More than 300 homologs were found in PanDaTox collection
for query gene Swol_0614 on replicon NC_008346
Organism: Syntrophomonas wolfei subsp. wolfei str. Goettingen



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008346  Swol_0614  anti-sigma F factor  100 
 
 
148 aa  303  6e-82  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0862  anti-sigma regulatory factor, serine/threonine protein kinase  51.47 
 
 
142 aa  147  4e-35  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3441  anti-sigma F factor  50 
 
 
145 aa  143  7.0000000000000006e-34  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2065  anti-sigma regulatory factor, serine/threonine protein kinase  49.28 
 
 
146 aa  143  7.0000000000000006e-34  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000202652  normal 
 
 
-
 
NC_007644  Moth_1497  anti-sigma F factor  50 
 
 
148 aa  143  8.000000000000001e-34  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_1104  anti-sigma F factor  51.85 
 
 
148 aa  142  1e-33  Desulfotomaculum reducens MI-1  Bacteria  normal  0.860331  n/a   
 
 
-
 
NC_010320  Teth514_1558  anti-sigma F factor  49.29 
 
 
143 aa  141  4e-33  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1225  putative anti-sigma regulatory factor, serine/threonine protein kinase  45.95 
 
 
148 aa  140  5e-33  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.00856956  n/a   
 
 
-
 
NC_009012  Cthe_0119  anti-sigma F factor  48.23 
 
 
149 aa  127  5.0000000000000004e-29  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2285  anti-sigma F factor  44.37 
 
 
141 aa  127  6e-29  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0373  anti-sigma F factor  46.81 
 
 
146 aa  126  1.0000000000000001e-28  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_2251  anti-sigma F factor  43.97 
 
 
146 aa  124  6e-28  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0477  anti-sigma F factor  46.85 
 
 
157 aa  120  4e-27  Clostridium phytofermentans ISDg  Bacteria  normal  0.899963  n/a   
 
 
-
 
NC_013205  Aaci_1745  anti-sigma regulatory factor, serine/threonine protein kinase  42.96 
 
 
153 aa  120  6e-27  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4183  anti-sigma F factor  42.45 
 
 
146 aa  119  9.999999999999999e-27  Bacillus cereus B4264  Bacteria  normal  0.0790038  n/a   
 
 
-
 
NC_008262  CPR_2021  anti-sigma F factor  46.04 
 
 
140 aa  119  9.999999999999999e-27  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B1055  anti-sigma F factor  42.45 
 
 
146 aa  119  9.999999999999999e-27  Bacillus cereus G9842  Bacteria  normal  normal  0.0411626 
 
 
-
 
NC_003909  BCE_4143  anti-sigma F factor  41.73 
 
 
146 aa  119  1.9999999999999998e-26  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00316995  n/a   
 
 
-
 
NC_005945  BAS3984  anti-sigma F factor  41.73 
 
 
146 aa  119  1.9999999999999998e-26  Bacillus anthracis str. Sterne  Bacteria  normal  0.132565  n/a   
 
 
-
 
NC_005957  BT9727_3814  anti-sigma F factor  41.73 
 
 
146 aa  119  1.9999999999999998e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3830  anti-sigma F factor  41.73 
 
 
146 aa  119  1.9999999999999998e-26  Bacillus cereus E33L  Bacteria  normal  0.0386677  n/a   
 
 
-
 
NC_007530  GBAA_4295  anti-sigma F factor  41.73 
 
 
146 aa  119  1.9999999999999998e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.65439  n/a   
 
 
-
 
NC_009674  Bcer98_2772  anti-sigma F factor  41.73 
 
 
146 aa  118  1.9999999999999998e-26  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0313076  n/a   
 
 
-
 
NC_008261  CPF_2306  anti-sigma F factor  46.04 
 
 
140 aa  119  1.9999999999999998e-26  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4095  anti-sigma F factor  41.73 
 
 
146 aa  119  1.9999999999999998e-26  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  3.69426e-22 
 
 
-
 
NC_010184  BcerKBAB4_3904  anti-sigma F factor  41.73 
 
 
146 aa  119  1.9999999999999998e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4206  anti-sigma F factor  41.73 
 
 
146 aa  119  1.9999999999999998e-26  Bacillus cereus AH187  Bacteria  unclonable  0.00000000134887  n/a   
 
 
-
 
NC_010718  Nther_1662  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.96 
 
 
146 aa  107  7.000000000000001e-23  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.503488  normal  0.167313 
 
