Gene Daro_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1990 
Symbol 
ID3570239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2142320 
End bp2142718 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content53% 
IMG OID637680461 
Productsensor histidine kinase 
Protein accessionYP_285206 
Protein GI71907619 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value0.415496 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.485112 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATC ATTTTACGGA CATTTCTGTC AGCGCGCGCC ATTCAGAATT ACCCGATTTG 
CATCGAATGC TCGCTGAACA CGCCAACCGA TTCGGCATTT CGGCCGACGA TGTTTTGCGC
CTGCAATTGT TAGCTGAGGA ATTGTTTATC AACACAATCT CTCATGGCTA CCGTGGCGAC
AGTGATGCCT CCATCCATCT GAGCCTGACC CGGAATGGCA ATGCGCTGCA TCTTTGTTAT
GAGGACAAGG CGCCGGCCTT TGACCCGACA AGAACACCCG AAAAGCAGGA GGCAGCAAGC
GACATCGGCG GCTTGGGCAT CTGCCTTATC CGGGGTATGT GCAAAAAGGT CCGCTACGAA
CGTCGAAACG ACAGCAACGT TATCGACATC GACCTTTAG
 
Protein sequence
MADHFTDISV SARHSELPDL HRMLAEHANR FGISADDVLR LQLLAEELFI NTISHGYRGD 
SDASIHLSLT RNGNALHLCY EDKAPAFDPT RTPEKQEAAS DIGGLGICLI RGMCKKVRYE
RRNDSNVIDI DL