Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2710 |
Symbol | |
ID | 3725415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 3163741 |
End bp | 3165975 |
Gene Length | 2235 bp |
Protein Length | 744 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637752320 |
Product | hypothetical protein |
Protein accession | YP_358116 |
Protein GI | 77920301 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 78 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAACGA TTTTAGCCAT TGAAGGCGTT GGGCACGACG TTGAAGAACT TCAAGAACTT TTACGCAATC ACGGATATGA CATCAGAACC ATAACCGAAA GCTCCGCGCA GGATGAACGG CAGCAATATG AGCGGAATGT TCTTGAAAAT GTCCCCATCG GCATGTTCCG GTTCTCCCTC GATGGAAAAC TGCTGGAGGC CAATCAGACT CTGGCGGATA TGTGTAAATA TGATTCGCCG AAGCAGATGG TGGCGATGGT CAACGGCGGG GAGGGTGGCG GGTTCATTCA TGCGAATCCT TTCCGGAGTC AACAGGTCAT CGCCATGGCC TTGCAATCTG ATGACTGGCA GAGTTTTGAA GGACGCTTTC GATGTAAGGA CGGCAGCTTC ATCGATACCT GCCTACGTTT TCGCCGGGTT CCCCATGCGC AGGATCAGGT TGAGGGCTTC GCTGAGGATA TTACCGAGCG CAAGCGGATC GACGAGGCGC TGCGGTTTAC CCAGTACGTC GTGGAAAATA CAGCGGATCA GGCGTTCTGG CTGACGGAGG ATGCCAAGGT TTTTTATGTC AATGACGCGG CTTGTCGCGC CCTGGGGTAC CGACGCGAAG AACTCATCGG CATGTCTATT CACGAGTTCG ATCCGGCCTA TCCCATCAAA GACTACAGCC TGAACTGGGA AAAACTGCGG CCCGATGGTT CGCGCATCAT AGAAACCTGG CATCGGACCA AAGGCGGCAG GGTCTATCCC GTTGAAGTGC GCATCAACCA TGTGGAATTC GATGGCAAGG AGTATCATTG CACTTTTGTT ACGGATATCT CCAGGCGCAG AGCCACCGAA ACCATCTTGC GCGAGAGTGA AAATCGCTAT CGGCAACTGA TGGAGATGCT GCCCATCGCG GCTTATACCA CCGACGCCGA TGGCCGGATC ACCTTTTACA ACCGCAATGC GGCTGAACTC TGGGGCCGCA AACCCGAACT GAACAAAGAG CTCTGGTGCG GTTCCTTTCG TTTGTGGTAC CCCGATGGCC GGCCCATGGC CTTCGATGCT TGTCCCATGG CCAAGACCCT GAAACAGGGC AAGCGATTTC AGGGGCAGGA AGTGCTCATC GAGAGGGAAC AAGACGGGTA TGCCCATGTG GTTGCCTACC CCGAGCCTCT CTACGATGCC GACGGAAATC TGATAGGGGC TCTTAACCTG CTGGTCGATA TCACTGTCCG CAAGCAGGTC GAACAGCAAC TGCTGCAGGC CAACCTGGTG GTTGAAAACA GCCCGGTGGT GTTGTTCCGG TGGAAGGCCG AACCCGGGTG GCCGGTCGTT CTGGTGACCA AAAACATTAC CCAGTTCGGT TATGAACCGG AAGAATTCCT TTCCGGCAAG CGGATGTTCG CTTCCATTAT TCATCCTGCA GACCGGGAGC GGGTAGCACG GGAGGTTGAA GTATTTGCGG CCCGCGGTGT CGACCGGTTT GAACAGCAGT ATCGGATCCT CGGCAGAGGG GGGAAGGTCT GCTGGATCAG TGACCAGACC AATGCCGAGC GGGATGAAGA GGGGCAGGTA ACCCATTATG AAGGGATTGT TATCGACATC AGCGAACGCA AACATGCCGA AGAACGTATC AAGGCGTCGC TGGTCGAAAA GGAGGTCCTG CTCAAAGAGA TCCACCACCG GGTGAAAAAT AATCTCCAGG TCGTATCGAG CCTGTTATAT CTGCAGGCGC AAAAGCTTCA CGATCCCGAG GCCAAAACCC TCTTTGCCGA GAGTCAGAGT CGCATCTGCT CCATGGCGTT GGCTCATGAG CAGCTCTATC AATCGAAAAA CCTTGCCGAT ATCAGTTTGC TAGACTATGT GCAAAGCTTG GTGTCGCATG TAAAGCAAAC CTTTATGTCG CCGCAATCCG TCATTGACTG CAAAGTCGAT GTTGATGACG GCGTTCTCGA TATCGAAAAG GTGGTTCCTT GCGGTCTTTT GATCACGGAA CTCCTCTCCA ATGCTTTGAA GCATGCTTTT CCCGACGGGA CTTGCGGCTC GATCAAGGTG GAAATTACCC GCCAAAATGG CAGCGTGAAC TTGTGTGTCG CGGATGACGG AATCGGTCTG CCTGCCGGTT TCGATTACCG CAAGGCCGAA ACGCTGGGAC TGCAGCTGGT CTGCGCGTTG GTTCAACAGC TCGACGGGAG CTTGTCGGTG CAAAGTCGCC GCGGTACCAG CTTTAATCTG TCTTTCCCCG GCTAG
|
Protein sequence | MQTILAIEGV GHDVEELQEL LRNHGYDIRT ITESSAQDER QQYERNVLEN VPIGMFRFSL DGKLLEANQT LADMCKYDSP KQMVAMVNGG EGGGFIHANP FRSQQVIAMA LQSDDWQSFE GRFRCKDGSF IDTCLRFRRV PHAQDQVEGF AEDITERKRI DEALRFTQYV VENTADQAFW LTEDAKVFYV NDAACRALGY RREELIGMSI HEFDPAYPIK DYSLNWEKLR PDGSRIIETW HRTKGGRVYP VEVRINHVEF DGKEYHCTFV TDISRRRATE TILRESENRY RQLMEMLPIA AYTTDADGRI TFYNRNAAEL WGRKPELNKE LWCGSFRLWY PDGRPMAFDA CPMAKTLKQG KRFQGQEVLI EREQDGYAHV VAYPEPLYDA DGNLIGALNL LVDITVRKQV EQQLLQANLV VENSPVVLFR WKAEPGWPVV LVTKNITQFG YEPEEFLSGK RMFASIIHPA DRERVAREVE VFAARGVDRF EQQYRILGRG GKVCWISDQT NAERDEEGQV THYEGIVIDI SERKHAEERI KASLVEKEVL LKEIHHRVKN NLQVVSSLLY LQAQKLHDPE AKTLFAESQS RICSMALAHE QLYQSKNLAD ISLLDYVQSL VSHVKQTFMS PQSVIDCKVD VDDGVLDIEK VVPCGLLITE LLSNALKHAF PDGTCGSIKV EITRQNGSVN LCVADDGIGL PAGFDYRKAE TLGLQLVCAL VQQLDGSLSV QSRRGTSFNL SFPG
|
| |