 
-
 
NC_011899  Hore_07010  putative anti-sigma regulatory factor, serine/threonine protein kinase  41.98 
 
 
143 aa  106  9.000000000000001e-23  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1681  anti-sigma F factor  45.07 
 
 
154 aa  97.1  7e-20  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3487  serine-protein kinase RsbW  30.61 
 
 
162 aa  69.3  0.00000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011661  Dtur_0911  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.83 
 
 
290 aa  64.7  0.0000000004  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1085  serine-protein kinase RsbW  28 
 
 
160 aa  64.3  0.0000000005  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0912  serine-protein kinase RsbW  28 
 
 
160 aa  63.9  0.0000000006  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.0000281084  n/a   
 
 
-
 
NC_006274  BCZK0895  serine-protein kinase RsbW  28 
 
 
160 aa  63.9  0.0000000006  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2139  serine-protein kinase RsbW  28.57 
 
 
159 aa  63.5  0.0000000009  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2102  serine-protein kinase RsbW  28.57 
 
 
159 aa  63.5  0.0000000009  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.178488  n/a   
 
 
-
 
NC_002976  SERP1678  serine-protein kinase RsbW  28.19 
 
 
159 aa  63.2  0.000000001  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0902  serine-protein kinase RsbW  27.33 
 
 
160 aa  63.2  0.000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.954937  n/a   
 
 
-
 
NC_014165  Tbis_0476  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.17 
 
 
134 aa  63.2  0.000000001  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS0927  serine-protein kinase RsbW  27.33 
 
 
160 aa  62.4  0.000000002  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0991  serine-protein kinase RsbW  27.33 
 
 
160 aa  62.4  0.000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1067  serine-protein kinase RsbW  27.33 
 
 
160 aa  62.4  0.000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.13388e-38 
 
 
-
 
NC_011658  BCAH187_A1158  serine-protein kinase RsbW  28 
 
 
160 aa  62.8  0.000000002  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1032  serine-protein kinase RsbW  27.33 
 
 
160 aa  62.4  0.000000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4271  serine-protein kinase RsbW  27.33 
 
 
160 aa  62.8  0.000000002  Bacillus cereus G9842  Bacteria  normal  0.0304057  hitchhiker  0.00223112 
 
 
-
 
NC_013739  Cwoe_4563  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.13 
 
 
286 aa  61.6  0.000000004  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_5777  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.71 
 
 
155 aa  60.8  0.000000007  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_1473  putative anti-sigma regulatory factor (serine/threonine protein kinase)  32.2 
 
 
135 aa  58.9  0.00000002  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00187817  normal 
 
 
-
 
NC_008009  Acid345_2413  anti-sigma regulatory factor, serine/threonine protein kinase and phosphatase  30.28 
 
 
342 aa  59.3  0.00000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_2452  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.4 
 
 
147 aa  58.5  0.00000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2399  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.33 
 
 
142 aa  57.8  0.00000006  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.477606 
 
 
-
 
NC_012034  Athe_1291  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.33 
 
 
139 aa  56.6  0.0000001  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1812  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.58 
 
 
151 aa  57  0.0000001  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1422  integral membrane sensor signal transduction histidine kinase  29.75 
 
 
655 aa  55.8  0.0000002  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000000957952  n/a   
 
 
-
 
NC_013757  Gobs_2553  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.26 
 
 
324 aa  54.7  0.0000004  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3799  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.9 
 
 
140 aa  54.3  0.0000005  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000337486  n/a   
 
 
-
 
NC_007952  Bxe_B2488  putative anti-sigma regulatory factor (Ser/Thr protein kinase)  30.08 
 
 
129 aa  54.3  0.0000005  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_0334  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.36 
 
 
149 aa  53.9  0.0000007  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1624  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.37 
 
 
154 aa  53.1  0.000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1313  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.19 
 
 
135 aa  53.5  0.000001  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_1217  anti-sigma regulatory factor; Ser/Thr protein kinase  33.93 
 
 
141 aa  53.1  0.000001  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_4212  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.56 
 
 
144 aa  52.8  0.000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.797188  normal  0.229717 
 
 
-
 
NC_009767  Rcas_4100  putative anti-sigma regulatory factor, serine/threonine protein kinase  24.03 
 
 
154 aa  52.4  0.000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.39959  normal  0.110814 
 
 
-
 
NC_011831  Cagg_0737  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.84 
 
 
133 aa  52.4  0.000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_0179  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.12 
 
