Gene Haur_1422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1422 
Symbol 
ID5733330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1642884 
End bp1643636 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content53% 
IMG OID641278560 
Productanti-sigma-factor antagonist 
Protein accessionYP_001544194 
Protein GI159897947 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCAAA CCGCTGAACT TAAACTGCCA GGGCTGCTCG ATTCGCTCGG TGCCCTGTGT 
AAGTTTGCCT ATCAGGCAGC ACTTGATGCT GGGCTTAACG AACATACGGC GTGGGAAATT
GAATTGGCAG TTGATGAAGC TGCCACCAAT ATCATCCAAC ACGCCTACTC TGCTGAACGT
CCCGGTGATG TTCGCTTGGT CTGCGGACGC GATGGTAGCC GTTTTGTAGT ACGGCTGTTC
GATCGCGGGG TTCCTTTTGA TCCTGAAACT GTTCCTCCTC CAGATCTCAC CTCATCAATC
GAAACTCGCG AGGCTGGCGG CCTCGGAATG TATTTGATGG GCAGGATGAT GGATGATGTG
CAATTCAATT ACAATCCTGA AACTGGTGAA AACGAGTTAC ACATGAGTAA AATCGTTGGG
ACACGACTGC CCGAAGATGT GCGGGTTGTG CCAGTTCAAG GCCGGATTGA TGCCACGGCA
GCGCCAGCCT TAGCGACGAT TGTCCATGAG GCTGCCGAAA CTGGCGGGCG GCGCATCTTG
CTTGATCTTA CGGGCGTAAC CTTTTTAAGC AGCAGCGGTC TGCGGATTTT GCTGTTGTTG
GCTCGCGAAC TCAAAGGCTC CAACGGCGAA CTACGCTTGT GTTCATTACA ACCAGCGGTA
GCCGAGGTCT TTACCCTGAC AGGATTCACC CAAATCTTTA CCATTCACCG CACTCGTGAT
GAAGCGCTTG CAGCGTTGGC AGATGTTGAG TAA
 
Protein sequence
MAQTAELKLP GLLDSLGALC KFAYQAALDA GLNEHTAWEI ELAVDEAATN IIQHAYSAER 
PGDVRLVCGR DGSRFVVRLF DRGVPFDPET VPPPDLTSSI ETREAGGLGM YLMGRMMDDV
QFNYNPETGE NELHMSKIVG TRLPEDVRVV PVQGRIDATA APALATIVHE AAETGGRRIL
LDLTGVTFLS SSGLRILLLL ARELKGSNGE LRLCSLQPAV AEVFTLTGFT QIFTIHRTRD
EALAALADVE