| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2061 |
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| Symbol | |
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| ID | 4283249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 2366572 |
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| End bp | 2368254 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638138943 |
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| Product | Na+-driven multidrug efflux pump-like protein |
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| Protein accession | YP_754726 |
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| Protein GI | 114567572 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.488699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGACC ACATTATTGC CGGACAGGTG TTGGGGAGTG ATGCACTGGC GGCGATGAGC
CTGGTGAATC CCCTGTTTTT TCTGTTAACC ACGCTGGGCA CTTTGGTTTG TGTGGGCTCT
TCCACGCTGG CCTCGGTTTC GATGGGGAGC GAAGACCGCA GTACCGCCAA CAAGCTTTTC
ACCCTTACCA TGCTGCTAAT TCTGCTGCTG GGCACTGTAT TCAGCATCGT AGGATTCATA
TTTATCGAAC CACTGGTAAA GCTCCTCAGC AACGATCCTG AACTTTATGA TCTGGTCTAT
GCCTATTGTC GGGGCTTAAT TCCGGGGGCT ATATGCATTA TGGCGGTATA CCTGCCGCTT
AACTATTTTC GGATTGAGGG CCGGGCTTTT CTGGGCATGA TTATGTTTTT AATCATGGCC
GCGCTGGATA TCATCCTTGA CCTGTGGTTT ACGGTGGTCA TGGGCATGGG CATGCTGGGA
CTGGCCTTGG CTACGGTTAT AAGCGCGTTG TTGGCCGTGG CTATAATGTC TCCGTTTCTT
TTTATCAAGG GGGGAGGATA TCGATTCGCG CCCATCGGCC AATCCTTGCG CCTGGTATAC
GCGATCGCTA TTACCGGTAG CCCCCCGGCG CTAAACAACC TGTACACCGT AGTCAGAACC
TTTGTATTGA ATATGCTCAT ACTGGCCGTA GGCGGACCGA TTGCCGTTGC TAGTTTTGCC
TTTGTCAACA GTGTCAACAC CCTGGCCCAG GCCATTATCT CCGGGATATC TCAGACCGTA
TCTCCGCTGG TGGGCGTTTT TTACGGTGAA CGCGATGTGC TGAGCATAAA AAAAGTGGTG
TTTTTAGCCT TCCGCTACGG CATCATAACC ATGGCGATAT TCAGTATTTC AATATCCCTG
TTGGCCAAAC CGATCTGTTT GGCGTTTAAT CTTAGTTCGC CCGAGCAGCT GCACATAGCA
GTACCGGCCC TGATCATATC TTCGATCAGT TTGCTGGGAG CAGTGGTAAA CAATATTTTC
GTATATTATT ACATGACAAT TGGCCGAACC AGTATTGCCA ACCGGATCAC TTTGTTCCGG
GGCTTTTTGT TCATTATTCC GGCCGCCGGT GCCATGGCTC AGGCCATGGG GATACTTGGC
ATATGGGCCG CCTTTTCCAT CAGCGAACTG CTCACCCTGC TGATGACTAT CCTTACGATC
AGAAAAACCT TGCTCAAGGA ACAGGATTTG CGCGGTTTAC TGTTGTTAAA TTATCGGGAT
GTTGCGGAAG GAAGGTTTAT TGCCTTTTCC GTTGACAGCA ATAACGAGTC GGTCTTGGAG
AGTTCAGATA AAATCAGCGA GTTCTGTACA TCCTGCAAGC TTAATTCCAA ACAATCCATG
GTCATAAGCT TGGCGATTGA AGAAATACTC CTGTTGATGG TACAGCACAT CTTTGCCGGC
AACAAAAATA AATCAATTGA TGTACGGATA TTTGTCCGGG ACGATGTCAC CACCATGCGC
TTCCGCTGTG CGGGCCGGAA ATTCAATCCC CTGGATTATT ACCAGCAGGC CATGGAGAAT
GCCGATACTT CCGAAGCCCT GGCCCTGGGT GAAAGCATGG GGCTCCAGAT GATTACCAAA
ATGACCAAAC AGGTGGATTA TACTACCAGC CTCGGTTTGA ACAACATTAT TATCAGAATC
TGA
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| Protein sequence | MVDHIIAGQV LGSDALAAMS LVNPLFFLLT TLGTLVCVGS STLASVSMGS EDRSTANKLF
TLTMLLILLL GTVFSIVGFI FIEPLVKLLS NDPELYDLVY AYCRGLIPGA ICIMAVYLPL
NYFRIEGRAF LGMIMFLIMA ALDIILDLWF TVVMGMGMLG LALATVISAL LAVAIMSPFL
FIKGGGYRFA PIGQSLRLVY AIAITGSPPA LNNLYTVVRT FVLNMLILAV GGPIAVASFA
FVNSVNTLAQ AIISGISQTV SPLVGVFYGE RDVLSIKKVV FLAFRYGIIT MAIFSISISL
LAKPICLAFN LSSPEQLHIA VPALIISSIS LLGAVVNNIF VYYYMTIGRT SIANRITLFR
GFLFIIPAAG AMAQAMGILG IWAAFSISEL LTLLMTILTI RKTLLKEQDL RGLLLLNYRD
VAEGRFIAFS VDSNNESVLE SSDKISEFCT SCKLNSKQSM VISLAIEEIL LLMVQHIFAG
NKNKSIDVRI FVRDDVTTMR FRCAGRKFNP LDYYQQAMEN ADTSEALALG ESMGLQMITK
MTKQVDYTTS LGLNNIIIRI
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