 
142 aa  52.8  0.000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_3034  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.6 
 
 
155 aa  52.4  0.000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  decreased coverage  0.00000275353 
 
 
-
 
NC_013037  Dfer_1673  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.1 
 
 
139 aa  52.4  0.000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.11126 
 
 
-
 
NC_013093  Amir_5361  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.77 
 
 
265 aa  52.8  0.000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0030  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.56 
 
 
144 aa  52.8  0.000002  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.786698 
 
 
-
 
NC_009523  RoseRS_3290  putative anti-sigma regulatory factor, serine/threonine protein kinase  24.03 
 
 
160 aa  52  0.000003  Roseiflexus sp. RS-1  Bacteria  normal  0.018648  normal 
 
 
-
 
NC_013739  Cwoe_3439  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.5 
 
 
136 aa  51.2  0.000005  Conexibacter woesei DSM 14684  Bacteria  normal  0.438455  normal 
 
 
-
 
NC_010622  Bphy_0132  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.74 
 
 
382 aa  51.2  0.000005  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0139  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.37 
 
 
140 aa  50.8  0.000006  Ruegeria sp. TM1040  Bacteria  normal  0.0189997  normal 
 
 
-
 
NC_009616  Tmel_0498  integral membrane sensor signal transduction histidine kinase  29.59 
 
 
399 aa  50.8  0.000006  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0477  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.53 
 
 
330 aa  50.8  0.000006  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_3765  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.95 
 
 
343 aa  50.8  0.000006  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.933404  normal  0.0854229 
 
 
-
 
NC_009972  Haur_0731  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.51 
 
 
139 aa  50.8  0.000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.993652  n/a   
 
 
-
 
NC_010718  Nther_0092  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.57 
 
 
144 aa  50.8  0.000007  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.305697  hitchhiker  0.00140915 
 
 
-
 
NC_009972  Haur_2684  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.02 
 
 
137 aa  50.8  0.000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0675  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.8 
 
 
133 aa  50.1  0.00001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.769358  normal  0.0108346 
 
 
-
 
NC_009523  RoseRS_3289  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.95 
 
 
147 aa  50.1  0.00001  Roseiflexus sp. RS-1  Bacteria  normal  0.0615968  normal 
 
 
-
 
NC_013061  Phep_2116  ATP-binding region ATPase domain protein  27.12 
 
 
137 aa  48.9  0.00002  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.538209 
 
 
-
 
NC_010483  TRQ2_1475  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.53 
 
 
321 aa  48.9  0.00002  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4972  ATP-binding region, ATPase-like  25.83 
 
 
152 aa  49.3  0.00002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1874  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.15 
 
 
137 aa  49.3  0.00002  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.122382  normal 
 
 
-
 
NC_011831  Cagg_3252  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.83 
 
 
139 aa  49.3  0.00002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_1429  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.53 
 
 
321 aa  48.9  0.00002  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0162  putative anti-sigma regulatory factor, serine/threonine protein kinase  28 
 
 
133 aa  49.3  0.00002  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1094  integral membrane sensor signal transduction histidine kinase  33.33 
 
 
364 aa  48.9  0.00003  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2795  putative anti-sigma regulatory factor, serine/threonine protein kinase  23.91 
 
 
139 aa  48.5  0.00003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4484  putative anti-sigma regulatory factor, serine/threonine protein kinase  22.3 
 
 
138 aa  48.9  0.00003  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.292037 
 
 
-
 
NC_010511  M446_2753  signal transduction histidine kinase  31.36 
 
 
325 aa  48.5  0.00003  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3337  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.07 
 
 
158 aa  48.1  0.00003  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0770  histidine kinase  30.99 
 
 
397 aa  48.5  0.00003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.102828  normal  0.523628 
 
 
-
 
NC_009718  Fnod_1087  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.69 
 
 
141 aa  48.5  0.00003  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3168  histidine kinase  33.33 
 
 
369 aa  48.9  0.00003  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010814  Glov_3408  integral membrane sensor signal transduction histidine kinase  36.46 
 
 
473 aa  48.1  0.00004  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_03690  histidine kinase  33.33 
 
 
398 aa  48.1  0.00004  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.156811 
 
 
-
 
NC_013235  Namu_2087  putative PAS/PAC sensor protein  25 
 
 
666 aa  47.8  0.00005  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00000976195  normal  0.0252685 
 
 
-
 
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