFV TDISRRRATE TILRESENRY RQLMEMLPIA
AYTTDADGRI TFYNRNAAEL WGRKPELNKE LWCGSFRLWY PDGRPMAFDA CPMAKTLKQG
KRFQGQEVLI EREQDGYAHV VAYPEPLYDA DGNLIGALNL LVDITVRKQV EQQLLQANLV
VENSPVVLFR WKAEPGWPVV LVTKNITQFG YEPEEFLSGK RMFASIIHPA DRERVAREVE
VFAARGVDRF EQQYRILGRG GKVCWISDQT NAERDEEGQV THYEGIVIDI SERKHAEERI
KASLVEKEVL LKEIHHRVKN NLQVVSSLLY LQAQKLHDPE AKTLFAESQS RICSMALAHE
QLYQSKNLAD ISLLDYVQSL VSHVKQTFMS PQSVIDCKVD VDDGVLDIEK VVPCGLLITE
LLSNALKHAF PDGTCGSIKV EITRQNGSVN LCVADDGIGL PAGFDYRKAE TLGLQLVCAL
VQQLDGSLSV QSRRGTSFNL SFPG